RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 PDZK1Q5T2W1 519 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 FNDC7Q5VTL7 733 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 ZNF836Q6ZNA1 936 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 FKBP9P1Q75LS8 142 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 PIWIL3Q7Z3Z3 882 aaKnown RBP11.03□□□□□ -0.64
CCDC57-216ENST00000582885 VTCN1Q7Z7D3 282 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 VRK2Q86Y07 508 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 SPACA3Q8IXA5 215 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 SMYD1Q8NB12 490 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 POGLUT1Q8NBL1 392 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 ASB15Q8WXK1 588 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 SLC47A1Q96FL8 570 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 C7orf34Q96L11 122 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 SGCZQ96LD1 299 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 ARHGDIGQ99819 225 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 ING2Q9H160 280 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 ZBTB20Q9HC78 741 aaPredicted RBP11.03□□□□□ -0.64
CCDC57-216ENST00000582885 IL1RAPQ9NPH3 570 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 WDR70Q9NW82 654 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 KLHL28Q9NXS3 571 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 PRDM4Q9UKN5 801 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 SLC35A3Q9Y2D2 325 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 CHST2Q9Y4C5 530 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 AP4S1Q9Y587 144 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 NCOR2Q9Y618 2525 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 FREM2Q5SZK8 3169 aa11.03□□□□□ -0.64
CCDC57-216ENST00000582885 MPDZO75970 2070 aa11.02□□□□□ -0.64
CCDC57-216ENST00000582885 FREM3P0C091 2139 aa11.02□□□□□ -0.64
CCDC57-216ENST00000582885 NPIPA5A0A0B4J1W7 369 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 CENPVL1A0A0U1RR11 272 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 SERINC4A6NH21 518 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 NPIPA7E9PJI5 369 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 H3BNH8 94 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 H3BNX3 289 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 MAN1A2O60476 641 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 ICOSLGO75144 302 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 OR6B1O95007 311 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 EPPINO95925 133 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 NPIPA8P0DM63 369 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 FCGR1AP12314 374 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 HPGDP15428 266 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 CLK3P49761 638 aaKnown RBP11.02□□□□□ -0.65
CCDC57-216ENST00000582885 ERFP50548 548 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 UCNP55089 124 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 FBXW4P57775 412 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 RPP38P78345 283 aaKnown RBP11.02□□□□□ -0.65
CCDC57-216ENST00000582885 SNTA1Q13424 505 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 NRF1Q16656 503 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 TBCELQ5QJ74 424 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 ABHD17BQ5VST6 288 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 BROXQ5VW32 411 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 FCRLBQ6BAA4 426 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 CCDC81Q6ZN84 652 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 ERMP1Q7Z2K6 904 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 MISPQ8IVT2 679 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 TMEM156Q8N614 296 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 SIRT6Q8N6T7 355 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 FAM71CQ8NEG0 241 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 PYDC1Q8WXC3 89 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 NTNG2Q96CW9 530 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 SEPHS2Q99611 448 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 RNF32Q9H0A6 362 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 STMN3Q9NZ72 180 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 ABI3Q9P2A4 366 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 SLC13A4Q9UKG4 626 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 AURKCQ9UQB9 309 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 SLC9A8Q9Y2E8 581 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 SH3GLB1Q9Y371 365 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 KCNMB2Q9Y691 235 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 IGF2RP11717 2491 aa11.02□□□□□ -0.65
CCDC57-216ENST00000582885 PTPRQQ9UMZ3 2332 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 PRAMEF25A6NGN4 478 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 DPM1O60762 260 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 CEACAM4O75871 244 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 DNAJB5O75953 348 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 KRT36O76013 467 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 IFNW1P05000 195 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 FABP3P05413 133 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 ITGA2P17301 1181 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 EVI2BP34910 448 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 HLCSP50747 726 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 TLE3Q04726 772 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 GLIPR1L2Q4G1C9 344 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 IQCCQ4KMZ1 466 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 MRPL2Q5T653 305 aaKnown RBP11.01□□□□□ -0.65
CCDC57-216ENST00000582885 AGAP7PQ5VUJ5 663 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 B3GNTL1Q67FW5 361 aaPredicted RBP11.01□□□□□ -0.65
CCDC57-216ENST00000582885 ISLR2Q6UXK2 745 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 APOOLQ6UXV4 268 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 LRRC69Q6ZNQ3 347 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 RTL4Q6ZR62 310 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 ZDHHC21Q8IVQ6 265 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 ZNF440Q8IYI8 595 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 BEST3Q8N1M1 668 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 CLIP4Q8N3C7 705 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 OR10Q1Q8NGQ4 319 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 NR4A3Q92570 626 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 AGAP4Q96P64 663 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 NODALQ96S42 347 aa11.01□□□□□ -0.65
CCDC57-216ENST00000582885 CHID1Q9BWS9 393 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms