RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 KCNN3Q9UGI6 736 aa17.87■□□□□ 0.45
SMC4-222ENST00000490207 FAF1Q9UNN5 650 aaPredicted RBP17.87■□□□□ 0.45
SMC4-222ENST00000490207 L3MBTL1Q9Y468 752 aa17.87■□□□□ 0.45
SMC4-222ENST00000490207 NUP214P35658 2090 aaPredicted RBP17.87■□□□□ 0.45
SMC4-222ENST00000490207 MYO9AB2RTY4 2548 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 OR2M5A3KFT3 312 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 ENO4A6NNW6 628 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 HPGDP15428 266 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 OPRM1P35372 400 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 MAGOHP61326 146 aaKnown RBP17.86■□□□□ 0.45
SMC4-222ENST00000490207 HBA1P69905 142 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 BCL2A1Q16548 175 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 OR4F3Q6IEY1 312 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 PLXDC2Q6UX71 529 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 GRAMD2AQ8IUY3 354 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 UBQLNLQ8IYU4 475 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 LRRC34Q8IZ02 419 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 MEIOBQ8N635 442 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 OR5M1Q8NGP8 315 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 OR4C3Q8NH37 302 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 ADAMTS15Q8TE58 950 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 WNT2BQ93097 391 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 PIGQQ9BRB3 760 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 MEAF6Q9HAF1 191 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 TMBIM4Q9HC24 238 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 UBQLN4Q9NRR5 601 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 MED12LQ86YW9 2145 aa17.86■□□□□ 0.45
SMC4-222ENST00000490207 CSMD2Q7Z408 3487 aa17.85■□□□□ 0.45
SMC4-222ENST00000490207 EEF1E1-BLOC1S5C9J1V9 151 aa17.85■□□□□ 0.45
SMC4-222ENST00000490207 H3BML4 177 aa17.85■□□□□ 0.45
SMC4-222ENST00000490207 LINC01387J3KSC0 135 aa17.85■□□□□ 0.45
SMC4-222ENST00000490207 SCDO00767 359 aa17.85■□□□□ 0.45
SMC4-222ENST00000490207 PDZD2O15018 2839 aa17.85■□□□□ 0.45
SMC4-222ENST00000490207 EEF1E1O43324 174 aaKnown RBP17.85■□□□□ 0.45
SMC4-222ENST00000490207 HCRTR2O43614 444 aa17.85■□□□□ 0.45
SMC4-222ENST00000490207 IL18BPO95998 194 aa17.85■□□□□ 0.45
SMC4-222ENST00000490207 LBPP18428 481 aa17.85■□□□□ 0.45
SMC4-222ENST00000490207 ATP6V1C1P21283 382 aa17.85■□□□□ 0.45
SMC4-222ENST00000490207 AGFG1P52594 562 aaKnown RBP17.85■□□□□ 0.45
SMC4-222ENST00000490207 KRTAP10-9P60411 292 aa17.85■□□□□ 0.45
SMC4-222ENST00000490207 FBXL19-AS1Q494R0 122 aa17.85■□□□□ 0.45
SMC4-222ENST00000490207 GLYR1Q49A26 553 aaPredicted RBP17.85■□□□□ 0.45
SMC4-222ENST00000490207 ARSKQ6UWY0 536 aa17.85■□□□□ 0.45
SMC4-222ENST00000490207 CLECL1Q8IZS7 167 aa17.85■□□□□ 0.45
SMC4-222ENST00000490207 GOT1L1Q8NHS2 421 aaPredicted RBP17.85■□□□□ 0.45
SMC4-222ENST00000490207 RNASE6Q93091 150 aaKnown RBP17.85■□□□□ 0.45
SMC4-222ENST00000490207 TLCD1Q96CP7 247 aa17.85■□□□□ 0.45
SMC4-222ENST00000490207 VDAC3Q9Y277 283 aa17.85■□□□□ 0.45
SMC4-222ENST00000490207 CREBBPQ92793 2442 aa17.84■□□□□ 0.45
SMC4-222ENST00000490207 A0A1W2PQD3 144 aa17.84■□□□□ 0.45
SMC4-222ENST00000490207 RNASET2O00584 256 aaKnown RBP17.84■□□□□ 0.45
SMC4-222ENST00000490207 SEC14L5O43304 696 aa17.84■□□□□ 0.45
SMC4-222ENST00000490207 RCBTB2O95199 551 aa17.84■□□□□ 0.45
SMC4-222ENST00000490207 PEX19P40855 299 aa17.84■□□□□ 0.45
SMC4-222ENST00000490207 SNTB1Q13884 538 aaKnown RBP17.84■□□□□ 0.45
SMC4-222ENST00000490207 DCST2Q5T1A1 773 aa17.84■□□□□ 0.45
SMC4-222ENST00000490207 BHLHB9Q6PI77 547 aa17.84■□□□□ 0.45
SMC4-222ENST00000490207 CHMP1BQ7LBR1 199 aa17.84■□□□□ 0.45
SMC4-222ENST00000490207 P4HA3Q7Z4N8 544 aa17.84■□□□□ 0.45
SMC4-222ENST00000490207 MISPQ8IVT2 679 aa17.84■□□□□ 0.45
SMC4-222ENST00000490207 OR8J2Q8NGG1 315 aa17.84■□□□□ 0.45
SMC4-222ENST00000490207 SMPDL3BQ92485 455 aa17.84■□□□□ 0.45
SMC4-222ENST00000490207 SFXN3Q9BWM7 321 aa17.84■□□□□ 0.45
SMC4-222ENST00000490207 ACBD3Q9H3P7 528 aa17.84■□□□□ 0.45
SMC4-222ENST00000490207 NKIRAS1Q9NYS0 192 aa17.84■□□□□ 0.45
SMC4-222ENST00000490207 FOXD3Q9UJU5 478 aaPredicted RBP17.84■□□□□ 0.45
SMC4-222ENST00000490207 ZNF337Q9Y3M9 751 aa17.84■□□□□ 0.45
SMC4-222ENST00000490207 RNF103-CHMP3A0A140T963 221 aa17.83■□□□□ 0.44
SMC4-222ENST00000490207 SHISA8B8ZZ34 492 aa17.83■□□□□ 0.44
SMC4-222ENST00000490207 SYT5O00445 386 aa17.83■□□□□ 0.44
SMC4-222ENST00000490207 SDHDO14521 159 aa17.83■□□□□ 0.44
SMC4-222ENST00000490207 SNNO75324 88 aaPredicted RBP17.83■□□□□ 0.44
SMC4-222ENST00000490207 ZNF17P17021 662 aa17.83■□□□□ 0.44
SMC4-222ENST00000490207 CAPN3P20807 821 aa17.83■□□□□ 0.44
SMC4-222ENST00000490207 CLNS1AP54105 237 aaKnown RBP17.83■□□□□ 0.44
SMC4-222ENST00000490207 SLC18A1P54219 525 aa17.83■□□□□ 0.44
SMC4-222ENST00000490207 EEFSECP57772 596 aaKnown RBP17.83■□□□□ 0.44
SMC4-222ENST00000490207 FOXF2Q12947 444 aa17.83■□□□□ 0.44
SMC4-222ENST00000490207 OGFOD2Q6N063 350 aa17.83■□□□□ 0.44
SMC4-222ENST00000490207 TMEM200AQ86VY9 491 aa17.83■□□□□ 0.44
SMC4-222ENST00000490207 GCNT2Q8N0V5 402 aa17.83■□□□□ 0.44
SMC4-222ENST00000490207 OR5D16Q8NGK9 328 aa17.83■□□□□ 0.44
SMC4-222ENST00000490207 OR4A15Q8NGL6 344 aa17.83■□□□□ 0.44
SMC4-222ENST00000490207 RAB3IL1Q8TBN0 382 aa17.83■□□□□ 0.44
SMC4-222ENST00000490207 TESCQ96BS2 214 aa17.83■□□□□ 0.44
SMC4-222ENST00000490207 INTS12Q96CB8 462 aaKnown RBP17.83■□□□□ 0.44
SMC4-222ENST00000490207 SH3YL1Q96HL8 342 aaPredicted RBP17.83■□□□□ 0.44
SMC4-222ENST00000490207 SLC35G5Q96KT7 338 aa17.83■□□□□ 0.44
SMC4-222ENST00000490207 OR7D2Q96RA2 312 aa17.83■□□□□ 0.44
SMC4-222ENST00000490207 THAP1Q9NVV9 213 aa17.83■□□□□ 0.44
SMC4-222ENST00000490207 KCNE3Q9Y6H6 103 aa17.83■□□□□ 0.44
SMC4-222ENST00000490207 A0A087WZY1 265 aa17.82■□□□□ 0.44
SMC4-222ENST00000490207 NPIPA5A0A0B4J1W7 369 aa17.82■□□□□ 0.44
SMC4-222ENST00000490207 SLC22A20A6NK97 555 aa17.82■□□□□ 0.44
SMC4-222ENST00000490207 NPIPA7E9PJI5 369 aa17.82■□□□□ 0.44
SMC4-222ENST00000490207 ANKRD28O15084 1053 aa17.82■□□□□ 0.44
SMC4-222ENST00000490207 SOX30O94993 753 aa17.82■□□□□ 0.44
SMC4-222ENST00000490207 TGM6O95932 706 aa17.82■□□□□ 0.44
SMC4-222ENST00000490207 NPIPA8P0DM63 369 aa17.82■□□□□ 0.44
SMC4-222ENST00000490207 KIR2DL3P43628 341 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms