RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 LCN1P31025 176 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 CCT3P49368 545 aaKnown RBP13.79□□□□□ -0.2
CHD3-205ENST00000449744 ABCE1P61221 599 aaKnown RBP13.79□□□□□ -0.2
CHD3-205ENST00000449744 TP53BP2Q13625 1128 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 PDCD2Q16342 344 aaPredicted RBP13.79□□□□□ -0.2
CHD3-205ENST00000449744 CCNJQ5T5M9 372 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 APOOLQ6UXV4 268 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 CROCCP2Q86T23 111 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 KRTCAP2Q8N6L1 136 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 GATSQ8NAP1 163 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 OR56A1Q8NGH5 318 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 ADAMTS15Q8TE58 950 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 COQ8BQ96D53 544 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 PPP1R36Q96LQ0 422 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 ZIM3Q96PE6 472 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 STACQ99469 402 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 BTBD2Q9BX70 525 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 PINK1Q9BXM7 581 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 CLEC4MQ9H2X3 399 aaPredicted RBP13.79□□□□□ -0.2
CHD3-205ENST00000449744 PIGUQ9H490 435 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 KCNK9Q9NPC2 374 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 UBQLN4Q9NRR5 601 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 DUSP22Q9NRW4 184 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 RASSF1Q9NS23 344 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 NOP53Q9NZM5 478 aaKnown RBP13.79□□□□□ -0.2
CHD3-205ENST00000449744 PACSIN3Q9UKS6 424 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 VDAC3Q9Y277 283 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 AP4B1Q9Y6B7 739 aa13.79□□□□□ -0.2
CHD3-205ENST00000449744 CSMD1Q96PZ7 3565 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 A0A1W2PNV4 684 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 A6NNC1 897 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 TNFRSF21O75509 655 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 SNUPNO95149 360 aaKnown RBP13.78□□□□□ -0.2
CHD3-205ENST00000449744 CRHP06850 196 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 G6PDP11413 515 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 EPXP11678 715 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 EMX2Q04743 252 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 SGCBQ16585 318 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 CDC73Q6P1J9 531 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 ZAR1Q86SH2 424 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 MISPQ8IVT2 679 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 KIRREL3Q8IZU9 778 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 ZNF781Q8N8C0 355 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 CNEP1R1Q8N9A8 125 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 LINC01560Q8TB33 94 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 CDS1Q92903 461 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 MOAP1Q96BY2 351 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 DUSP26Q9BV47 211 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 ACTRT3Q9BYD9 372 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 BHLHE41Q9C0J9 482 aaPredicted RBP13.78□□□□□ -0.2
CHD3-205ENST00000449744 CXorf36Q9H7Y0 433 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 NEUROD4Q9HD90 331 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 FBXO34Q9NWN3 711 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 GIN1Q9NXP7 522 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 RAB21Q9UL25 225 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 EDARQ9UNE0 448 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 RAP2CQ9Y3L5 183 aa13.78□□□□□ -0.2
CHD3-205ENST00000449744 A0A087WZY1 265 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 H0YC42 278 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 SMNDC1O75940 238 aaKnown RBP eCLIP13.77□□□□□ -0.21
CHD3-205ENST00000449744 SOX30O94993 753 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 ZNF17P17021 662 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 DNAJA1P31689 397 aaKnown RBP13.77□□□□□ -0.21
CHD3-205ENST00000449744 SOAT1P35610 550 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 CPOXP36551 454 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 SLC1A6P48664 564 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 RPL14P50914 215 aaKnown RBP13.77□□□□□ -0.21
CHD3-205ENST00000449744 ZNF41P51814 821 aaPredicted RBP13.77□□□□□ -0.21
CHD3-205ENST00000449744 SUCLG1P53597 346 aaKnown RBP13.77□□□□□ -0.21
CHD3-205ENST00000449744 TPD52P55327 224 aaPredicted RBP13.77□□□□□ -0.21
CHD3-205ENST00000449744 CLDN8P56748 225 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 CLDN20P56880 219 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 DAZAP2Q15038 168 aaPredicted RBP13.77□□□□□ -0.21
CHD3-205ENST00000449744 SMU1Q2TAY7 513 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 PGS1Q32NB8 556 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 EXOSC6Q5RKV6 272 aaKnown RBP13.77□□□□□ -0.21
CHD3-205ENST00000449744 PPP4R4Q6NUP7 873 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 BHLHB9Q6PI77 547 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 OTOGQ6ZRI0 2925 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 PSMA8Q8TAA3 256 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 SFXN5Q8TD22 340 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 NUDT8Q8WV74 236 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 FIG4Q92562 907 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 NRGNQ92686 78 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 SH3YL1Q96HL8 342 aaPredicted RBP13.77□□□□□ -0.21
CHD3-205ENST00000449744 PAIP2Q9BPZ3 127 aaKnown RBP13.77□□□□□ -0.21
CHD3-205ENST00000449744 ZNF395Q9H8N7 513 aaPredicted RBP13.77□□□□□ -0.21
CHD3-205ENST00000449744 GALNT8Q9NY28 637 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.77□□□□□ -0.21
CHD3-205ENST00000449744 ZNF175Q9Y473 711 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 ACTL7BQ9Y614 415 aa13.77□□□□□ -0.21
CHD3-205ENST00000449744 ANKRD17O75179 2603 aaKnown RBP13.76□□□□□ -0.21
CHD3-205ENST00000449744 UQCRHLA0A096LP55 91 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 A0A1W2PQD3 144 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 A8MXE2 369 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 ESPNB1AK53 854 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 SHISA8B8ZZ34 492 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 H3BNH8 94 aa13.76□□□□□ -0.21
CHD3-205ENST00000449744 EIF1AYO14602 144 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms