RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 SAXO2Q658L1 398 aa25.15■■□□□ 1.62
SCARF1-207ENST00000573867 BHLHB9Q6PI77 547 aa25.15■■□□□ 1.62
SCARF1-207ENST00000573867 VPS37AQ8NEZ2 397 aa25.15■■□□□ 1.62
SCARF1-207ENST00000573867 OR9I1Q8NGQ6 314 aa25.15■■□□□ 1.62
SCARF1-207ENST00000573867 C1GALT1C1Q96EU7 318 aa25.15■■□□□ 1.62
SCARF1-207ENST00000573867 UBQLN4Q9NRR5 601 aa25.15■■□□□ 1.62
SCARF1-207ENST00000573867 AHRRA9YTQ3 701 aa25.14■■□□□ 1.62
SCARF1-207ENST00000573867 NPIPB9F8W1W9 429 aa25.14■■□□□ 1.62
SCARF1-207ENST00000573867 UBDO15205 165 aa25.14■■□□□ 1.62
SCARF1-207ENST00000573867 SLC22A3O75751 556 aa25.14■■□□□ 1.62
SCARF1-207ENST00000573867 CHRNB4P30926 498 aa25.14■■□□□ 1.62
SCARF1-207ENST00000573867 GSTA3Q16772 222 aa25.14■■□□□ 1.62
SCARF1-207ENST00000573867 DDX59Q5T1V6 619 aaKnown RBP eCLIP25.14■■□□□ 1.62
SCARF1-207ENST00000573867 PM20D2Q8IYS1 436 aa25.14■■□□□ 1.62
SCARF1-207ENST00000573867 MIPOL1Q8TD10 442 aa25.14■■□□□ 1.62
SCARF1-207ENST00000573867 CA5BP1Q8WTZ4 195 aa25.14■■□□□ 1.62
SCARF1-207ENST00000573867 SFXN2Q96NB2 322 aa25.14■■□□□ 1.62
SCARF1-207ENST00000573867 OR52E6Q96RD3 313 aa25.14■■□□□ 1.62
SCARF1-207ENST00000573867 UCK2Q9BZX2 261 aa25.14■■□□□ 1.62
SCARF1-207ENST00000573867 OR51I1Q9H343 314 aa25.14■■□□□ 1.62
SCARF1-207ENST00000573867 ZIM2Q9NZV7 527 aa25.14■■□□□ 1.62
SCARF1-207ENST00000573867 CENPEQ02224 2701 aa25.14■■□□□ 1.61
SCARF1-207ENST00000573867 PCNX3Q9H6A9 2034 aa25.13■■□□□ 1.61
SCARF1-207ENST00000573867 NDUFB5O43674 189 aa25.13■■□□□ 1.61
SCARF1-207ENST00000573867 CPN1P15169 458 aa25.13■■□□□ 1.61
SCARF1-207ENST00000573867 HK1P19367 917 aa25.13■■□□□ 1.61
SCARF1-207ENST00000573867 PTGER4P35408 488 aa25.13■■□□□ 1.61
SCARF1-207ENST00000573867 ARSKQ6UWY0 536 aa25.13■■□□□ 1.61
SCARF1-207ENST00000573867 LIX1LQ8IVB5 337 aa25.13■■□□□ 1.61
SCARF1-207ENST00000573867 GLB1L3Q8NCI6 653 aaPredicted RBP25.13■■□□□ 1.61
SCARF1-207ENST00000573867 CHDHQ8NE62 594 aaPredicted RBP25.13■■□□□ 1.61
SCARF1-207ENST00000573867 OR5M1Q8NGP8 315 aa25.13■■□□□ 1.61
SCARF1-207ENST00000573867 OR10Q1Q8NGQ4 319 aa25.13■■□□□ 1.61
SCARF1-207ENST00000573867 LILRB4Q8NHJ6 448 aa25.13■■□□□ 1.61
SCARF1-207ENST00000573867 ASB5Q8WWX0 329 aa25.13■■□□□ 1.61
SCARF1-207ENST00000573867 NEURL3Q96EH8 262 aa25.13■■□□□ 1.61
SCARF1-207ENST00000573867 MAGEB18Q96M61 343 aa25.13■■□□□ 1.61
SCARF1-207ENST00000573867 SDF2Q99470 211 aa25.13■■□□□ 1.61
SCARF1-207ENST00000573867 ZBTB18Q99592 522 aa25.13■■□□□ 1.61
SCARF1-207ENST00000573867 SLC35A5Q9BS91 424 aa25.13■■□□□ 1.61
SCARF1-207ENST00000573867 FAM90A27PA6NNH2 459 aa25.12■■□□□ 1.61
SCARF1-207ENST00000573867 SHISA8B8ZZ34 492 aa25.12■■□□□ 1.61
SCARF1-207ENST00000573867 OIP5O43482 229 aa25.12■■□□□ 1.61
SCARF1-207ENST00000573867 TGDSO95455 350 aa25.12■■□□□ 1.61
SCARF1-207ENST00000573867 EPPINO95925 133 aa25.12■■□□□ 1.61
SCARF1-207ENST00000573867 CHMP24386 653 aa25.12■■□□□ 1.61
SCARF1-207ENST00000573867 CLDN18P56856 261 aa25.12■■□□□ 1.61
SCARF1-207ENST00000573867 FUT5Q11128 374 aa25.12■■□□□ 1.61
SCARF1-207ENST00000573867 RIPPLY2Q5TAB7 128 aa25.12■■□□□ 1.61
SCARF1-207ENST00000573867 TNFAIP8L2Q6P589 184 aaPredicted RBP25.12■■□□□ 1.61
SCARF1-207ENST00000573867 PLXDC2Q6UX71 529 aa25.12■■□□□ 1.61
SCARF1-207ENST00000573867 NAXEQ8NCW5 288 aa25.12■■□□□ 1.61
SCARF1-207ENST00000573867 NPAS1Q99742 590 aa25.12■■□□□ 1.61
SCARF1-207ENST00000573867 TUBA1CQ9BQE3 449 aa25.12■■□□□ 1.61
SCARF1-207ENST00000573867 TCF7L2Q9NQB0 619 aa25.12■■□□□ 1.61
SCARF1-207ENST00000573867 SLC6A13Q9NSD5 602 aa25.12■■□□□ 1.61
SCARF1-207ENST00000573867 CACNA1CQ13936 2221 aa25.11■■□□□ 1.61
SCARF1-207ENST00000573867 A0A1W2PQD3 144 aa25.11■■□□□ 1.61
SCARF1-207ENST00000573867 NKX2-6A6NCS4 301 aa25.11■■□□□ 1.61
SCARF1-207ENST00000573867 CCDC154A6NI56 674 aa25.11■■□□□ 1.61
SCARF1-207ENST00000573867 SCDO00767 359 aa25.11■■□□□ 1.61
SCARF1-207ENST00000573867 GSNP06396 782 aa25.11■■□□□ 1.61
SCARF1-207ENST00000573867 OR12D1P0DN82 309 aa25.11■■□□□ 1.61
SCARF1-207ENST00000573867 ATP6V1C1P21283 382 aa25.11■■□□□ 1.61
SCARF1-207ENST00000573867 AQP5P55064 265 aa25.11■■□□□ 1.61
SCARF1-207ENST00000573867 SRYQ05066 204 aa25.11■■□□□ 1.61
SCARF1-207ENST00000573867 GANABQ14697 944 aaKnown RBP25.11■■□□□ 1.61
SCARF1-207ENST00000573867 FLYWCH1Q4VC44 716 aa25.11■■□□□ 1.61
SCARF1-207ENST00000573867 KLHL26Q53HC5 615 aa25.11■■□□□ 1.61
SCARF1-207ENST00000573867 RAET1LQ5VY80 246 aa25.11■■□□□ 1.61
SCARF1-207ENST00000573867 NSUN5P2Q63ZY6 315 aa25.11■■□□□ 1.61
SCARF1-207ENST00000573867 HEPHL1Q6MZM0 1159 aa25.11■■□□□ 1.61
SCARF1-207ENST00000573867 TNIP2Q8NFZ5 429 aa25.11■■□□□ 1.61
SCARF1-207ENST00000573867 RAB8BQ92930 207 aa25.11■■□□□ 1.61
SCARF1-207ENST00000573867 SH3YL1Q96HL8 342 aaPredicted RBP25.11■■□□□ 1.61
SCARF1-207ENST00000573867 PANX1Q96RD7 426 aa25.11■■□□□ 1.61
SCARF1-207ENST00000573867 PTGES2Q9H7Z7 377 aa25.11■■□□□ 1.61
SCARF1-207ENST00000573867 KCNE5Q9UJ90 142 aa25.11■■□□□ 1.61
SCARF1-207ENST00000573867 CENPVL1A0A0U1RR11 272 aa25.1■■□□□ 1.61
SCARF1-207ENST00000573867 OR2M5A3KFT3 312 aa25.1■■□□□ 1.61
SCARF1-207ENST00000573867 PRAMEF27A3QJZ7 478 aa25.1■■□□□ 1.61
SCARF1-207ENST00000573867 SOX30O94993 753 aa25.1■■□□□ 1.61
SCARF1-207ENST00000573867 ZNF708P17019 499 aa25.1■■□□□ 1.61
SCARF1-207ENST00000573867 GCKP35557 465 aa25.1■■□□□ 1.61
SCARF1-207ENST00000573867 TFF3Q07654 80 aa25.1■■□□□ 1.61
SCARF1-207ENST00000573867 TMEM44Q2T9K0 475 aa25.1■■□□□ 1.61
SCARF1-207ENST00000573867 AAGABQ6PD74 315 aa25.1■■□□□ 1.61
SCARF1-207ENST00000573867 ENPP6Q6UWR7 440 aa25.1■■□□□ 1.61
SCARF1-207ENST00000573867 DTNBP1Q96EV8 351 aa25.1■■□□□ 1.61
SCARF1-207ENST00000573867 TRIB1Q96RU8 372 aa25.1■■□□□ 1.61
SCARF1-207ENST00000573867 ARHGAP21Q5T5U3 1957 aa25.1■■□□□ 1.61
SCARF1-207ENST00000573867 POLR3GO15318 223 aaPredicted RBP25.09■■□□□ 1.61
SCARF1-207ENST00000573867 FCMRO60667 390 aa25.09■■□□□ 1.61
SCARF1-207ENST00000573867 HPGDP15428 266 aa25.09■■□□□ 1.61
SCARF1-207ENST00000573867 CEACAM8P31997 349 aaPredicted RBP25.09■■□□□ 1.61
SCARF1-207ENST00000573867 CHI3L1P36222 383 aaPredicted RBP25.09■■□□□ 1.61
SCARF1-207ENST00000573867 ATP12AP54707 1039 aa25.09■■□□□ 1.61
SCARF1-207ENST00000573867 CLDN15P56746 228 aa25.09■■□□□ 1.61
SCARF1-207ENST00000573867 ARHGAP11BQ3KRB8 267 aa25.09■■□□□ 1.61
SCARF1-207ENST00000573867 DNAJC14Q6Y2X3 702 aaPredicted RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms