RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 FAM221BA6H8Z2 402 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 HPGDSO60760 199 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 B4GALT2O60909 372 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 RFC3P40938 356 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 PAN3Q58A45 887 aaKnown RBP4.83□□□□□ -1.64
SMG1-211ENST00000565324 VARS2Q5ST30 1063 aaKnown RBP4.83□□□□□ -1.64
SMG1-211ENST00000565324 FAM122AQ96E09 287 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 LRIG1Q96JA1 1093 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 MCOLN1Q9GZU1 580 aa4.83□□□□□ -1.64
SMG1-211ENST00000565324 SLIT2O94813 1529 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 NEURL4Q96JN8 1562 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 E7ESA3 106 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 SCAMP2O15127 329 aaKnown RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 AHSGP02765 367 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 MMP2P08253 660 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 CDK4P11802 303 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 UNGP13051 313 aaPredicted RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 CLCNKBP51801 687 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 ARL16Q0P5N6 197 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 TIGD5Q53EQ6 642 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 UEVLDQ8IX04 471 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 C1orf127Q8N9H9 656 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 NHLRC2Q8NBF2 726 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 OR52E2Q8NGJ4 325 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 GPR152Q8TDT2 470 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 TOMM40LQ969M1 308 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 SHDQ96IW2 340 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 SPOCK3Q9BQ16 436 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 USB1Q9BQ65 265 aaKnown RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 SAP130Q9H0E3 1048 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 NIT2Q9NQR4 276 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 GRXCR1A8MXD5 290 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 MSTNO14793 375 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 F2RL1P55085 397 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 TNK1Q13470 666 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 TCEAL1Q15170 157 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 OR7G3Q8NG95 312 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 OR56B1Q8NGI3 324 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 NDNFQ8TB73 568 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 RBPMSQ93062 196 aaKnown RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 MIB2Q96AX9 1013 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 SGCZQ96LD1 299 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 NTPCRQ9BSD7 190 aaKnown RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 OR10A5Q9H207 317 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 OR10A2Q9H208 303 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 TLE6Q9H808 572 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 LYRM2Q9NU23 88 aaPredicted RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 SLC17A6Q9P2U8 582 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 V9GY05 133 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 SHPRHQ149N8 1683 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 CT45A6P0DMU7 189 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 CT45A5P0DMU8 189 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 CT45A7P0DMV0 189 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 CT45A8P0DMV1 189 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 CT45A9P0DMV2 189 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 VEGFAP15692 232 aaPredicted RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 SELPP16109 830 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 ITGB5P18084 799 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 TRHRP34981 398 aaPredicted RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 HTR3AP46098 478 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 ZNF133P52736 654 aaPredicted RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 CLDN8P56748 225 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 TBCEQ15813 527 aaPredicted RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 CT45A2Q5DJT8 189 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 CT45A1Q5HYN5 189 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 MANEALQ5VSG8 457 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 SPATC1Q76KD6 591 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 ANKRD53Q8N9V6 530 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 CT45A3Q8NHU0 189 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 CORO2AQ92828 525 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 NKX6-2Q9C056 277 aaPredicted RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 GAREM1Q9H706 876 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 RYDENQ9NUL5 291 aaKnown RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 ANKRD36CQ5JPF3 1778 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 B4DXG7 233 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 ZNF780AO75290 641 aaPredicted RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 NSA2O95478 260 aaKnown RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 GABRA3P34903 492 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 EFNA3P52797 238 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 PCBD1P61457 104 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 MGAT3Q09327 533 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 MAP2K5Q13163 448 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 HNF4GQ14541 408 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 TECRLQ5HYJ1 363 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 EXOSC6Q5RKV6 272 aaKnown RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 TMEM244Q5VVB8 128 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 PRAMEF8Q5VWM4 474 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 PRAMEF7Q5VXH5 474 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 EEF1DP3Q658K8 133 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 LRRC56Q8IYG6 542 aaPredicted RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 DBF4BQ8NFT6 615 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 OR5M3Q8NGP4 307 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 RHOXF1Q8NHV9 184 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 HPSE2Q8WWQ2 592 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 SH3YL1Q96HL8 342 aaPredicted RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 UBXN10Q96LJ8 280 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 PUS1Q9Y606 427 aaKnown RBP eCLIP4.82□□□□□ -1.64
SMG1-211ENST00000565324 ARPC1BO15143 372 aaKnown RBP4.82□□□□□ -1.64
SMG1-211ENST00000565324 GPR39O43194 453 aa4.82□□□□□ -1.64
SMG1-211ENST00000565324 LALBAP00709 142 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms