RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 EPPINO95925 133 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 CPEP16870 476 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 GIFP27352 417 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 BUD31P41223 144 aaPredicted RBP13.19□□□□□ -0.3
ATG3-202ENST00000402314 OR10A3P58181 314 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 REEP5Q00765 189 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 KRT33BQ14525 404 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 LGALSLQ3ZCW2 172 aaPredicted RBP13.19□□□□□ -0.3
ATG3-202ENST00000402314 C2orf27AQ580R0 203 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 FAM46CQ5VWP2 391 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 PGBD2Q6P3X8 592 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 PODNL1Q6PEZ8 512 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 SYT9Q86SS6 491 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 NR2C2APQ86WQ0 139 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 OR6T1Q8NGN1 323 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 SP7Q8TDD2 431 aaPredicted RBP13.19□□□□□ -0.3
ATG3-202ENST00000402314 FBXW5Q969U6 566 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 THAP7Q9BT49 309 aaPredicted RBP13.19□□□□□ -0.3
ATG3-202ENST00000402314 CLEC4MQ9H2X3 399 aaPredicted RBP13.19□□□□□ -0.3
ATG3-202ENST00000402314 MCCC2Q9HCC0 563 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 KLHL1Q9NR64 748 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 CNIH4Q9P003 139 aa13.19□□□□□ -0.3
ATG3-202ENST00000402314 PROM1O43490 865 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 SSNA1O43805 119 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 HCN1O60741 890 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 KCNJ5P48544 419 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 GRM7Q14831 915 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 NTRK2Q16620 822 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 OR4C11Q6IEV9 310 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 ADAMTSL4Q6UY14 1074 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 KIF18BQ86Y91 864 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 KLBQ86Z14 1044 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 LIX1LQ8IVB5 337 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 IZUMO1Q8IYV9 350 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 BBS10Q8TAM1 723 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 ARSGQ96EG1 525 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 LINC00052Q96N35 136 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 AMDHD1Q96NU7 426 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 RPP25Q9BUL9 199 aaKnown RBP13.18□□□□□ -0.3
ATG3-202ENST00000402314 C6orf106Q9H6K1 298 aaPredicted RBP13.18□□□□□ -0.3
ATG3-202ENST00000402314 WDR26Q9H7D7 661 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 A4GALTQ9NPC4 353 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 NLGN3Q9NZ94 848 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 ZC3H12DA2A288 527 aaKnown RBP13.18□□□□□ -0.3
ATG3-202ENST00000402314 FAM183AA6NL82 134 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 CHRM4P08173 479 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 NAGAP17050 411 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 CTRB1P17538 263 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 MMP11P24347 488 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 ARHGDIBP52566 201 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 COX10Q12887 443 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 SF3A2Q15428 464 aaKnown RBP13.18□□□□□ -0.3
ATG3-202ENST00000402314 CTRB2Q6GPI1 263 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 TMEM107Q6UX40 140 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 GPR135Q8IZ08 494 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 GCDHQ92947 438 aaPredicted RBP13.18□□□□□ -0.3
ATG3-202ENST00000402314 SLC35G5Q96KT7 338 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 CAMK1GQ96NX5 476 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 BBS4Q96RK4 519 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 KXD1Q9BQD3 176 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 RNF32Q9H0A6 362 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 WASH6PQ9NQA3 447 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 A4GNTQ9UNA3 340 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 CA5BQ9Y2D0 317 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 NTNG1Q9Y2I2 539 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 COL4A3Q01955 1670 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 CACNA1CQ13936 2221 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 A0A1W2PR48 441 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 LRIT2A6NDA9 550 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 SLC31A1O15431 190 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 HYAL3O43820 417 aaPredicted RBP13.18□□□□□ -0.3
ATG3-202ENST00000402314 HMGN2P05204 90 aaKnown RBP13.18□□□□□ -0.3
ATG3-202ENST00000402314 ERGP11308 486 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 STOMP27105 288 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 CERS1P27544 350 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 ILKQ13418 452 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 CST6Q15828 149 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 ARSKQ6UWY0 536 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 VITQ6UXI7 678 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 ZER1Q7Z7L7 766 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 TOR1AIP2Q8NFQ8 470 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 HEXA-AS1Q9H8Q6 139 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 SLCO1C1Q9NYB5 712 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 PTGFRNQ9P2B2 879 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 STON1Q9Y6Q2 735 aa13.18□□□□□ -0.3
ATG3-202ENST00000402314 TEX13CA0A0J9YWL9 993 aa13.17□□□□□ -0.3
ATG3-202ENST00000402314 GABRPO00591 440 aa13.17□□□□□ -0.3
ATG3-202ENST00000402314 EIF4EP06730 217 aaKnown RBP13.17□□□□□ -0.3
ATG3-202ENST00000402314 PIPP12273 146 aaPredicted RBP13.17□□□□□ -0.3
ATG3-202ENST00000402314 GIPRP48546 466 aa13.17□□□□□ -0.3
ATG3-202ENST00000402314 SNRPGP62308 76 aaKnown RBP13.17□□□□□ -0.3
ATG3-202ENST00000402314 FUT5Q11128 374 aa13.17□□□□□ -0.3
ATG3-202ENST00000402314 PDGFRLQ15198 375 aa13.17□□□□□ -0.3
ATG3-202ENST00000402314 MEDAGQ5VYS4 303 aa13.17□□□□□ -0.3
ATG3-202ENST00000402314 KIAA1211LQ6NV74 962 aa13.17□□□□□ -0.3
ATG3-202ENST00000402314 LUZP2Q86TE4 346 aa13.17□□□□□ -0.3
ATG3-202ENST00000402314 BBS1Q8NFJ9 593 aa13.17□□□□□ -0.3
ATG3-202ENST00000402314 TMEM163Q8TC26 289 aa13.17□□□□□ -0.3
ATG3-202ENST00000402314 CNRIP1Q96F85 164 aaPredicted RBP13.17□□□□□ -0.3
ATG3-202ENST00000402314 ZNF354BQ96LW1 612 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms