RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 DECR1Q16698 335 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 CLPPQ16740 277 aaPredicted RBP6.17□□□□□ -1.42
PDCD4-209ENST00000489049 C21orf62-AS1Q17RA5 79 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 CTU2Q2VPK5 515 aaKnown RBP6.17□□□□□ -1.42
PDCD4-209ENST00000489049 DEFB134Q4QY38 66 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 ZNF628Q5EBL2 1059 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 ZNF311Q5JNZ3 666 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 UBE2UQ5VVX9 321 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 SLX4IPQ5VYV7 408 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 C18orf63Q68DL7 685 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 XAF1Q6GPH4 301 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 RPL13AP3Q6NVV1 102 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 CASP12Q6UXS9 341 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 TUBA1AQ71U36 451 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 RRM2BQ7LG56 351 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 B3GNT8Q7Z7M8 397 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 GALNT5Q7Z7M9 940 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 GALNT10Q86SR1 603 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 CMIPQ8IY22 773 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 RNF113BQ8IZP6 322 aaKnown RBP6.17□□□□□ -1.42
PDCD4-209ENST00000489049 DNAJC22Q8N4W6 341 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 CLDN22Q8N7P3 220 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 AMER3Q8N944 861 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 SMYD1Q8NB12 490 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 AQP11Q8NBQ7 271 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 ZNF540Q8NDQ6 660 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 BPIFB6Q8NFQ5 453 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 GPR32P1Q8NGA4 272 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 OR10Q1Q8NGQ4 319 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 OR52P1PQ8NH57 321 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 OR10G6Q8NH81 332 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 GNPDA2Q8TDQ7 276 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 RAB8BQ92930 207 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 CTHRC1Q96CG8 243 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 MPP4Q96JB8 637 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 SIGLEC11Q96RL6 698 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 SH3GL3Q99963 347 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 DPYSL5Q9BPU6 564 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 LRRC61Q9BV99 259 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 CDCA4Q9BXL8 241 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 SLC38A1Q9H2H9 487 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 SIAEQ9HAT2 523 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 FANCEQ9HB96 536 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 PALMDQ9NP74 551 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 MED17Q9NVC6 651 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 FKBP14Q9NWM8 211 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 NLGN3Q9NZ94 848 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 CDC14AQ9UNH5 594 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 CA5BQ9Y2D0 317 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 PCDHGA6Q9Y5G7 932 aa6.17□□□□□ -1.42
PDCD4-209ENST00000489049 DOCK9Q9BZ29 2069 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 TRBV23OR9-2A0A075B6M9 112 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 A0A0G2JN53 185 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 AGAP5A6NIR3 686 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 GLOD5A6NK44 160 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 CLDN24A6NM45 220 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 PTGES3LE9PB15 166 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 PCDH17O14917 1159 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 PPM1DO15297 605 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 YKT6O15498 198 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 AQP9O43315 295 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 ZNF749O43361 778 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 NUDT21O43809 227 aaKnown RBP6.16□□□□□ -1.42
PDCD4-209ENST00000489049 PCDHGA12O60330 932 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 OR10H3O60404 316 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 NME6O75414 186 aaPredicted RBP6.16□□□□□ -1.42
PDCD4-209ENST00000489049 WBP4O75554 376 aaKnown RBP6.16□□□□□ -1.42
PDCD4-209ENST00000489049 CYP7B1O75881 506 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 DIRAS1O95057 198 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 ZBTB11O95625 1053 aaPredicted RBP6.16□□□□□ -1.42
PDCD4-209ENST00000489049 C1QCP02747 245 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 OPN1SWP03999 348 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 HMGN1P05114 100 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 CDK1P06493 297 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 CHRM4P08173 479 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 NELFEP18615 380 aaKnown RBP6.16□□□□□ -1.42
PDCD4-209ENST00000489049 PCMT1P22061 227 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 ELAVL4P26378 380 aaKnown RBP6.16□□□□□ -1.42
PDCD4-209ENST00000489049 MAP3K8P41279 467 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 STAT5AP42229 794 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 CXCL12P48061 93 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 PRKAG1P54619 331 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 HSD17B7P56937 341 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 C21orf59P57076 290 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 IGLV3-21P80748 117 aaPredicted RBP6.16□□□□□ -1.42
PDCD4-209ENST00000489049 PLP2Q04941 152 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 DCTN2Q13561 401 aaKnown RBP6.16□□□□□ -1.42
PDCD4-209ENST00000489049 GRM7Q14831 915 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 NR1D2Q14995 579 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 UBXN2BQ14CS0 331 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 RTP5Q14D33 572 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 NCF4Q15080 339 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 GPR19Q15760 415 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 NEDD8Q15843 81 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 SYPL1Q16563 259 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 TIMM50Q3ZCQ8 353 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 C14orf28Q4W4Y0 310 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 KLHL22Q53GT1 634 aa6.16□□□□□ -1.42
PDCD4-209ENST00000489049 FGD3Q5JSP0 725 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 144.6 ms