RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 PTPN18Q99952 460 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 QRSL1Q9H0R6 528 aaKnown RBP6.8□□□□□ -1.32
COLCA1-205ENST00000620864 FBRSQ9HAH7 460 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 ISYNA1Q9NPH2 558 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 SLC6A14Q9UN76 642 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 PIAS1O75925 651 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 EOMESO95936 686 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 CH25HO95992 272 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 BCKDHBP21953 392 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 ZNF92Q03936 586 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 PCLAFQ15004 111 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 DUSP6Q16828 381 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 BLOC1S3Q6QNY0 202 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 KLBQ86Z14 1044 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 HMCESQ96FZ2 354 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 ZNF586Q9NXT0 402 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 B4GALT7Q9UBV7 327 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 GJD2Q9UKL4 321 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 SLC22A7Q9Y694 548 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 A6NIZ1 184 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 K7EQM0 130 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 CLDN5O00501 218 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 EMC8O43402 210 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 PDGFAP04085 211 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 OSMP13725 252 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 ELK1P19419 428 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 RAP1BP61224 184 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 LCN6P62502 163 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 RAP1AP62834 184 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 POU4F3Q15319 338 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 Q5PR19 223 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 UBE2UQ5VVX9 321 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 AMIGO3Q86WK7 504 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 C12orf76Q8N812 135 aaPredicted RBP6.8□□□□□ -1.32
COLCA1-205ENST00000620864 OR4K14Q8NGD5 310 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 GPR148Q8TDV2 347 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 IL21RQ9HBE5 538 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 GOLGA2P5Q9HBQ8 144 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 CPNE7Q9UBL6 633 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 TRAV20A0A0B4J274 112 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 MROH6A6NGR9 719 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 OR51F1A6NGY5 319 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 CD8B2A6NJW9 211 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 MSTNO14793 375 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 CD8BP10966 210 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 RAB7AP51149 207 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 GBX1Q14549 363 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 FLYWCH1Q4VC44 716 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 CDCA2Q69YH5 1023 aaPredicted RBP6.8□□□□□ -1.32
COLCA1-205ENST00000620864 CYS1Q717R9 158 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 SERPINA12Q8IW75 414 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 ARL14EPQ8N8R7 260 aaPredicted RBP6.8□□□□□ -1.32
COLCA1-205ENST00000620864 PHOSPHO1Q8TCT1 267 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 HAS1Q92839 578 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 P2RY13Q9BPV8 354 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 TTYH3Q9C0H2 523 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 OCEL1Q9H607 264 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 METTL7AQ9H8H3 244 aa6.8□□□□□ -1.32
COLCA1-205ENST00000620864 C9JVG2 144 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 TXNDC12O95881 172 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 ATP1B2P14415 290 aaPredicted RBP6.79□□□□□ -1.32
COLCA1-205ENST00000620864 GATMP50440 423 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 UBE2G2P60604 165 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 TMEM35AQ53FP2 167 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 PDLIM3Q53GG5 364 aaPredicted RBP6.79□□□□□ -1.32
COLCA1-205ENST00000620864 ZNF678Q5SXM1 525 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 PLAG1Q6DJT9 500 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 UEVLDQ8IX04 471 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 OR4M1Q8NGD0 313 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 FBXW5Q969U6 566 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 GPR88Q9GZN0 384 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 LHPPQ9H008 270 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 ZNF395Q9H8N7 513 aaPredicted RBP6.79□□□□□ -1.32
COLCA1-205ENST00000620864 CARS2Q9HA77 564 aaKnown RBP6.79□□□□□ -1.32
COLCA1-205ENST00000620864 TMEM59LQ9UK28 342 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 SEC14L6B5MCN3 397 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 ICMTO60725 284 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 CYTIPO60759 359 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 PGCP20142 388 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 BAMBIQ13145 260 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 TMEM198Q66K66 360 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 GKN2Q86XP6 184 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 ZNF454Q8N9F8 522 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 C16orf78Q8WTQ4 265 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 NXPE3Q969Y0 559 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 WDR26Q9H7D7 661 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 NIT2Q9NQR4 276 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 SACM1LQ9NTJ5 587 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 PCDHGA7Q9Y5G6 932 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 B4GALT5O43286 388 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 TGFB1I1O43294 461 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 CRABP1P29762 137 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 KDELR2P33947 212 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 SOX2P48431 317 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 HYAL2Q12891 473 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 CNN3Q15417 329 aaKnown RBP6.79□□□□□ -1.32
COLCA1-205ENST00000620864 TATDN3Q17R31 274 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 FAM214AQ32MH5 1076 aa6.79□□□□□ -1.32
COLCA1-205ENST00000620864 PAN3Q58A45 887 aaKnown RBP6.79□□□□□ -1.32
COLCA1-205ENST00000620864 PAQR3Q6TCH7 311 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms