RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 APOBEC4Q8WW27 367 aaKnown RBP10.81□□□□□ -0.68
USP35-207ENST00000530546 TRMT61AQ96FX7 289 aaKnown RBP10.81□□□□□ -0.68
USP35-207ENST00000530546 MSLNLQ96KJ4 702 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 NECTIN4Q96NY8 510 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 COQ3Q9NZJ6 369 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 ZNF780BQ9Y6R6 833 aa10.81□□□□□ -0.68
USP35-207ENST00000530546 MDC1Q14676 2089 aaKnown RBP10.81□□□□□ -0.68
USP35-207ENST00000530546 FABP12A6NFH5 140 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 P2RX6O15547 441 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 ORC5O43913 435 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 CTSVO60911 334 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 SLC43A1O75387 559 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 SEMA4FO95754 770 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 CELA2BP08218 269 aaPredicted RBP10.8□□□□□ -0.68
USP35-207ENST00000530546 UGT2B7P16662 529 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 HMGA2P52926 109 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 CLDN20P56880 219 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 SIM1P81133 766 aaPredicted RBP10.8□□□□□ -0.68
USP35-207ENST00000530546 RHAGQ02094 409 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 C1orf61Q13536 156 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 CLLU1Q5K131 121 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 EOGTQ5NDL2 527 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 Q6ZS52 159 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 MEX3DQ86XN8 651 aaKnown RBP10.8□□□□□ -0.68
USP35-207ENST00000530546 NUP43Q8NFH3 380 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 IL4I1Q96RQ9 567 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 CNPPD1Q9BV87 410 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 MCUBQ9NWR8 336 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 PTTG3PQ9NZH4 202 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 ZNF224Q9NZL3 707 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 CNOT2Q9NZN8 540 aaKnown RBP10.8□□□□□ -0.68
USP35-207ENST00000530546 STUB1Q9UNE7 303 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 CYP8B1Q9UNU6 501 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 ZNF670-ZNF695F2Z2N8 137 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 H3BN98 237 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 FRS3O43559 492 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 NR2F6P10588 404 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 HOXB1P14653 301 aaPredicted RBP10.8□□□□□ -0.68
USP35-207ENST00000530546 ELAVL4P26378 380 aaKnown RBP10.8□□□□□ -0.68
USP35-207ENST00000530546 CNR2P34972 360 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 CRISP3P54108 245 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 TGM3Q08188 693 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 ILF3Q12906 894 aaKnown RBP eCLIP10.8□□□□□ -0.68
USP35-207ENST00000530546 MLC1Q15049 377 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 MED22Q15528 200 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 GRK1Q15835 563 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.8□□□□□ -0.68
USP35-207ENST00000530546 COL28A1Q2UY09 1125 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 C6orf132Q5T0Z8 1188 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 NRROSQ86YC3 692 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 SMRP1Q8NCR6 262 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 AKAP1Q92667 903 aaKnown RBP eCLIP10.8□□□□□ -0.68
USP35-207ENST00000530546 ZNF576Q9H609 170 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 TMEM74BQ9NUR3 256 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 ACTR10Q9NZ32 417 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 KLF15Q9UIH9 416 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 CES1P1Q9UKY3 287 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 LOC105369274A0A096LPK9 316 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 LOC102723532A0A0G2JNH3 316 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 H3BUI4 141 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 SCG5P05408 212 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 TPOP07202 933 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 FHP07954 510 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 SLC35G6P0C7Q6 338 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 MPIP34949 423 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 CRISP1P54107 249 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 RPS15AP62244 130 aaKnown RBP10.8□□□□□ -0.68
USP35-207ENST00000530546 LSM11P83369 360 aaKnown RBP eCLIP10.8□□□□□ -0.68
USP35-207ENST00000530546 FUT5Q11128 374 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 LARS2Q15031 903 aaKnown RBP10.8□□□□□ -0.68
USP35-207ENST00000530546 SSX1Q16384 188 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 FIGLAQ6QHK4 219 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 PTCHD4Q6ZW05 846 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 OR4N4Q8N0Y3 316 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 GHDCQ8N2G8 530 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 ASB12Q8WXK4 309 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 ZNF764Q96H86 408 aaPredicted RBP10.8□□□□□ -0.68
USP35-207ENST00000530546 MARVELD1Q9BSK0 173 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 SYNDIG1Q9H7V2 258 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 MS4A12Q9NXJ0 267 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 TAS2R16Q9NYV7 291 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 SEC14L4Q9UDX3 406 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 PHF11Q9UIL8 331 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 KCND3Q9UK17 655 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 ING4Q9UNL4 249 aa10.8□□□□□ -0.68
USP35-207ENST00000530546 A0A1W2PRG6 482 aa10.79□□□□□ -0.68
USP35-207ENST00000530546 TSC22D2O75157 780 aa10.79□□□□□ -0.68
USP35-207ENST00000530546 RAF1P04049 648 aa10.79□□□□□ -0.68
USP35-207ENST00000530546 HOXC4P09017 264 aaPredicted RBP10.79□□□□□ -0.68
USP35-207ENST00000530546 TSPAN19P0C672 248 aa10.79□□□□□ -0.68
USP35-207ENST00000530546 ATXN8OSP0DMR3 200 aa10.79□□□□□ -0.68
USP35-207ENST00000530546 PRKAR1AP10644 381 aa10.79□□□□□ -0.68
USP35-207ENST00000530546 GABRB1P18505 474 aa10.79□□□□□ -0.68
USP35-207ENST00000530546 FRMPD2BQ6IN97 320 aa10.79□□□□□ -0.68
USP35-207ENST00000530546 C16orf62Q7Z3J2 963 aa10.79□□□□□ -0.68
USP35-207ENST00000530546 LINC00518Q8N0U6 118 aa10.79□□□□□ -0.68
USP35-207ENST00000530546 OR6T1Q8NGN1 323 aa10.79□□□□□ -0.68
USP35-207ENST00000530546 SLC22A18Q96BI1 424 aa10.79□□□□□ -0.68
USP35-207ENST00000530546 ZG16BQ96DA0 208 aa10.79□□□□□ -0.68
USP35-207ENST00000530546 OR7D2Q96RA2 312 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms