RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 EFHD2Q96C19 240 aaPredicted RBP5.53□□□□□ -1.52
SDC4P-201ENST00000453285 HSPBAP1Q96EW2 488 aa5.53□□□□□ -1.52
SDC4P-201ENST00000453285 VMP1Q96GC9 406 aa5.53□□□□□ -1.52
SDC4P-201ENST00000453285 ZNF570Q96NI8 536 aa5.53□□□□□ -1.52
SDC4P-201ENST00000453285 LPAR4Q99677 370 aa5.53□□□□□ -1.52
SDC4P-201ENST00000453285 PSD2Q9BQI7 771 aa5.53□□□□□ -1.52
SDC4P-201ENST00000453285 G6PC3Q9BUM1 346 aa5.53□□□□□ -1.52
SDC4P-201ENST00000453285 REEP1Q9H902 201 aa5.53□□□□□ -1.52
SDC4P-201ENST00000453285 LIN28AQ9H9Z2 209 aaKnown RBP5.53□□□□□ -1.52
SDC4P-201ENST00000453285 NMNAT1Q9HAN9 279 aaPredicted RBP5.53□□□□□ -1.52
SDC4P-201ENST00000453285 MAN2C1Q9NTJ4 1040 aa5.53□□□□□ -1.52
SDC4P-201ENST00000453285 DLL3Q9NYJ7 618 aa5.53□□□□□ -1.52
SDC4P-201ENST00000453285 FLRT3Q9NZU0 649 aa5.53□□□□□ -1.52
SDC4P-201ENST00000453285 RHCGQ9UBD6 479 aa5.53□□□□□ -1.52
SDC4P-201ENST00000453285 COPS7AQ9UBW8 275 aa5.53□□□□□ -1.52
SDC4P-201ENST00000453285 C19orf25Q9UFG5 118 aaPredicted RBP5.53□□□□□ -1.52
SDC4P-201ENST00000453285 TMEFF2Q9UIK5 374 aaPredicted RBP5.53□□□□□ -1.52
SDC4P-201ENST00000453285 TCFL5Q9UL49 500 aa5.53□□□□□ -1.52
SDC4P-201ENST00000453285 RAB26Q9ULW5 256 aa5.53□□□□□ -1.52
SDC4P-201ENST00000453285 FARSAQ9Y285 508 aaKnown RBP5.53□□□□□ -1.52
SDC4P-201ENST00000453285 SAMHD1Q9Y3Z3 626 aaKnown RBP5.53□□□□□ -1.52
SDC4P-201ENST00000453285 FAM32AQ9Y421 112 aaKnown RBP5.53□□□□□ -1.52
SDC4P-201ENST00000453285 OR10H1Q9Y4A9 318 aa5.53□□□□□ -1.52
SDC4P-201ENST00000453285 MED12Q93074 2177 aa5.53□□□□□ -1.52
SDC4P-201ENST00000453285 CFAP54Q96N23 3096 aa5.53□□□□□ -1.52
SDC4P-201ENST00000453285 ALPK2Q86TB3 2170 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 TRBV4-1A0A0J9YWV2 114 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 TRBV11-1A0A0K0K1C0 115 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 LOC101059948A0A1B0GTJ6 334 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 SERINC4A6NH21 518 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 CDRT15L2A8MXV6 281 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.52□□□□□ -1.53
SDC4P-201ENST00000453285 E9PQ18 207 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 RAD1O60671 282 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 ADAM11O75078 769 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 E2F6O75461 281 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 ZFAND5O76080 213 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 GADD45GO95257 159 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 LYPD3O95274 346 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 UTS2O95399 124 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 SNAP29O95721 258 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 HPRP00739 348 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 H1F0P07305 194 aaKnown RBP5.52□□□□□ -1.53
SDC4P-201ENST00000453285 CELA2AP08217 269 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 GKN3PP0CG01 181 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 PRG2P13727 222 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 TBXA2RP21731 343 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 ELAVL4P26378 380 aaKnown RBP5.52□□□□□ -1.53
SDC4P-201ENST00000453285 HTR2AP28223 471 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 ABCD3P28288 659 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 LCN1P31025 176 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 STAT5AP42229 794 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 ACAA2P42765 397 aaKnown RBP5.52□□□□□ -1.53
SDC4P-201ENST00000453285 RFX3P48380 749 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 RNF144AP50876 292 aaPredicted RBP5.52□□□□□ -1.53
SDC4P-201ENST00000453285 NOVA1P51513 510 aaKnown RBP5.52□□□□□ -1.53
SDC4P-201ENST00000453285 PNLIPRP2P54317 469 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 PSMD4P55036 377 aaKnown RBP5.52□□□□□ -1.53
SDC4P-201ENST00000453285 CDH12P55289 794 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 ADARB1P78563 741 aaKnown RBP5.52□□□□□ -1.53
SDC4P-201ENST00000453285 HOXC5Q00444 222 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 SPIBQ01892 262 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 DNASE1L3Q13609 305 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 GK3PQ14409 553 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 SSPNQ14714 243 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 SEC23BQ15437 767 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 DECR1Q16698 335 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 MICAQ29983 383 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 EXOC3L2Q2M3D2 409 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 SLC36A3Q495N2 470 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 EIPR1Q53HC9 387 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 COLEC12Q5KU26 742 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 ENTPD8Q5MY95 495 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 C6orf52Q5T4I8 152 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 HLA-DQA1Q5Y7H0 255 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 KDM4DQ6B0I6 523 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 ZNF770Q6IQ21 691 aaPredicted RBP5.52□□□□□ -1.53
SDC4P-201ENST00000453285 FAHD1Q6P587 224 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 IGF2-ASQ6U949 168 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 LYPD8Q6UX82 237 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 DEF8Q6ZN54 512 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 TMPRSS7Q7RTY8 843 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 DTX1Q86Y01 620 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 PRR22Q8IZ63 422 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 OFCC1Q8IZS5 231 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 NLGN4XQ8N0W4 816 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 SLC34A3Q8N130 599 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 ESX1Q8N693 406 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 FAM71CQ8NEG0 241 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 NLGN4YQ8NFZ3 816 aaPredicted RBP5.52□□□□□ -1.53
SDC4P-201ENST00000453285 OR11G2Q8NGC1 345 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 OR52J3Q8NH60 311 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 M1APQ8TC57 530 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 GIPC3Q8TF64 312 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 RNF138Q8WVD3 245 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 OIT3Q8WWZ8 545 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 TFAP2CQ92754 450 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 OMA1Q96E52 524 aa5.52□□□□□ -1.53
SDC4P-201ENST00000453285 NAF1Q96HR8 494 aaKnown RBP5.52□□□□□ -1.53
SDC4P-201ENST00000453285 PRRC1Q96M27 445 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms