RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 SDHAF3Q9NRP4 125 aa14.21□□□□□ -0.13
RAB40C-202ENST00000509637 DDX18Q9NVP1 670 aaKnown RBP14.21□□□□□ -0.13
RAB40C-202ENST00000509637 COL6A5A8TX70 2615 aa14.21□□□□□ -0.14
RAB40C-202ENST00000509637 A0A087WUV0 522 aaPredicted RBP14.2□□□□□ -0.14
RAB40C-202ENST00000509637 A0A1W2PRB8 838 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 ALG1L2C9J202 215 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 LINC01387J3KSC0 135 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 OVOL3O00110 214 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 TNFSF11O14788 317 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 HS3ST1O14792 307 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 ADAMDEC1O15204 470 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 NDUFS7O75251 213 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 GCM2O75603 506 aaPredicted RBP14.2□□□□□ -0.14
RAB40C-202ENST00000509637 THBS1P07996 1170 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 SOD3P08294 240 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 TAC1P20366 129 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 EFNA1P20827 205 aaPredicted RBP14.2□□□□□ -0.14
RAB40C-202ENST00000509637 EDNRAP25101 427 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 RNF144AP50876 292 aaPredicted RBP14.2□□□□□ -0.14
RAB40C-202ENST00000509637 PSPHP78330 225 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 C17orf67Q0P5P2 114 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 CD226Q15762 336 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 SGCBQ16585 318 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 PLPPR5Q32ZL2 321 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 NOXRED1Q6NXP6 359 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 FIGNL1Q6PIW4 674 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 CXXC5Q7LFL8 322 aaKnown RBP14.2□□□□□ -0.14
RAB40C-202ENST00000509637 GTPBP8Q8N3Z3 284 aaPredicted RBP14.2□□□□□ -0.14
RAB40C-202ENST00000509637 ZNF611Q8N823 705 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 SLC16A11Q8NCK7 471 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 OR2T11Q8NH01 316 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 CAVIN3Q969G5 261 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 GMPPAQ96IJ6 420 aaPredicted RBP14.2□□□□□ -0.14
RAB40C-202ENST00000509637 RNF145Q96MT1 663 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 SRXN1Q9BYN0 137 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 PTGES2Q9H7Z7 377 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 Q9N2J8 555 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 MED17Q9NVC6 651 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 SENP1Q9P0U3 644 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 GRID1Q9ULK0 1009 aa14.2□□□□□ -0.14
RAB40C-202ENST00000509637 NUP214P35658 2090 aaPredicted RBP14.19□□□□□ -0.14
RAB40C-202ENST00000509637 CRLF1O75462 422 aa14.19□□□□□ -0.14
RAB40C-202ENST00000509637 FAM153BP0C7A2 387 aa14.19□□□□□ -0.14
RAB40C-202ENST00000509637 PYGBP11216 843 aa14.19□□□□□ -0.14
RAB40C-202ENST00000509637 RPS3AP61247 264 aaKnown RBP14.19□□□□□ -0.14
RAB40C-202ENST00000509637 SLC18A2Q05940 514 aa14.19□□□□□ -0.14
RAB40C-202ENST00000509637 HSPB3Q12988 150 aa14.19□□□□□ -0.14
RAB40C-202ENST00000509637 DUSP5Q16690 384 aa14.19□□□□□ -0.14
RAB40C-202ENST00000509637 FAM153CQ494X1 144 aa14.19□□□□□ -0.14
RAB40C-202ENST00000509637 CCNJQ5T5M9 372 aa14.19□□□□□ -0.14
RAB40C-202ENST00000509637 Q6ZSR9 355 aa14.19□□□□□ -0.14
RAB40C-202ENST00000509637 CCNYL1Q8N7R7 359 aa14.19□□□□□ -0.14
RAB40C-202ENST00000509637 AKAP1Q92667 903 aaKnown RBP eCLIP14.19□□□□□ -0.14
RAB40C-202ENST00000509637 TXLNGYQ9BZA5 131 aa14.19□□□□□ -0.14
RAB40C-202ENST00000509637 TBL1XR1Q9BZK7 514 aa14.19□□□□□ -0.14
RAB40C-202ENST00000509637 ACTR6Q9GZN1 396 aa14.19□□□□□ -0.14
RAB40C-202ENST00000509637 TUBB1Q9H4B7 451 aa14.19□□□□□ -0.14
RAB40C-202ENST00000509637 C12orf49Q9H741 205 aa14.19□□□□□ -0.14
RAB40C-202ENST00000509637 NTMQ9P121 344 aa14.19□□□□□ -0.14
RAB40C-202ENST00000509637 ATRQ13535 2644 aa14.18□□□□□ -0.14
RAB40C-202ENST00000509637 EXOC1LA0A1B0GW35 172 aa14.18□□□□□ -0.14
RAB40C-202ENST00000509637 URI1O94763 535 aaPredicted RBP14.18□□□□□ -0.14
RAB40C-202ENST00000509637 KCNK2O95069 426 aa14.18□□□□□ -0.14
RAB40C-202ENST00000509637 DANCRP0C864 163 aa14.18□□□□□ -0.14
RAB40C-202ENST00000509637 AGTR1P30556 359 aa14.18□□□□□ -0.14
RAB40C-202ENST00000509637 FRKP42685 505 aaPredicted RBP14.18□□□□□ -0.14
RAB40C-202ENST00000509637 ATP5J2P56134 94 aa14.18□□□□□ -0.14
RAB40C-202ENST00000509637 CLEC6AQ6EIG7 209 aa14.18□□□□□ -0.14
RAB40C-202ENST00000509637 PPP4R4Q6NUP7 873 aa14.18□□□□□ -0.14
RAB40C-202ENST00000509637 GABRG1Q8N1C3 465 aa14.18□□□□□ -0.14
RAB40C-202ENST00000509637 OR2V1Q8NHB1 315 aa14.18□□□□□ -0.14
RAB40C-202ENST00000509637 GPR151Q8TDV0 419 aa14.18□□□□□ -0.14
RAB40C-202ENST00000509637 ABHD3Q8WU67 409 aa14.18□□□□□ -0.14
RAB40C-202ENST00000509637 OSTF1Q92882 214 aa14.18□□□□□ -0.14
RAB40C-202ENST00000509637 SH3YL1Q96HL8 342 aaPredicted RBP14.18□□□□□ -0.14
RAB40C-202ENST00000509637 FCRL1Q96LA6 429 aa14.18□□□□□ -0.14
RAB40C-202ENST00000509637 MIEF1Q9NQG6 463 aa14.18□□□□□ -0.14
RAB40C-202ENST00000509637 SIRT3Q9NTG7 399 aaPredicted RBP14.18□□□□□ -0.14
RAB40C-202ENST00000509637 BAIAP2L1Q9UHR4 511 aa14.18□□□□□ -0.14
RAB40C-202ENST00000509637 ING1Q9UK53 422 aaPredicted RBP14.18□□□□□ -0.14
RAB40C-202ENST00000509637 NFU1Q9UMS0 254 aa14.18□□□□□ -0.14
RAB40C-202ENST00000509637 LAMP3Q9UQV4 416 aa14.18□□□□□ -0.14
RAB40C-202ENST00000509637 NPIPA5A0A0B4J1W7 369 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 RNF223E7ERA6 249 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 NPIPA7E9PJI5 369 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 RIPK2O43353 540 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 AKAP10O43572 662 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 PROCP04070 461 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 ABHD2P08910 425 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 LINGO3P0C6S8 592 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 NPIPA8P0DM63 369 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 PRPS2P11908 318 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 PSMB1P20618 241 aaKnown RBP14.17□□□□□ -0.14
RAB40C-202ENST00000509637 GSTM5P46439 218 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 PRIM2P49643 509 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 PRKAG1P54619 331 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 RAC1P63000 192 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 CKAP4Q07065 602 aaKnown RBP14.17□□□□□ -0.14
RAB40C-202ENST00000509637 FGFBP1Q14512 234 aa14.17□□□□□ -0.14
RAB40C-202ENST00000509637 SLC29A2Q14542 456 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms