RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 OR6N1Q8NGY5 312 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 MED30Q96HR3 178 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 CNN2Q99439 309 aaKnown RBP7.74□□□□□ -1.17
VPS41-202ENST00000310301 SAMD10Q9BYL1 202 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.74□□□□□ -1.17
VPS41-202ENST00000310301 GLTPQ9NZD2 209 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 GPR52Q9Y2T5 361 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 A0A1W2PQ09 198 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 HCRTO43612 131 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 CACNG3O60359 315 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 HPGDSO60760 199 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 T-ENOLP0DO92 83 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 GPR4P46093 362 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 HTD2P86397 168 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 TATDN3Q17R31 274 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.73□□□□□ -1.17
VPS41-202ENST00000310301 PROX2Q3B8N5 592 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 KIAA1211LQ6NV74 962 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 ZER1Q7Z7L7 766 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 C12orf45Q8N5I9 185 aaPredicted RBP7.73□□□□□ -1.17
VPS41-202ENST00000310301 SLC5A8Q8N695 610 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 TTC9BQ8N6N2 239 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.73□□□□□ -1.17
VPS41-202ENST00000310301 HAS2Q92819 552 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 PEBP4Q96S96 227 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 GAREM1Q9H706 876 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 BRF2Q9HAW0 419 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 B4GALT6Q9UBX8 382 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 REV1Q9UBZ9 1251 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 KLF15Q9UIH9 416 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 NAP1L6A6NFF2 107 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 SHISA7A6NL88 538 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 TTLL8A6PVC2 850 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 MT-ND4P03905 459 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 IFNGR1P15260 489 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 FLYWCH1Q4VC44 716 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 TRIM46Q7Z4K8 759 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 GALNT10Q86SR1 603 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 LILRB2Q8N423 598 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 MS4A15Q8N5U1 240 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 IQCF1Q8N6M8 205 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 OR4Q3Q8NH05 313 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 PCNPQ8WW12 178 aaKnown RBP7.73□□□□□ -1.17
VPS41-202ENST00000310301 LINC01599Q8WXQ3 324 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 RRNAD1Q96FB5 475 aaKnown RBP7.73□□□□□ -1.17
VPS41-202ENST00000310301 TSGA13Q96PP4 275 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 RBP7Q96R05 134 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 LMF1Q96S06 567 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 FOXQ1Q9C009 403 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 TGIF2Q9GZN2 237 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 PLEKHA3Q9HB20 300 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 SRA1Q9HD15 236 aaKnown RBP7.73□□□□□ -1.17
VPS41-202ENST00000310301 NLE1Q9NVX2 485 aaPredicted RBP7.73□□□□□ -1.17
VPS41-202ENST00000310301 ANKRD66B4E2M5 251 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 SULT1B1O43704 296 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 PRICKLE3O43900 615 aaPredicted RBP7.73□□□□□ -1.17
VPS41-202ENST00000310301 PIP5K1CO60331 668 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 MRPS14O60783 128 aaKnown RBP7.73□□□□□ -1.17
VPS41-202ENST00000310301 UBBP0CG47 229 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 UBCP0CG48 685 aaKnown RBP7.73□□□□□ -1.17
VPS41-202ENST00000310301 NR2C1P13056 603 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 SERPINF1P36955 418 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 CAV3P56539 151 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 RPS27AP62979 156 aaKnown RBP7.73□□□□□ -1.17
VPS41-202ENST00000310301 UBA52P62987 128 aaKnown RBP7.73□□□□□ -1.17
VPS41-202ENST00000310301 MEF2AQ02078 507 aaPredicted RBP7.73□□□□□ -1.17
VPS41-202ENST00000310301 GALNT2Q10471 571 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 GK3PQ14409 553 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 FAM69AQ5T7M9 428 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 BORAQ6PGQ7 559 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 LRFN4Q6PJG9 635 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 SUSD1Q6UWL2 747 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 ZNF611Q8N823 705 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 OR5M3Q8NGP4 307 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 FBXO4Q9UKT5 387 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 POP7O75817 140 aaKnown RBP7.73□□□□□ -1.17
VPS41-202ENST00000310301 NDUFV2P19404 249 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 HSD11B2P80365 405 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 RIN1Q13671 783 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 TMEM150AQ86TG1 271 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 ZSCAN4Q8NAM6 433 aaPredicted RBP7.73□□□□□ -1.17
VPS41-202ENST00000310301 CAMKVQ8NCB2 501 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 NETO1Q8TDF5 533 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 RLN3Q8WXF3 142 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 OR5P2Q8WZ92 322 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 TFAP2CQ92754 450 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 PNPLA2Q96AD5 504 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 CSNK1G1Q9HCP0 422 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 POU2F3Q9UKI9 436 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 LRRC37AA6NMS7 1700 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 LOC285095A0A1B0GVY8 99 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 FANCGO15287 622 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 CNOT4O95628 575 aaKnown RBP7.73□□□□□ -1.17
VPS41-202ENST00000310301 DIRAS3O95661 229 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 EDN1P05305 212 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 CLCNKAP51800 687 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 PGGT1BP53609 377 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 WNT4P56705 351 aa7.73□□□□□ -1.17
VPS41-202ENST00000310301 TAGLNQ01995 201 aaKnown RBP7.73□□□□□ -1.17
VPS41-202ENST00000310301 SCGB2A2Q13296 93 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms