RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Adi1Q99JT9 179 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Gpr146Q99LE2 333 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 MthfsQ9D110 203 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 HhatlQ9D1G3 503 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 9030624G23RikQ9D308 155 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 4933425L06RikQ9D3Z8 585 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Tex47Q9D5W8 253 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Prmt1Q9JIF0 371 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Dnajc12Q9R022 198 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 PrknQ9WVS6 464 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 HaspinQ9Z0R0 754 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Bcorl1A2AQH4 1781 aa8.46□□□□□ -1.05
Upf3b-201ENSMUST00000076265 Trbv30A0A0B4J1P1 111 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Atg4a-psA0A0G2JFS9 396 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr239A0PK55 315 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ndor1A2AI05 598 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 CK137956B1AYM9 596 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Lipo4D3Z608 396 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr891E9Q843 316 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 AlpiF8VPQ6 554 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr55K7N6Q1 315 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr1564K7N6V7 318 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Vmn2r45L7N2B5 852 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Anxa3O35639 323 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Cbr2P08074 244 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Hoxc6P10629 235 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Slc2a1P17809 492 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Sstr2P30875 369 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Hsf2P38533 535 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Timp3P39876 211 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Nanos3P60324 178 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Drd2P61168 444 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 ErgP81270 486 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr90Q0VEL5 310 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm8773Q3UQ24 132 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Slc5a6Q5U4D8 634 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 HykkQ5U5V2 376 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ugt1a1Q63886 535 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gdpd5Q640M6 607 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Rad9bQ6WBX7 403 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Nipa1Q8BHK1 323 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Atg4aQ8C9S8 396 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Samd4aQ8CBY1 711 aaKnown RBP8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 SccpdhQ8R127 429 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Akr1d1Q8VCX1 325 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr1240Q8VG73 314 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr651Q8VG78 313 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr346Q8VGJ7 309 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 AclyQ91V92 1091 aaKnown RBP8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Far1Q922J9 515 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 DohhQ99LN9 302 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Nkx6-1Q99MA9 365 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Rnf2Q9CQJ4 336 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 GrapQ9CX99 217 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Snapc3Q9D2C9 407 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Mau2Q9D2X5 619 aaKnown RBP8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Col13a1Q9R1N9 751 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Rgs11Q9Z2H1 443 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Vmn1r61W4VSP5 300 aa8.46□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Atrnl1Q6A051 1378 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Rpl7a-ps3A0A140T8L1 270 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Cytl1A1E5L0 139 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Prss40A6H6T1 365 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Vmn1r167G3UW71 315 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Fcgr1P26151 404 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Hoxd9P28357 339 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Bace1P56818 501 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 VegfdP97946 358 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Rplp2P99027 115 aaKnown RBP8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Map6d1Q14BB9 191 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tmprss12Q3V0Q7 336 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 CalcrQ60755 533 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Map3k3Q61084 626 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Acvr1bQ61271 505 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Znf474Q6V5K9 347 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 NarflQ7TMW6 476 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Kirrel2Q7TSU7 700 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Prickle3Q80VL3 624 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Prickle2Q80Y24 845 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Nmnat2Q8BNJ3 307 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ubqln3Q8C5U9 658 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr1392Q8VFA6 311 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Yipf1Q91VU1 306 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 MallQ91X49 154 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 AjubaQ91XC0 547 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Prss41Q920S2 322 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Tcaf2Q921K8 919 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 RragcQ99K70 398 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Ubxn6Q99PL6 442 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Cdc40Q9DC48 579 aaKnown RBP8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Brix1Q9DCA5 353 aaKnown RBP8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm3149E9PW52 257 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr1348F6VB59 318 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Olfr66F8VQ01 311 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 9130204L05RikG3UWB8 92 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm3542K7N6U2 270 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm8362K7N6Y6 257 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Vmn1r57K7N731 310 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm8653K9J7G2 307 aa8.45□□□□□ -1.06
Upf3b-201ENSMUST00000076265 Gm20878L7N244 103 aa8.45□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms