RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CDX1P47902 265 aaPredicted RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 MTNR1AP48039 350 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 LHX1P48742 406 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 SRP9P49458 86 aaKnown RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 PPM1FP49593 454 aaPredicted RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 ART1P52961 327 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 CTSCP53634 463 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 PNLIPRP1P54315 467 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 ADPRHP54922 357 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 WNT3AP56704 352 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 HTRA4P83105 476 aaPredicted RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 SOX4Q06945 474 aaPredicted RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 PPP1R8Q12972 351 aaKnown RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 ZNF177Q13360 481 aaPredicted RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 CAPSQ13938 189 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 BOP1Q14137 746 aaKnown RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 PTPRCAPQ14761 206 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 IRF4Q15306 451 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 PNLIPRP3Q17RR3 467 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 RFTN2Q52LD8 501 aaPredicted RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 OXLD1Q5BKU9 147 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 SLC35D3Q5M8T2 416 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 DCST1Q5T197 706 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 GCNT6Q5T4J0 391 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 TMEM244Q5VVB8 128 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 RNF219Q5W0B1 726 aaPredicted RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 IL31Q6EBC2 164 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 ABLIM2Q6H8Q1 611 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 ZNF613Q6PF04 617 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 TSSK4Q6SA08 328 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 ATRAIDQ6UW56 229 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 DRAM2Q6UX65 266 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 ALKAL1Q6UXT8 129 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 UBE2R2Q712K3 238 aaPredicted RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 SSX6Q7RTT6 188 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 CLEC10AQ8IUN9 316 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 GID4Q8IVV7 300 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 SIAH3Q8IW03 269 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 MSRB3Q8IXL7 192 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 DEFB106AQ8N104 65 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 KCNRGQ8N5I3 272 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 C1orf127Q8N9H9 656 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 AQP11Q8NBQ7 271 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 OR8J2Q8NGG1 315 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 OR52I1Q8NGK6 324 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 OR4Q3Q8NH05 313 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 OR4L1Q8NH43 312 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 HAVCR2Q8TDQ0 301 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 DNAJB3Q8WWF6 145 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 RAB40AQ8WXH6 277 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 MAFIPQ8WZ33 124 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 THRSPQ92748 146 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 LRR1Q96L50 414 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 HBEGFQ99075 208 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 PDCD2LQ9BRP1 358 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 WRAP53Q9BUR4 548 aaKnown RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 DUSP26Q9BV47 211 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 NTMT1Q9BV86 223 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 GGACTQ9BVM4 153 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 SARGQ9BW04 601 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 COLEC11Q9BWP8 271 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 CFHR5Q9BXR6 569 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 FAM126AQ9BYI3 521 aaPredicted RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 CHIAQ9BZP6 476 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 POLR2J3Q9H1A7 115 aaKnown RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 TSPAN10Q9H1Z9 355 aaPredicted RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 ACTL8Q9H568 366 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 ZCCHC4Q9H5U6 513 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 TMEM38AQ9H6F2 299 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 WDCPQ9H6R7 721 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 EXO5Q9H790 373 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 DOCK5Q9H7D0 1870 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 IPPKQ9H8X2 491 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 SEC61A2Q9H9S3 476 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 CERS4Q9HA82 394 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 TREM1Q9NP99 234 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 SLAMF7Q9NQ25 335 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 PXMP2Q9NR77 195 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 ZSCAN32Q9NX65 697 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 EIF2B4Q9UI10 523 aaKnown RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 NEU3Q9UQ49 428 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 PRG3Q9Y2Y8 225 aaPredicted RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 PLEKHM1Q9Y4G2 1056 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 NEUROG3Q9Y4Z2 214 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 SNX10Q9Y5X0 201 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 PTGDR2Q9Y5Y4 395 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 GBF1Q92538 1859 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 A0A087X0M5 115 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 TRAV1-2A0A0B4J238 106 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 A0A1B0GV90 55 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 TMEM238LA0A1B0GVL6 79 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 A0A1B0GX30 115 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 OR2AT4A6NND4 320 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 MARCH11A6NNE9 402 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 KDM4EB2RXH2 506 aaPredicted RBP5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 ACOT7O00154 380 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 NDUFS8O00217 210 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 GPR31O00270 319 aa5.26□□□□□ -1.57
VTI1BP4-201ENST00000427516 MFNGO00587 321 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms