RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 AP3D1O14617 1153 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 SEMA7AO75326 666 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 DKK1O94907 266 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 SNAP29O95721 258 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 IL33O95760 270 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 H1F0P07305 194 aaKnown RBP11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 UMODP07911 640 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 KRT20P35900 424 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 FOLR3P41439 243 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 LIMS1P48059 325 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 RNF144AP50876 292 aaPredicted RBP11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 NR0B1P51843 470 aaKnown RBP11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 HMGA2P52926 109 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 ATP12AP54707 1039 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 RAD23AP54725 363 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 MYBPC1Q00872 1141 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 MERTKQ12866 999 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 EPS8Q12929 822 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 ZNF141Q15928 474 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 RFX4Q33E94 735 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 KCTD21Q4G0X4 260 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 FAM69BQ5VUD6 431 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 DHRSXQ8N5I4 330 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 APCDD1LQ8NCL9 501 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 PIK3C3Q8NEB9 887 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 C17orf47Q8NEP4 570 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 OR10G2Q8NGC3 310 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 CYGBQ8WWM9 190 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 NR4A3Q92570 626 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 EFHD2Q96C19 240 aaPredicted RBP11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 VMP1Q96GC9 406 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 FNDC11Q9BVV2 318 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 YTHDF1Q9BYJ9 559 aaKnown RBP11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 NRSN2Q9GZP1 204 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 NMNAT1Q9HAN9 279 aaPredicted RBP11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 FOXJ2Q9P0K8 574 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 TMCC3Q9ULS5 477 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 A4GNTQ9UNA3 340 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 PPIEQ9UNP9 301 aaKnown RBP11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 MYRFQ9Y2G1 1151 aa11.64□□□□□ -0.55
LYSMD3-204ENST00000509384 SEC16AO15027 2179 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 LOC102723996A0A087X1L8 192 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 TRBV11-1A0A0K0K1C0 115 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 PROB1E7EW31 1015 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 NPIPB9F8W1W9 429 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 PCDH17O14917 1159 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 TO15178 435 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 KLF7O75840 302 aaPredicted RBP11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 CCNB2O95067 398 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 TFAP2AP05549 437 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 IL12BP29460 328 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 IFNA8P32881 189 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 CAPGP40121 348 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 DAPP51397 102 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 SLC26A5P58743 744 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 TAS2R41P59536 307 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 RNF4P78317 190 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 PSPHP78330 225 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 PLCXD2Q0VAA5 305 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 FOXD4Q12950 439 aaPredicted RBP11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 PIN1Q13526 163 aaPredicted RBP11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 MICAQ29983 383 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 ZIK1Q3SY52 487 aaPredicted RBP11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 ANKRD34AQ69YU3 496 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 PLEKHM3Q6ZWE6 761 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 RANBP3LQ86VV4 465 aaPredicted RBP11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 PRR22Q8IZ63 422 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 OFCC1Q8IZS5 231 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 ZNF441Q8N8Z8 693 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 ZNF527Q8NB42 609 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 TFAP2CQ92754 450 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 ALPK1Q96QP1 1244 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 HOXD1Q9GZZ0 328 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 TOR3AQ9H497 397 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 EVA1AQ9H8M9 152 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 CTPS2Q9NRF8 586 aa11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 TMEFF2Q9UIK5 374 aaPredicted RBP11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 ZNF223Q9UK11 482 aaPredicted RBP11.63□□□□□ -0.55
LYSMD3-204ENST00000509384 A0A1W2PRQ8 180 aa11.62□□□□□ -0.55
LYSMD3-204ENST00000509384 CDC14CA4D256 554 aa11.62□□□□□ -0.55
LYSMD3-204ENST00000509384 CPSF4LA6NMK7 179 aaKnown RBP11.62□□□□□ -0.55
LYSMD3-204ENST00000509384 ENO4A6NNW6 628 aa11.62□□□□□ -0.55
LYSMD3-204ENST00000509384 FAAHO00519 579 aa11.62□□□□□ -0.55
LYSMD3-204ENST00000509384 IGHEP01854 428 aa11.62□□□□□ -0.55
LYSMD3-204ENST00000509384 RAB40ALP0C0E4 278 aa11.62□□□□□ -0.55
LYSMD3-204ENST00000509384 HPGDP15428 266 aa11.62□□□□□ -0.55
LYSMD3-204ENST00000509384 CDH2P19022 906 aaPredicted RBP11.62□□□□□ -0.55
LYSMD3-204ENST00000509384 TCN2P20062 427 aa11.62□□□□□ -0.55
LYSMD3-204ENST00000509384 CSRP1P21291 193 aaKnown RBP11.62□□□□□ -0.55
LYSMD3-204ENST00000509384 FUT4P22083 530 aa11.62□□□□□ -0.55
LYSMD3-204ENST00000509384 MYF6P23409 242 aa11.62□□□□□ -0.55
LYSMD3-204ENST00000509384 ELAVL4P26378 380 aaKnown RBP11.62□□□□□ -0.55
LYSMD3-204ENST00000509384 LCN1P31025 176 aa11.62□□□□□ -0.55
LYSMD3-204ENST00000509384 HOXC5Q00444 222 aa11.62□□□□□ -0.55
LYSMD3-204ENST00000509384 IL1RL1Q01638 556 aa11.62□□□□□ -0.55
LYSMD3-204ENST00000509384 TARDBPQ13148 414 aaKnown RBP eCLIP11.62□□□□□ -0.55
LYSMD3-204ENST00000509384 DGCR6Q14129 220 aa11.62□□□□□ -0.55
LYSMD3-204ENST00000509384 ZSWIM7Q19AV6 140 aa11.62□□□□□ -0.55
LYSMD3-204ENST00000509384 SLC36A3Q495N2 470 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms