RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 ATG4BQ9Y4P1 393 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 SLCO1B1Q9Y6L6 691 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 SDK2Q58EX2 2172 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 HEATR5AQ86XA9 2040 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 EDDM13A0A1B0GTR0 161 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 TRABD2BA6NFA1 517 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 CPSF4LA6NMK7 179 aaKnown RBP7.16□□□□□ -1.26
BEST3-205ENST00000488961 PRMT3O60678 531 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 EIF1BO60739 113 aaKnown RBP7.16□□□□□ -1.26
BEST3-205ENST00000488961 ATG12O94817 140 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 ZNF806P0C7X5 589 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 IL1RNP18510 177 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 CD79BP40259 229 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 EIF1P41567 113 aaKnown RBP7.16□□□□□ -1.26
BEST3-205ENST00000488961 RRAS2P62070 204 aaPredicted RBP7.16□□□□□ -1.26
BEST3-205ENST00000488961 CSTF1Q05048 431 aaKnown RBP7.16□□□□□ -1.26
BEST3-205ENST00000488961 C1orf61Q13536 156 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 CST6Q15828 149 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 NNATQ16517 81 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 TIGD6Q17RP2 521 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 IFI44LQ53G44 452 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 SPIN4Q56A73 249 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 PLET1Q6UQ28 207 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 PTCHD4Q6ZW05 846 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 UBE3DQ7Z6J8 389 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 LRRTM4Q86VH4 590 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 YAF2Q8IY57 180 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 METTL27Q8N6F8 245 aaPredicted RBP7.16□□□□□ -1.26
BEST3-205ENST00000488961 OR2L2Q8NH16 312 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 TM4SF18Q96CE8 201 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 RDH12Q96NR8 316 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 GAS2L1Q99501 681 aaPredicted RBP7.16□□□□□ -1.26
BEST3-205ENST00000488961 GPA33Q99795 319 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 NLNQ9BYT8 704 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 REG4Q9BYZ8 158 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 SRRQ9GZT4 340 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 OR51I1Q9H343 314 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 EGLN3Q9H6Z9 239 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 WDR26Q9H7D7 661 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 FGF22Q9HCT0 170 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 ZCCHC3Q9NUD5 404 aaKnown RBP7.16□□□□□ -1.26
BEST3-205ENST00000488961 ACER3Q9NUN7 267 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 TVP23BQ9NYZ1 205 aa7.16□□□□□ -1.26
BEST3-205ENST00000488961 GPR55Q9Y2T6 319 aaPredicted RBP7.16□□□□□ -1.26
BEST3-205ENST00000488961 NBEAQ8NFP9 2946 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 CENPVL1A0A0U1RR11 272 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 ZC3H12DA2A288 527 aaKnown RBP7.15□□□□□ -1.26
BEST3-205ENST00000488961 PLA2G10O15496 165 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 KIAA0513O60268 411 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 GPR37L1O60883 481 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 ENTPD6O75354 484 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 RPLP0P05388 317 aaKnown RBP7.15□□□□□ -1.26
BEST3-205ENST00000488961 CELA2BP08218 269 aaPredicted RBP7.15□□□□□ -1.26
BEST3-205ENST00000488961 ACAA1P09110 424 aaPredicted RBP7.15□□□□□ -1.26
BEST3-205ENST00000488961 NR2F1P10589 423 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 SFTPCP11686 197 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 COL9A1P20849 921 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 CPN2P22792 545 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 BCL6P41182 706 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 MAGEA2P43356 314 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 ZNF81P51508 661 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 ITGA1P56199 1179 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 PSPHP78330 225 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 SIM1P81133 766 aaPredicted RBP7.15□□□□□ -1.26
BEST3-205ENST00000488961 TSTQ16762 297 aaKnown RBP7.15□□□□□ -1.26
BEST3-205ENST00000488961 SWI5Q1ZZU3 235 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 HFEQ30201 348 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 SLC35F1Q5T1Q4 408 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 PDZK1Q5T2W1 519 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 AGBL4Q5VU57 503 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 SAXO2Q658L1 398 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 VRK2Q86Y07 508 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 ZNF614Q8N883 585 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 TCEANCQ8N8B7 351 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 WDR36Q8NI36 951 aaKnown RBP7.15□□□□□ -1.26
BEST3-205ENST00000488961 CXorf58Q96LI9 332 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 ZNF285Q96NJ3 590 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 CFHR5Q9BXR6 569 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 NKX2-4Q9H2Z4 354 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 TCEAL2Q9H3H9 227 aaPredicted RBP7.15□□□□□ -1.26
BEST3-205ENST00000488961 SEMA3GQ9NS98 782 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 SEC14L3Q9UDX4 400 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 ATXN7L1Q9ULK2 861 aaPredicted RBP7.15□□□□□ -1.26
BEST3-205ENST00000488961 FKBP7Q9Y680 259 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 DSPP15924 2871 aaKnown RBP7.15□□□□□ -1.26
BEST3-205ENST00000488961 CACNA1EQ15878 2313 aa7.15□□□□□ -1.26
BEST3-205ENST00000488961 A0A1W2PPV9 198 aa7.15□□□□□ -1.27
BEST3-205ENST00000488961 SLC16A6O15403 523 aa7.15□□□□□ -1.27
BEST3-205ENST00000488961 FCMRO60667 390 aa7.15□□□□□ -1.27
BEST3-205ENST00000488961 LDB3O75112 727 aa7.15□□□□□ -1.27
BEST3-205ENST00000488961 EIF3GO75821 320 aaKnown RBP eCLIP7.15□□□□□ -1.27
BEST3-205ENST00000488961 IFNA7P01567 189 aa7.15□□□□□ -1.27
BEST3-205ENST00000488961 APOC3P02656 99 aa7.15□□□□□ -1.27
BEST3-205ENST00000488961 KLK3P07288 261 aaPredicted RBP7.15□□□□□ -1.27
BEST3-205ENST00000488961 HBQ1P09105 142 aa7.15□□□□□ -1.27
BEST3-205ENST00000488961 CSF3P09919 207 aa7.15□□□□□ -1.27
BEST3-205ENST00000488961 SOX6P35712 828 aa7.15□□□□□ -1.27
BEST3-205ENST00000488961 MC3RP41968 323 aa7.15□□□□□ -1.27
BEST3-205ENST00000488961 RAB13P51153 203 aa7.15□□□□□ -1.27
BEST3-205ENST00000488961 RPL6Q02878 288 aaKnown RBP7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms