RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 GNGT2O14610 69 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 HNRNPRO43390 633 aaKnown RBP7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 FRS3O43559 492 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 NDUFB5O43674 189 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SCO2O43819 266 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 MGRN1O60291 552 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 TIPRLO75663 272 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 DNAJB5O75953 348 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 OXSR1O95747 527 aaPredicted RBP7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 LGI1O95970 557 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 F10P00742 488 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CSTAP01040 98 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 MT-ND1P03886 318 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 IFNW1P05000 195 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 FABP3P05413 133 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 NID1P14543 1247 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ITGA2P17301 1181 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 HOXB6P17509 224 aaKnown RBP7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ENDOUP21128 410 aaKnown RBP7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 RPS4Y1P22090 263 aaKnown RBP7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 YAP1P46937 504 aaKnown RBP7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 HLCSP50747 726 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 RGS8P57771 180 aaPredicted RBP7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 EEF1A1P68104 462 aaKnown RBP7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 KCNJ10P78508 379 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 NTRK2Q16620 822 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ZNF791Q3KP31 576 aaPredicted RBP7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 MRPL2Q5T653 305 aaKnown RBP7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 LYPD8Q6UX82 237 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ISLR2Q6UXK2 745 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ZDHHC21Q8IVQ6 265 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 DND1Q8IYX4 353 aaKnown RBP7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ARMC10Q8N2F6 343 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 OR10G3Q8NGC4 313 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 GEMIN6Q8WXD5 167 aaKnown RBP7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CNOT9Q92600 299 aaKnown RBP7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 TTC9Q92623 222 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 HGDQ93099 445 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 DUS3LQ96G46 650 aaKnown RBP7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 NODALQ96S42 347 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 UTP23Q9BRU9 249 aaKnown RBP7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 DCLRE1BQ9H816 532 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 METTL7AQ9H8H3 244 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SDHAF3Q9NRP4 125 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ARMC1Q9NVT9 282 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 HPF1Q9NWY4 346 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 PLA2G3Q9NZ20 509 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 KLRF1Q9NZS2 232 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 RAXQ9Y2V3 346 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SDK2Q58EX2 2172 aa7.81□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 WDR87Q6ZQQ6 2873 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 MED19A0JLT2 244 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CDHR4A6H8M9 788 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 PRAMEF25A6NGN4 478 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 C1QTNF9BB2RNN3 333 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 H3BNX3 289 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 AP3D1O14617 1153 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 GMFGO60234 142 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 FADS1O60427 444 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ATP6V1G2O95670 118 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ANGPTL1O95841 491 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 EPPINO95925 133 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 NGFRP08138 427 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 C1QTNF9P0C862 333 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 UBTFL6P0CB48 400 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 GKN3PP0CG01 181 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 UBL4AP11441 157 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 FCGR1AP12314 374 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ANPEPP15144 967 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 FASP25445 335 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 EVI2BP34910 448 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 RYKP34925 604 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CYB561P49447 251 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SOX8P57073 446 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 HOXC5Q00444 222 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 KCNC4Q03721 635 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 FOXD4Q12950 439 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 RIPK1Q13546 671 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 FGFBP1Q14512 234 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ZNF468Q5VIY5 522 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 RNF220Q5VTB9 566 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SLC22A10Q63ZE4 541 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 APOOLQ6UXV4 268 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 DEF8Q6ZN54 512 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 RTL4Q6ZR62 310 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ZNF550Q7Z398 422 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 COMTD1Q86VU5 262 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 RANBP3LQ86VV4 465 aaPredicted RBP7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CYP4Z1Q86W10 505 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 RBM45Q8IUH3 476 aaKnown RBP7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 LACC1Q8IV20 430 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 GPALPP1Q8IXQ4 340 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CMIPQ8IY22 773 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CYP4Z2PQ8N1L4 340 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 TMCO5AQ8N6Q1 288 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 POGLUT1Q8NBL1 392 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 PAPD5Q8NDF8 572 aaKnown RBP7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 GRHL3Q8TE85 626 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 DUSP19Q8WTR2 217 aa7.8□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 OIT3Q8WWZ8 545 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms