RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 MYOTQ9UBF9 498 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 NINQ8N4C6 2090 aa13.11□□□□□ -0.31
CLTCL1-212ENST00000622493 NPIPA5A0A0B4J1W7 369 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 CENPVL1A0A0U1RR11 272 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 LOC101059948A0A1B0GTJ6 334 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 CDC14CA4D256 554 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 SAC3D1A6NKF1 404 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 NPIPA7E9PJI5 369 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 M0R3H8 397 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 HS6ST1O60243 411 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 PRKNO60260 465 aaPredicted RBP13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 TSPAN2O60636 221 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 REM1O75628 298 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 DIRAS1O95057 198 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 HPP00738 406 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 NPIPA8P0DM63 369 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 FPR1P21462 350 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 TBXA2RP21731 343 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 F8A1P23610 371 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 RRM2P31350 389 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 ADH7P40394 386 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 HMGA2P52926 109 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 FGFBP1Q14512 234 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 RTP5Q14D33 572 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 PDZK1Q5T2W1 519 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 MRPL2Q5T653 305 aaKnown RBP13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 SHQ1Q6PI26 577 aaKnown RBP13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 ZNF605Q86T29 641 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 COMTD1Q86VU5 262 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 RAB43Q86YS6 212 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 EPHX4Q8IUS5 362 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 SLC15A4Q8N697 577 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 OR4C3Q8NH37 302 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 VANGL1Q8TAA9 524 aaPredicted RBP13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 GATA6Q92908 595 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 OMA1Q96E52 524 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 LMF1Q96S06 567 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 ZNF184Q99676 751 aaPredicted RBP13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 ACAD8Q9UKU7 415 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 SAMHD1Q9Y3Z3 626 aaKnown RBP13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 NPFFR2Q9Y5X5 522 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 DMXL1Q9Y485 3027 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 OR6C70A6NIJ9 312 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 TMEM200CA6NKL6 621 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 RASAL1O95294 804 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 NGFRP08138 427 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 LIPCP11150 499 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 HPGDP15428 266 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 OTX2P32243 289 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 IFNA8P32881 189 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 TMED10P49755 219 aaKnown RBP13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 RGS8P57771 180 aaPredicted RBP13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 SMIM11AP58511 58 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 CAMK2BQ13554 666 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 KLHL26Q53HC5 615 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 COLEC12Q5KU26 742 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 IZUMO2Q6UXV1 221 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 DEF8Q6ZN54 512 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 LACC1Q8IV20 430 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 KBTBD2Q8IY47 623 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 CBR4Q8N4T8 237 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 OR4D11Q8NGI4 311 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 KIAA1143Q96AT1 154 aaPredicted RBP13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 ADOQ96SZ5 270 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 POLR2J2Q9GZM3 115 aaKnown RBP13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 POLR2J3Q9H1A7 115 aaKnown RBP13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 RLIMQ9NVW2 624 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 SLC35A3Q9Y2D2 325 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 LYVE1Q9Y5Y7 322 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 U3KQV3 271 aa13.1□□□□□ -0.31
CLTCL1-212ENST00000622493 CEP250Q9BV73 2442 aa13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 CLDN24A6NM45 220 aa13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 TNFRSF11BO00300 401 aa13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 SCDO00767 359 aa13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 AP3D1O14617 1153 aa13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 PPM1BO75688 479 aa13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 UTS2O95399 124 aa13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 ENDOUP21128 410 aaKnown RBP13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 SPIBQ01892 262 aa13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 EFR3AQ14156 821 aa13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 RANBP3LQ86VV4 465 aaPredicted RBP13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 RBM45Q8IUH3 476 aaKnown RBP13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 ZNF614Q8N883 585 aa13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 SLC22A8Q8TCC7 542 aa13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 DHRS1Q96LJ7 313 aa13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 PRRC1Q96M27 445 aa13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 SLC29A1Q99808 456 aa13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 WFDC6Q9BQY6 131 aa13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 ZNF160Q9HCG1 818 aa13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 ACER3Q9NUN7 267 aa13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 P4HTMQ9NXG6 502 aa13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 TESMINQ9Y4I5 508 aa13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 AHCTF1Q8WYP5 2266 aa13.09□□□□□ -0.31
CLTCL1-212ENST00000622493 A0A1W2PQD3 144 aa13.08□□□□□ -0.32
CLTCL1-212ENST00000622493 SERINC4A6NH21 518 aa13.08□□□□□ -0.32
CLTCL1-212ENST00000622493 EIF4E1BA6NMX2 242 aaKnown RBP13.08□□□□□ -0.32
CLTCL1-212ENST00000622493 H3BNH8 94 aa13.08□□□□□ -0.32
CLTCL1-212ENST00000622493 J3KTA2 159 aa13.08□□□□□ -0.32
CLTCL1-212ENST00000622493 PDLIM1O00151 329 aa13.08□□□□□ -0.32
CLTCL1-212ENST00000622493 SOCS2O14508 198 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms