RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 PTTG3PQ9NZH4 202 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 IKZF2Q9UKS7 526 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 TBC1D24Q9ULP9 559 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 CHD1O14646 1710 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 UGGT2Q9NYU1 1516 aa3.63□□□□□ -1.83
VPS13D-207ENST00000476169 ABCC10Q5T3U5 1492 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 NPIPA7E9PJI5 369 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 G3V4G9 280 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 SURF4O15260 269 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 CIDEAO60543 219 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 SRPX2O60687 465 aaPredicted RBP3.62□□□□□ -1.83
VPS13D-207ENST00000476169 B3GAT3O94766 335 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 DIRAS1O95057 198 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 NGFP01138 241 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 OPN1LWP04000 364 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 FRMD6-AS1P0C7T7 363 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 NPIPA8P0DM63 369 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 T-ENOLP0DO92 83 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 ATP1B2P14415 290 aaPredicted RBP3.62□□□□□ -1.83
VPS13D-207ENST00000476169 PLA2G2AP14555 144 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 PRKACAP17612 351 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 CPN2P22792 545 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 SOX3P41225 446 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 BDKRB1P46663 353 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 CSNK1EP49674 416 aaKnown RBP3.62□□□□□ -1.83
VPS13D-207ENST00000476169 STARP49675 285 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 XGP55808 180 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 OGDHQ02218 1023 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 MICBQ29980 383 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 ACCSLQ4AC99 568 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 SBK1Q52WX2 424 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 FAM76BQ5HYJ3 339 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 PRSS57Q6UWY2 283 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 GCNT7Q6ZNI0 430 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 H2BFWTQ7Z2G1 175 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 TBC1D10CQ8IV04 446 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 SLC35F2Q8IXU6 374 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 CHDHQ8NE62 594 aaPredicted RBP3.62□□□□□ -1.83
VPS13D-207ENST00000476169 OR5L2Q8NGL0 311 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 OR13A1Q8NGR1 328 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 OR6F1Q8NGZ6 308 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 SCARB1Q8WTV0 552 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 PIBF1Q8WXW3 757 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 SLC38A4Q969I6 547 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 VOPP1Q96AW1 172 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 SGK3Q96BR1 496 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 SLC6A7Q99884 636 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 SLC30A2Q9BRI3 323 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 TUBGCP2Q9BSJ2 902 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 FUCA2Q9BTY2 467 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 FNDC4Q9H6D8 234 aaPredicted RBP3.62□□□□□ -1.83
VPS13D-207ENST00000476169 IL36GQ9NZH8 169 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.62□□□□□ -1.83
VPS13D-207ENST00000476169 NPIPA1Q9UND3 350 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 EIF3LQ9Y262 564 aaKnown RBP3.62□□□□□ -1.83
VPS13D-207ENST00000476169 PCDHGB1Q9Y5G3 927 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 ARID2Q68CP9 1835 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 SHROOM2Q13796 1616 aa3.62□□□□□ -1.83
VPS13D-207ENST00000476169 EEA1Q15075 1411 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 PRDM2Q13029 1718 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 ABCC2Q92887 1545 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 IGHV4-61A0A0C4DH41 118 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 LOC100653049A0A140TA62 436 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 A0A1W2PNV4 684 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 TUBAL3A6NHL2 446 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 RNF113AO15541 343 aaKnown RBP3.61□□□□□ -1.83
VPS13D-207ENST00000476169 PPIHO43447 177 aaKnown RBP3.61□□□□□ -1.83
VPS13D-207ENST00000476169 CHMP2AO43633 222 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 EFNA2O43921 213 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 PRKNO60260 465 aaPredicted RBP3.61□□□□□ -1.83
VPS13D-207ENST00000476169 KRT34O76011 436 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 CLDN9O95484 217 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 STAMBPO95630 424 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 F10P00742 488 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 CA1P00915 261 aaPredicted RBP3.61□□□□□ -1.83
VPS13D-207ENST00000476169 CST1P01037 141 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 IGHV4-59P01825 116 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 MBP02144 154 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 EDN1P05305 212 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 GPIP06744 558 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 EIF2S2P20042 333 aaKnown RBP3.61□□□□□ -1.83
VPS13D-207ENST00000476169 PGCP20142 388 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 PTNP21246 168 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 ANXA13P27216 316 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 CD1CP29017 333 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 GPR183P32249 361 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 UGT1A5P35504 534 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 GYG1P46976 350 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 P2RY1P47900 373 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 NOVA1P51513 510 aaKnown RBP3.61□□□□□ -1.83
VPS13D-207ENST00000476169 EFNB2P52799 333 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 CRYBB1P53674 252 aaPredicted RBP3.61□□□□□ -1.83
VPS13D-207ENST00000476169 NANOS2P60321 138 aaKnown RBP3.61□□□□□ -1.83
VPS13D-207ENST00000476169 PHEXP78562 749 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 OC90Q02509 493 aaPredicted RBP3.61□□□□□ -1.83
VPS13D-207ENST00000476169 P2RY6Q15077 328 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 SGSM1Q2NKQ1 1148 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 TP53I3Q53FA7 332 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 UNC50Q53HI1 259 aa3.61□□□□□ -1.83
VPS13D-207ENST00000476169 SFT2D3Q587I9 215 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms