RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Rcc1lQ9CYF5 461 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Mmp1aQ9EPL5 464 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Upk1bQ9Z2C6 260 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Kif26bQ7TNC6 2112 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Olfr209L7N1X3 305 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 OcmP51879 109 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Dnaja1P63037 397 aaKnown RBP21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Igfbp5Q07079 271 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Ripk1Q60855 656 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Rbbp4Q60972 425 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Vrk1Q80X41 440 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 RabifQ91X96 123 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Upk3bl1Q9D701 249 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Ca7Q9ERQ8 264 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Vmn2r91E9Q2U5 856 aa21.29■■□□□ 1
Upf3a-201ENSMUST00000043767 Vti1bO88384 232 aa21.29■■□□□ 1
Upf3a-201ENSMUST00000043767 Gsta2P10648 222 aa21.29■■□□□ 1
Upf3a-201ENSMUST00000043767 Pin1rt1Q3ULQ2 159 aa21.29■■□□□ 1
Upf3a-201ENSMUST00000043767 Nhlrc4Q3UP44 136 aa21.29■■□□□ 1
Upf3a-201ENSMUST00000043767 MagixQ4KL35 324 aa21.29■■□□□ 1
Upf3a-201ENSMUST00000043767 Olfr1364Q5SZS9 314 aa21.29■■□□□ 1
Upf3a-201ENSMUST00000043767 Runx1t1Q61909 577 aa21.29■■□□□ 1
Upf3a-201ENSMUST00000043767 Zic2Q62520 530 aa21.29■■□□□ 1
Upf3a-201ENSMUST00000043767 Gucd1Q8BZI6 239 aa21.29■■□□□ 1
Upf3a-201ENSMUST00000043767 Tmem221Q8K071 230 aa21.29■■□□□ 1
Upf3a-201ENSMUST00000043767 SdslQ8R238 329 aa21.29■■□□□ 1
Upf3a-201ENSMUST00000043767 Q8R3C1 574 aa21.29■■□□□ 1
Upf3a-201ENSMUST00000043767 Pex12Q8VC48 359 aa21.29■■□□□ 1
Upf3a-201ENSMUST00000043767 Mto1Q923Z3 669 aa21.29■■□□□ 1
Upf3a-201ENSMUST00000043767 Slc19a3Q99PL8 488 aa21.29■■□□□ 1
Upf3a-201ENSMUST00000043767 Rita1Q9D1H0 253 aa21.29■■□□□ 1
Upf3a-201ENSMUST00000043767 Defb5Q9EPV9 64 aa21.29■■□□□ 1
Upf3a-201ENSMUST00000043767 Rnf32Q9JIT1 368 aa21.29■■□□□ 1
Upf3a-201ENSMUST00000043767 Slc25a34A2ADF7 318 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Olfr618K7N6B3 318 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Dbil5O09035 87 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 H2-AaP01910 256 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 GfapP03995 430 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Cxcl10P17515 98 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Pcbp3P57722 371 aaKnown RBP21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Vipr1P97751 459 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Tie1Q06806 1134 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Lpar5Q149R9 372 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 RogdiQ3TDK6 287 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Tas2r106Q7M724 308 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Olfr1045Q7TR80 315 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Crls1Q80ZM8 303 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Fbxl14Q8BID8 400 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 NarsQ8BP47 559 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Pik3cbQ8BTI9 1064 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Lgi4Q8K1S1 537 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Olfr1047Q8VGS0 319 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Sesn3Q9CYP7 492 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Pex13Q9D0K1 405 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Bbs10Q9DBI2 713 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Cyp2d22Q9JKY7 500 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Adam25Q9R159 760 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Sult3a2G5E904 293 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Serpinb9cI7HJI5 387 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Psmb10O35955 273 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Slc22a8O88909 537 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Pcp2P12660 120 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Kcnk2P97438 426 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Nrsn2Q5HZK2 202 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Klhl13Q80TF4 654 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Tigd4Q8BUZ3 513 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Smco1Q8CEZ1 214 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Slc35b4Q8CIA5 331 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Aoc1Q8JZQ5 751 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Gpr1Q8K087 353 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Brinp1Q920P3 760 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Eif3mQ99JX4 374 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Cby3Q9CVN6 235 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Tex47Q9D5W8 253 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 Bod1lE9Q6J5 3032 aa21.28■■□□□ 1
Upf3a-201ENSMUST00000043767 2010106E10RikA2ANY3 279 aa21.27■■□□□ 1
Upf3a-201ENSMUST00000043767 Vmn1r184E9Q2N4 314 aa21.27■■□□□ 1
Upf3a-201ENSMUST00000043767 Zfp605E9QAH2 694 aa21.27■■□□□ 1
Upf3a-201ENSMUST00000043767 Vmn1r175K7N6T9 304 aa21.27■■□□□ 1
Upf3a-201ENSMUST00000043767 BcheQ03311 603 aa21.27■■□□□ 1
Upf3a-201ENSMUST00000043767 Gm10644Q3TZG3 87 aa21.27■■□□□ 1
Upf3a-201ENSMUST00000043767 Ctu2Q3U308 514 aa21.27■■□□□ 1
Upf3a-201ENSMUST00000043767 Olfr1275Q7TQY8 312 aa21.27■■□□□ 1
Upf3a-201ENSMUST00000043767 Phf11aQ8BVM9 293 aa21.27■■□□□ 1
Upf3a-201ENSMUST00000043767 Csnka2ipQ8CH19 720 aa21.27■■□□□ 1
Upf3a-201ENSMUST00000043767 Dtx2Q8R3P2 619 aa21.27■■□□□ 1
Upf3a-201ENSMUST00000043767 Chrm5Q920H4 532 aa21.27■■□□□ 1
Upf3a-201ENSMUST00000043767 Tmed10Q9D1D4 219 aaKnown RBP21.27■■□□□ 1
Upf3a-201ENSMUST00000043767 Popdc3Q9ES81 291 aa21.27■■□□□ 1
Upf3a-201ENSMUST00000043767 Pramef25A2ASI9 494 aa21.27■□□□□ 0.99
Upf3a-201ENSMUST00000043767 Olfr640E9Q7P5 314 aa21.27■□□□□ 0.99
Upf3a-201ENSMUST00000043767 Gm44G3UW88 330 aa21.27■□□□□ 0.99
Upf3a-201ENSMUST00000043767 Capns1O88456 269 aa21.27■□□□□ 0.99
Upf3a-201ENSMUST00000043767 ApodP51910 189 aa21.27■□□□□ 0.99
Upf3a-201ENSMUST00000043767 Vbp1P61759 196 aa21.27■□□□□ 0.99
Upf3a-201ENSMUST00000043767 Csnk2bP67871 215 aaKnown RBP21.27■□□□□ 0.99
Upf3a-201ENSMUST00000043767 MitfQ08874 526 aa21.27■□□□□ 0.99
Upf3a-201ENSMUST00000043767 Defb41Q30KP6 65 aa21.27■□□□□ 0.99
Upf3a-201ENSMUST00000043767 Vac14Q80WQ2 782 aa21.27■□□□□ 0.99
Upf3a-201ENSMUST00000043767 NagpaQ8BJ48 517 aa21.27■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms