RNA–Protein interactions for RNA: ENST00000336023.9

TUBA1B-202, Transcript of tubulin alpha 1b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1B, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-202ENST00000336023 ACOT8O14734 319 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 OPN1SWP03999 348 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 DBIP07108 87 aaKnown RBP12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 PABPC4LP0CB38 370 aaKnown RBP12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 IL7RP16871 459 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 RPS4Y1P22090 263 aaKnown RBP12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 CASP3P42574 277 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 TRAP1Q12931 704 aaKnown RBP12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 ZNF311Q5JNZ3 666 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 CYP2R1Q6VVX0 501 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 DHFR2Q86XF0 187 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 VRK2Q86Y07 508 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 SMYD1Q8NB12 490 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 PSD4Q8NDX1 1056 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 RNF138Q8WVD3 245 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 OIT3Q8WWZ8 545 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 TM9SF4Q92544 642 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 NSMCE2Q96MF7 247 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 RSPO3Q9BXY4 272 aaPredicted RBP12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 TBL1XR1Q9BZK7 514 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 METTL7AQ9H8H3 244 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 TIMMDC1Q9NPL8 285 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 KLRF1Q9NZS2 232 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 CNIH4Q9P003 139 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 CNOT11Q9UKZ1 510 aaKnown RBP12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 IFT52Q9Y366 437 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 DTNAQ9Y4J8 743 aa12.57□□□□□ -0.4
TUBA1B-202ENST00000336023 SERINC4A6NH21 518 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 CLDN24A6NM45 220 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 SLC25A12O75746 678 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 STAMBPO95630 424 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 SERPINA1P01009 418 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 IFNA14P01570 189 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 PDGFAP04085 211 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 THBS1P07996 1170 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 NID1P14543 1247 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 NQO1P15559 274 aaKnown RBP12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 ATP6V1B2P21281 511 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 CLK3P49761 638 aaKnown RBP12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 TNFSF10P50591 281 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 LARS2Q15031 903 aaKnown RBP12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 LINC00303Q3SY05 128 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 CYBRD1Q53TN4 286 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 PRAMEF20Q5VT98 475 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 LCN8Q6JVE9 175 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 TMEM81Q6P7N7 255 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 IGFL3Q6UXB1 125 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 MARCH3Q86UD3 253 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 SPPL2CQ8IUH8 684 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 CATSPER1Q8NEC5 780 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 SLC26A7Q8TE54 656 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 WDR60Q8WVS4 1066 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 RAB3IPQ96QF0 476 aaPredicted RBP12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 ARHGAP9Q9BRR9 750 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 RTN4RQ9BZR6 473 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 GALNT9Q9HCQ5 603 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 ZNF443Q9Y2A4 671 aaPredicted RBP12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 PCDHGB7Q9Y5F8 929 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 CSAG2Q9Y5P2 127 aa12.56□□□□□ -0.4
TUBA1B-202ENST00000336023 A0A1W2PQD3 144 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 H3BNH8 94 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 K7EM74 188 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 ADAM10O14672 748 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 SCO2O43819 266 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 TPST1O60507 370 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 CIB2O75838 187 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 P04436 131 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 FAM87AP0C7U9 286 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 PRKAR1BP31321 381 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 PTGDSP41222 190 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 CD97P48960 835 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 KCNJ10P78508 379 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 KCNAB2Q13303 367 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 SNTA1Q13424 505 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 ELOAQ14241 798 aaKnown RBP12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 FLOT2Q14254 428 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 FGFBP1Q14512 234 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 CD226Q15762 336 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 DUSP7Q16829 419 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 COL28A1Q2UY09 1125 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 LIN52Q52LA3 116 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 C1orf146Q5VVC0 180 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 ZADH2Q8N4Q0 377 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 GATSQ8NAP1 163 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 MDS2Q8NDY4 140 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 OR52E4Q8NGH9 312 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 OSBPL11Q9BXB4 747 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 PROK2Q9HC23 129 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 SACM1LQ9NTJ5 587 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 DCAF13Q9NV06 445 aaKnown RBP12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 CHST2Q9Y4C5 530 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 ANKRD33BA6NCL7 494 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 C2orf72A6NCS6 295 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 CFAP73A6NFT4 308 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 TMEM229AB2RXF0 380 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 G3V3Y1 287 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 NDUFB5O43674 189 aa12.55□□□□□ -0.4
TUBA1B-202ENST00000336023 ZNF682O95780 498 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms