RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 INTS1Q8N201 2190 aaKnown RBP16.65■□□□□ 0.26
GPC1-205ENST00000427506 OR2M5A3KFT3 312 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 SCDO00767 359 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 KRT16P08779 473 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 DHRS4L1P0CG22 281 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 ATP6V1C1P21283 382 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 LCN1P31025 176 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 SOAT1P35610 550 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 CLDN8P56748 225 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 MPP2Q14168 576 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 SMU1Q2TAY7 513 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 GLYR1Q49A26 553 aaPredicted RBP16.65■□□□□ 0.26
GPC1-205ENST00000427506 TNFAIP8L3Q5GJ75 292 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 HHATQ5VTY9 493 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 CDC73Q6P1J9 531 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 ZAR1Q86SH2 424 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 RIMKLAQ8IXN7 391 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 KIRREL3Q8IZU9 778 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 CDS1Q92903 461 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 STACQ99469 402 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 ACTRT3Q9BYD9 372 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 C20orf27Q9GZN8 174 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 PIGUQ9H490 435 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 NEUROD4Q9HD90 331 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 UBQLN4Q9NRR5 601 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 DUSP22Q9NRW4 184 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 CRIM1Q9NZV1 1036 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 VDAC3Q9Y277 283 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 KIAA1549Q9HCM3 1950 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 ADGRG4Q8IZF6 3080 aa16.65■□□□□ 0.26
GPC1-205ENST00000427506 IGLV3-32A0A0A0MS00 114 aa16.64■□□□□ 0.25
GPC1-205ENST00000427506 SLC22A20A6NK97 555 aa16.64■□□□□ 0.25
GPC1-205ENST00000427506 TGM6O95932 706 aa16.64■□□□□ 0.25
GPC1-205ENST00000427506 NGFRP08138 427 aa16.64■□□□□ 0.25
GPC1-205ENST00000427506 CPA2P48052 419 aa16.64■□□□□ 0.25
GPC1-205ENST00000427506 EEF1A1P68104 462 aaKnown RBP16.64■□□□□ 0.25
GPC1-205ENST00000427506 FLYWCH1Q4VC44 716 aa16.64■□□□□ 0.25
GPC1-205ENST00000427506 EEF1A1P5Q5VTE0 462 aa16.64■□□□□ 0.25
GPC1-205ENST00000427506 LUZP2Q86TE4 346 aa16.64■□□□□ 0.25
GPC1-205ENST00000427506 OR5AK3PQ8NH89 298 aa16.64■□□□□ 0.25
GPC1-205ENST00000427506 PSMA8Q8TAA3 256 aa16.64■□□□□ 0.25
GPC1-205ENST00000427506 MOAP1Q96BY2 351 aa16.64■□□□□ 0.25
GPC1-205ENST00000427506 SH3YL1Q96HL8 342 aaPredicted RBP16.64■□□□□ 0.25
GPC1-205ENST00000427506 RBM24Q9BX46 236 aaKnown RBP16.64■□□□□ 0.25
GPC1-205ENST00000427506 GIN1Q9NXP7 522 aa16.64■□□□□ 0.25
GPC1-205ENST00000427506 ASIC5Q9NY37 505 aa16.64■□□□□ 0.25
GPC1-205ENST00000427506 STOML1Q9UBI4 398 aa16.64■□□□□ 0.25
GPC1-205ENST00000427506 TUBAL3A6NHL2 446 aa16.63■□□□□ 0.25
GPC1-205ENST00000427506 SHISA8B8ZZ34 492 aa16.63■□□□□ 0.25
GPC1-205ENST00000427506 H0YC42 278 aa16.63■□□□□ 0.25
GPC1-205ENST00000427506 HCRTR2O43614 444 aa16.63■□□□□ 0.25
GPC1-205ENST00000427506 ERLIN1O75477 346 aa16.63■□□□□ 0.25
GPC1-205ENST00000427506 ZNF41P51814 821 aaPredicted RBP16.63■□□□□ 0.25
GPC1-205ENST00000427506 SUCLG1P53597 346 aaKnown RBP16.63■□□□□ 0.25
GPC1-205ENST00000427506 TPD52P55327 224 aaPredicted RBP16.63■□□□□ 0.25
GPC1-205ENST00000427506 RPS3AP61247 264 aaKnown RBP16.63■□□□□ 0.25
GPC1-205ENST00000427506 EXOSC6Q5RKV6 272 aaKnown RBP16.63■□□□□ 0.25
GPC1-205ENST00000427506 OR2A2Q6IF42 318 aa16.63■□□□□ 0.25
GPC1-205ENST00000427506 BHLHB9Q6PI77 547 aa16.63■□□□□ 0.25
GPC1-205ENST00000427506 MISPQ8IVT2 679 aa16.63■□□□□ 0.25
GPC1-205ENST00000427506 SFXN5Q8TD22 340 aa16.63■□□□□ 0.25
GPC1-205ENST00000427506 FAM222BQ8WU58 562 aa16.63■□□□□ 0.25
GPC1-205ENST00000427506 SORT1Q99523 831 aa16.63■□□□□ 0.25
GPC1-205ENST00000427506 PINK1Q9BXM7 581 aa16.63■□□□□ 0.25
GPC1-205ENST00000427506 NUF2Q9BZD4 464 aa16.63■□□□□ 0.25
GPC1-205ENST00000427506 DPY30Q9C005 99 aa16.63■□□□□ 0.25
GPC1-205ENST00000427506 PIGMQ9H3S5 423 aa16.63■□□□□ 0.25
GPC1-205ENST00000427506 DNAJB12Q9NXW2 375 aaKnown RBP16.63■□□□□ 0.25
GPC1-205ENST00000427506 JKAMPQ9P055 326 aa16.63■□□□□ 0.25
GPC1-205ENST00000427506 PCDHGB4Q9UN71 923 aa16.63■□□□□ 0.25
GPC1-205ENST00000427506 AP4B1Q9Y6B7 739 aa16.63■□□□□ 0.25
GPC1-205ENST00000427506 DCHS2Q6V1P9 2916 aa16.63■□□□□ 0.25
GPC1-205ENST00000427506 MED12Q93074 2177 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 PDZD2O15018 2839 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 A0A087WZY1 265 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 SOX30O94993 753 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 CLDN20P56880 219 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 C21orf58P58505 322 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 HBA1P69905 142 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 BST1Q10588 318 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 SGCBQ16585 318 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 DCST2Q5T1A1 773 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 FBXW10Q5XX13 1052 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 OR4F3Q6IEY1 312 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 PPP4R4Q6NUP7 873 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 CAMKMTQ7Z624 323 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 CNEP1R1Q8N9A8 125 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 ZNF527Q8NB42 609 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 MGARPQ8TDB4 240 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 GPATCH1Q9BRR8 931 aaKnown RBP16.62■□□□□ 0.25
GPC1-205ENST00000427506 POLDIP3Q9BY77 421 aaKnown RBP16.62■□□□□ 0.25
GPC1-205ENST00000427506 PNPOQ9NVS9 261 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 GPATCH2Q9NW75 528 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 PACSIN3Q9UKS6 424 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 CSMD1Q96PZ7 3565 aa16.62■□□□□ 0.25
GPC1-205ENST00000427506 A0A1W2PNV4 684 aa16.61■□□□□ 0.25
GPC1-205ENST00000427506 A0A1W2PQD3 144 aa16.61■□□□□ 0.25
GPC1-205ENST00000427506 TNFRSF21O75509 655 aa16.61■□□□□ 0.25
GPC1-205ENST00000427506 CTAG2O75638 210 aa16.61■□□□□ 0.25
GPC1-205ENST00000427506 SMNDC1O75940 238 aaKnown RBP eCLIP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms