RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ZNF721Q8TF20 911 aa9□□□□□ -0.97
PHGDH-215ENST00000641371 SLC41A3Q96GZ6 507 aa9□□□□□ -0.97
PHGDH-215ENST00000641371 Q96MT0 163 aa9□□□□□ -0.97
PHGDH-215ENST00000641371 CTRCQ99895 268 aa9□□□□□ -0.97
PHGDH-215ENST00000641371 ITPAQ9BY32 194 aa9□□□□□ -0.97
PHGDH-215ENST00000641371 POLR1BQ9H9Y6 1135 aa9□□□□□ -0.97
PHGDH-215ENST00000641371 TMEM9BQ9NQ34 198 aa9□□□□□ -0.97
PHGDH-215ENST00000641371 RXFP3Q9NSD7 469 aa9□□□□□ -0.97
PHGDH-215ENST00000641371 SNX5Q9Y5X3 404 aa9□□□□□ -0.97
PHGDH-215ENST00000641371 BDP1A6H8Y1 2624 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 A0A1W2PQD3 144 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 GXYLT2A0PJZ3 443 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 DPPA5A6NC42 116 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 SERINC4A6NH21 518 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 SNTNA6NMZ2 147 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 ZAR1LA6NP61 321 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 IDSB3KWA1 339 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 MEN1O00255 615 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 SEC24DO94855 1032 aaPredicted RBP8.99□□□□□ -0.97
PHGDH-215ENST00000641371 IGF2P01344 180 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 NAGAP17050 411 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 CRHBPP24387 322 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 EEF1B2P24534 225 aaKnown RBP8.99□□□□□ -0.97
PHGDH-215ENST00000641371 FPR3P25089 353 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 IL12BP29460 328 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 CLK3P49761 638 aaKnown RBP8.99□□□□□ -0.97
PHGDH-215ENST00000641371 PNLIPRP2P54317 469 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 COPZ1P61923 177 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 MVKQ03426 396 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 CD47Q08722 323 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 TARDBPQ13148 414 aaKnown RBP eCLIP8.99□□□□□ -0.97
PHGDH-215ENST00000641371 CDK5R2Q13319 367 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 RAPSNQ13702 412 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 EFR3AQ14156 821 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 MAD2L1BPQ15013 274 aaPredicted RBP8.99□□□□□ -0.97
PHGDH-215ENST00000641371 EBPQ15125 230 aaKnown RBP8.99□□□□□ -0.97
PHGDH-215ENST00000641371 NPTX1Q15818 432 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 VWA2Q5GFL6 755 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 CCNJQ5T5M9 372 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 PWWP2BQ6NUJ5 590 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 PGBD2Q6P3X8 592 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 NPSR1Q6W5P4 371 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 DGAT2L6Q6ZPD8 337 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 MBOAT2Q6ZWT7 520 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 WDR53Q7Z5U6 358 aaPredicted RBP8.99□□□□□ -0.97
PHGDH-215ENST00000641371 LACC1Q8IV20 430 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 NAXDQ8IW45 347 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 SLC34A3Q8N130 599 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 CLIP4Q8N3C7 705 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 BCORP1Q8N888 145 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 BMPERQ8N8U9 685 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 B3GNT7Q8NFL0 401 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 OR9Q2Q8NGE9 314 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.99□□□□□ -0.97
PHGDH-215ENST00000641371 DNAJA4Q8WW22 397 aaPredicted RBP8.99□□□□□ -0.97
PHGDH-215ENST00000641371 OSTF1Q92882 214 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 TSLPQ969D9 159 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 VMP1Q96GC9 406 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 LPAR4Q99677 370 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 BARD1Q99728 777 aaKnown RBP8.99□□□□□ -0.97
PHGDH-215ENST00000641371 SEMA4CQ9C0C4 833 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 B3GNT4Q9C0J1 378 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 OR8D2Q9GZM6 311 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 QRSL1Q9H0R6 528 aaKnown RBP8.99□□□□□ -0.97
PHGDH-215ENST00000641371 ADNPQ9H2P0 1102 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 C12orf10Q9HB07 376 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 PLCXD1Q9NUJ7 323 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 RPS6KB2Q9UBS0 482 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 FER1L5A0AVI2 2057 aa8.99□□□□□ -0.97
PHGDH-215ENST00000641371 MYOCOSA0A1B0GUC4 107 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 IRGMA1A4Y4 181 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 CPSF4LA6NMK7 179 aaKnown RBP8.98□□□□□ -0.97
PHGDH-215ENST00000641371 ZNF701M0R085 212 aaPredicted RBP8.98□□□□□ -0.97
PHGDH-215ENST00000641371 SLC1A7O00341 560 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 CHP2O43745 196 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 MITFO75030 526 aaPredicted RBP8.98□□□□□ -0.97
PHGDH-215ENST00000641371 SEMA7AO75326 666 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 RFPL3O75679 317 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 CSTAP01040 98 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 GASTP01350 101 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 CLPSP04118 112 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 TFAP2AP05549 437 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 JUNBP17275 347 aaPredicted RBP8.98□□□□□ -0.97
PHGDH-215ENST00000641371 TBXA2RP21731 343 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 SLC5A2P31639 672 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 ALDH3B2P48448 385 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 GSSP48637 474 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 TMED10P49755 219 aaKnown RBP8.98□□□□□ -0.97
PHGDH-215ENST00000641371 GPR143P51810 404 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 ZNF136P52737 540 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 SMSP52788 366 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 TUBA3CQ13748 450 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 LAPTM4AQ15012 233 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 OR1Q1Q15612 314 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 LPAL2Q16609 132 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 PDZK1Q5T2W1 519 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 DCAF12Q5T6F0 453 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 MEDAGQ5VYS4 303 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 SLX4IPQ5VYV7 408 aa8.98□□□□□ -0.97
PHGDH-215ENST00000641371 MRPL14Q6P1L8 145 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms