RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 OR4N5Q8IXE1 308 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 C9orf40Q8IXQ3 194 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 NLGN4XQ8N0W4 816 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 APCDD1LQ8NCL9 501 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 NLGN4YQ8NFZ3 816 aaPredicted RBP6.62□□□□□ -1.35
NUP43-201ENST00000340413 ADAMTS16Q8TE57 1224 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 GATA6Q92908 595 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 RAB8BQ92930 207 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 TCEAL3Q969E4 200 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 TPD52L3Q96J77 140 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 FNDC11Q9BVV2 318 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 GRIP2Q9C0E4 1043 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 POLR1BQ9H9Y6 1135 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 TMEM27Q9HBJ8 222 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 DNAJB12Q9NXW2 375 aaKnown RBP6.62□□□□□ -1.35
NUP43-201ENST00000340413 TMEFF2Q9UIK5 374 aaPredicted RBP6.62□□□□□ -1.35
NUP43-201ENST00000340413 XIRP2A4UGR9 3374 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 RALGAPA1Q6GYQ0 2036 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 IRGMA1A4Y4 181 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 SOCS6O14544 535 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 KLF4O43474 513 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 FADS1O60427 444 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 KLF7O75840 302 aaPredicted RBP6.62□□□□□ -1.35
NUP43-201ENST00000340413 STK17BO94768 372 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 LYPD3O95274 346 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 ZIC2O95409 532 aaPredicted RBP6.62□□□□□ -1.35
NUP43-201ENST00000340413 JMJD7P0C870 316 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 COX6A1P12074 109 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 GSSP48637 474 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 SPIBQ01892 262 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 PRKCDQ05655 676 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 DUSP7Q16829 419 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 RNLSQ5VYX0 342 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 OPN5Q6U736 354 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 B3GNT8Q7Z7M8 397 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 RCBTB1Q8NDN9 531 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 OR10G2Q8NGC3 310 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 HDAC2Q92769 488 aaKnown RBP6.62□□□□□ -1.35
NUP43-201ENST00000340413 HRASLS5Q96KN8 279 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 ULBP3Q9BZM4 244 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 RNF32Q9H0A6 362 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 RACGAP1Q9H0H5 632 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 PAPOLBQ9NRJ5 636 aaKnown RBP6.62□□□□□ -1.35
NUP43-201ENST00000340413 NDUFA13Q9P0J0 144 aa6.62□□□□□ -1.35
NUP43-201ENST00000340413 MUC6Q6W4X9 2439 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 SH3D21A4FU49 640 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 FAM86C2PA6NEL3 165 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 E2F6O75461 281 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 TIAF1O95411 115 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 IL7RP16871 459 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 IGFBP5P24593 272 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 CLK1P49759 484 aaKnown RBP6.61□□□□□ -1.35
NUP43-201ENST00000340413 UGT2B15P54855 530 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 RGS8P57771 180 aaPredicted RBP6.61□□□□□ -1.35
NUP43-201ENST00000340413 RPS15P62841 145 aaKnown RBP6.61□□□□□ -1.35
NUP43-201ENST00000340413 NTRK2Q16620 822 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 SYT16Q17RD7 645 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 ARMC4Q5T2S8 1044 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 ZNF691Q5VV52 312 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 PAPD4Q6PIY7 484 aaKnown RBP6.61□□□□□ -1.35
NUP43-201ENST00000340413 RASSF6Q6ZTQ3 369 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 VTCN1Q7Z7D3 282 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 CLEC4FQ8N1N0 589 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 OR2I1PQ8NGU4 316 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 ST8SIA1Q92185 356 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 ALPK1Q96QP1 1244 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 PIF1Q9H611 641 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 PNO1Q9NRX1 252 aaKnown RBP6.61□□□□□ -1.35
NUP43-201ENST00000340413 CTSFQ9UBX1 484 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 BLOC1S6Q9UL45 172 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 NDRG4Q9ULP0 352 aaKnown RBP6.61□□□□□ -1.35
NUP43-201ENST00000340413 FARSAQ9Y285 508 aaKnown RBP6.61□□□□□ -1.35
NUP43-201ENST00000340413 SLC6A5Q9Y345 797 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 KCNE3Q9Y6H6 103 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 A0A0B4J2E0 115 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 A0A1B0GX12 115 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 A0A1W2PS29 197 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 PRAMEF25A6NGN4 478 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 SCDO00767 359 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 EI24O14681 340 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 IMPA2O14732 288 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 BCAS1O75363 584 aaPredicted RBP6.61□□□□□ -1.35
NUP43-201ENST00000340413 CYP7B1O75881 506 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 UMODP07911 640 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 CCDC159P0C7I6 412 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 OSMP13725 252 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 SSTR4P31391 388 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 CHN2P52757 468 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 SESN3P58005 492 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 RPS26P62854 115 aaKnown RBP6.61□□□□□ -1.35
NUP43-201ENST00000340413 TSPAN31Q12999 210 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 EXOSC7Q15024 291 aaKnown RBP6.61□□□□□ -1.35
NUP43-201ENST00000340413 RPS26P11Q5JNZ5 115 aaPredicted RBP6.61□□□□□ -1.35
NUP43-201ENST00000340413 TMEM201Q5SNT2 666 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 HES3Q5TGS1 186 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 WBP2NLQ6ICG8 309 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 ULK3Q6PHR2 472 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 TMPRSS11FQ6ZWK6 438 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 AMIGO2Q86SJ2 522 aa6.61□□□□□ -1.35
NUP43-201ENST00000340413 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms