RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 CLEC4FQ8N1N0 589 aa13.94□□□□□ -0.18
CPSF1-210ENST00000532935 ACTRT2Q8TDY3 377 aa13.94□□□□□ -0.18
CPSF1-210ENST00000532935 MARVELD3Q96A59 401 aa13.94□□□□□ -0.18
CPSF1-210ENST00000532935 SLC35G5Q96KT7 338 aa13.94□□□□□ -0.18
CPSF1-210ENST00000532935 C7orf26Q96N11 449 aa13.94□□□□□ -0.18
CPSF1-210ENST00000532935 SFXN2Q96NB2 322 aa13.94□□□□□ -0.18
CPSF1-210ENST00000532935 OR7D2Q96RA2 312 aa13.94□□□□□ -0.18
CPSF1-210ENST00000532935 PTGES2Q9H7Z7 377 aa13.94□□□□□ -0.18
CPSF1-210ENST00000532935 UBQLN4Q9NRR5 601 aa13.94□□□□□ -0.18
CPSF1-210ENST00000532935 RPH3AQ9Y2J0 694 aaPredicted RBP13.94□□□□□ -0.18
CPSF1-210ENST00000532935 KCNE3Q9Y6H6 103 aa13.94□□□□□ -0.18
CPSF1-210ENST00000532935 APCP25054 2843 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 NDUFB5O43674 189 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 IDO1P14902 403 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 CPN1P15169 458 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 HK1P19367 917 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 ATP6V1C1P21283 382 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 MATN1P21941 496 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 CHMP24386 653 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 IL12AP29459 219 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 ZFP36L2P47974 494 aaKnown RBP13.93□□□□□ -0.18
CPSF1-210ENST00000532935 LHX2P50458 406 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 DGKQP52824 942 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 B3GALT5-AS1P59052 145 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 RPS26P62854 115 aaKnown RBP13.93□□□□□ -0.18
CPSF1-210ENST00000532935 DCST2Q5T1A1 773 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 LACC1Q8IV20 430 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 OR5D16Q8NGK9 328 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 DYDC1Q8WWB3 177 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 C1GALT1C1Q96EU7 318 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 MARK4Q96L34 752 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 OR52B2Q96RD2 323 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 UCK2Q9BZX2 261 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 SERHL2Q9H4I8 314 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 HHATLQ9HCP6 504 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 USH1CQ9Y6N9 552 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 NOTCH2Q04721 2471 aa13.93□□□□□ -0.18
CPSF1-210ENST00000532935 HEATR5AQ86XA9 2040 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 LRBAP50851 2863 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 NKX2-6A6NCS4 301 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 C9JVG2 144 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 H0Y3Z8 333 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 SCDO00767 359 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 DIAPH2O60879 1101 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 TOXO94900 526 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 PGRP06401 933 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 COX6B1P14854 86 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 HPGDP15428 266 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 UQCRC2P22695 453 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 TIMP3P35625 211 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 STARP49675 285 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 SRYQ05066 204 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 RCAN2Q14206 197 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 PDCD4Q53EL6 469 aaKnown RBP13.92□□□□□ -0.18
CPSF1-210ENST00000532935 RAET1LQ5VY80 246 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 NSUN5P2Q63ZY6 315 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 GATSQ8NAP1 163 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 ZPLD1Q8TCW7 415 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 CCDC115Q96NT0 180 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 TRIB1Q96RU8 372 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 ZBTB18Q99592 522 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 TUBA1CQ9BQE3 449 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 CALHM2Q9HA72 323 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 SLCO1B3Q9NPD5 702 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 KCNJ16Q9NPI9 418 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 INTS9Q9NV88 658 aaKnown RBP13.92□□□□□ -0.18
CPSF1-210ENST00000532935 BTNL2Q9UIR0 455 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 ABCA12Q86UK0 2595 aa13.92□□□□□ -0.18
CPSF1-210ENST00000532935 NPIPA5A0A0B4J1W7 369 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 A0A1W2PQD3 144 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 CD8B2A6NJW9 211 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 DUXAA6NLW8 204 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 HSPB2A8KAH6 182 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 NPIPA7E9PJI5 369 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 UBDO15205 165 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 GMFGO60234 142 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 SNRPB2P08579 225 aaKnown RBP13.91□□□□□ -0.18
CPSF1-210ENST00000532935 NPIPA8P0DM63 369 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 ZNF708P17019 499 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 CEACAM8P31997 349 aaPredicted RBP13.91□□□□□ -0.18
CPSF1-210ENST00000532935 CLDN18P56856 261 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 TFF3Q07654 80 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 HSPB2Q16082 182 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 GSTA3Q16772 222 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 GLYR1Q49A26 553 aaPredicted RBP13.91□□□□□ -0.18
CPSF1-210ENST00000532935 EPGNQ6UW88 154 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 LIX1LQ8IVB5 337 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 MISPQ8IVT2 679 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 ZNF527Q8NB42 609 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 GLB1L3Q8NCI6 653 aaPredicted RBP13.91□□□□□ -0.18
CPSF1-210ENST00000532935 NAXEQ8NCW5 288 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 TNIP2Q8NFZ5 429 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 GOT1L1Q8NHS2 421 aaPredicted RBP13.91□□□□□ -0.18
CPSF1-210ENST00000532935 MIPOL1Q8TD10 442 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 OR52E6Q96RD3 313 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 HOXD1Q9GZZ0 328 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 RUBCNLQ9H714 662 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 TACC2O95359 2948 aa13.91□□□□□ -0.18
CPSF1-210ENST00000532935 OR2M5A3KFT3 312 aa13.9□□□□□ -0.18
CPSF1-210ENST00000532935 MBD3L4A6NDZ8 208 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms