RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Tex22Q9D9U4 189 aa21.34■■□□□ 1.01
Upf3a-201ENSMUST00000043767 Mfsd2aQ9DA75 534 aa21.34■■□□□ 1.01
Upf3a-201ENSMUST00000043767 Kcnmb3E9Q7U0 239 aa21.33■■□□□ 1.01
Upf3a-201ENSMUST00000043767 Trim15G3UY57 292 aa21.33■■□□□ 1.01
Upf3a-201ENSMUST00000043767 MbP04247 154 aa21.33■■□□□ 1.01
Upf3a-201ENSMUST00000043767 Evx2P49749 475 aa21.33■■□□□ 1.01
Upf3a-201ENSMUST00000043767 InipQ3TXT3 104 aa21.33■■□□□ 1.01
Upf3a-201ENSMUST00000043767 Cdk6Q64261 326 aa21.33■■□□□ 1.01
Upf3a-201ENSMUST00000043767 Mrps7Q80X85 242 aaKnown RBP21.33■■□□□ 1.01
Upf3a-201ENSMUST00000043767 4933430I17RikQ8BHW4 495 aa21.33■■□□□ 1.01
Upf3a-201ENSMUST00000043767 Q8CF31 99 aa21.33■■□□□ 1.01
Upf3a-201ENSMUST00000043767 Ppp1r8Q8R3G1 351 aa21.33■■□□□ 1.01
Upf3a-201ENSMUST00000043767 Use1Q9CQ56 270 aa21.33■■□□□ 1.01
Upf3a-201ENSMUST00000043767 Rps21Q9CQR2 83 aaKnown RBP21.33■■□□□ 1.01
Upf3a-201ENSMUST00000043767 Armc8Q9DBR3 673 aa21.33■■□□□ 1.01
Upf3a-201ENSMUST00000043767 Slc46a3Q9DC26 460 aa21.33■■□□□ 1.01
Upf3a-201ENSMUST00000043767 HcstQ9QUJ0 79 aa21.33■■□□□ 1.01
Upf3a-201ENSMUST00000043767 Fbxw5Q9QXW2 573 aa21.33■■□□□ 1.01
Upf3a-201ENSMUST00000043767 Plod2Q9R0B9 737 aa21.33■■□□□ 1.01
Upf3a-201ENSMUST00000043767 Itga10E9Q6R1 1167 aa21.33■■□□□ 1
Upf3a-201ENSMUST00000043767 Ighg2cF6TQW2 404 aa21.33■■□□□ 1
Upf3a-201ENSMUST00000043767 P01864 335 aa21.33■■□□□ 1
Upf3a-201ENSMUST00000043767 CtsaP16675 474 aa21.33■■□□□ 1
Upf3a-201ENSMUST00000043767 FesP16879 822 aa21.33■■□□□ 1
Upf3a-201ENSMUST00000043767 Tmem181aQ3U3W2 474 aa21.33■■□□□ 1
Upf3a-201ENSMUST00000043767 Hephl1Q3V1H3 1159 aa21.33■■□□□ 1
Upf3a-201ENSMUST00000043767 Dcdc2Q5DU00 475 aa21.33■■□□□ 1
Upf3a-201ENSMUST00000043767 Slc38a4Q8R1S9 547 aa21.33■■□□□ 1
Upf3a-201ENSMUST00000043767 Elf5Q8VDK3 253 aa21.33■■□□□ 1
Upf3a-201ENSMUST00000043767 Dap3Q9ER88 391 aaKnown RBP21.33■■□□□ 1
Upf3a-201ENSMUST00000043767 Mapk11Q9WUI1 364 aa21.33■■□□□ 1
Upf3a-201ENSMUST00000043767 Btbd2E9PUS2 523 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Clk3O35492 638 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Hsd3b1P24815 373 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Ccnb2P30276 398 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Ugt2b36Q3UEP4 530 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Slc27a5Q4LDG0 689 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 WhammQ571B6 793 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Dhrs13Q5SS80 376 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Doxl2Q6IMK7 723 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Lin28aQ8K3Y3 209 aaKnown RBP21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 TbccQ8VCN9 341 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Olfr1361Q8VFH0 317 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Asb17Q8VHP9 295 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Cbr4Q91VT4 236 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 SmoxQ99K82 555 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Psat1Q99K85 370 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Srfbp1Q9CZ91 441 aaKnown RBP21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Pbdc1Q9D0B6 198 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Trbv21A0A0A6YX06 97 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Fam136b-psA0A140T8T1 138 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 TagapB2RWW0 714 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Dscr3O35075 297 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Matn3O35701 481 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Pcsk2P21661 637 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Hoxc11P31313 304 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 AcadvlP50544 656 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Apoa1Q00623 264 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Hmbox1Q8BJA3 419 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 PgghgQ8BP56 690 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Fem1abQ8C0T1 654 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Crb3Q8QZT4 113 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Olfr881Q8VF63 314 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 ScgnQ91WD9 276 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Asb6Q91ZU1 418 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 D10Jhu81eQ9D172 266 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 SrfQ9JM73 504 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Jag2Q9QYE5 1247 aa21.32■■□□□ 1
Upf3a-201ENSMUST00000043767 Ralgapa1Q6GYP7 2035 aa21.31■■□□□ 1
Upf3a-201ENSMUST00000043767 Slc27a6E9Q9W4 619 aa21.31■■□□□ 1
Upf3a-201ENSMUST00000043767 1700017D01RikG5E851 209 aa21.31■■□□□ 1
Upf3a-201ENSMUST00000043767 Gm5724L7N264 670 aa21.31■■□□□ 1
Upf3a-201ENSMUST00000043767 Slc16a7O70451 484 aa21.31■■□□□ 1
Upf3a-201ENSMUST00000043767 Cdh2P15116 906 aa21.31■■□□□ 1
Upf3a-201ENSMUST00000043767 BgnP28653 369 aa21.31■■□□□ 1
Upf3a-201ENSMUST00000043767 Nat3P50296 290 aa21.31■■□□□ 1
Upf3a-201ENSMUST00000043767 Kcnj12P52187 427 aa21.31■■□□□ 1
Upf3a-201ENSMUST00000043767 Samd12Q0VE29 161 aa21.31■■□□□ 1
Upf3a-201ENSMUST00000043767 2410002F23RikQ3TE80 284 aa21.31■■□□□ 1
Upf3a-201ENSMUST00000043767 Scn3bQ8BHK2 215 aa21.31■■□□□ 1
Upf3a-201ENSMUST00000043767 Ces2eQ8BK48 559 aa21.31■■□□□ 1
Upf3a-201ENSMUST00000043767 Slc35c1Q8BLX4 363 aa21.31■■□□□ 1
Upf3a-201ENSMUST00000043767 Prdm5Q9CXE0 599 aa21.31■■□□□ 1
Upf3a-201ENSMUST00000043767 Tnfrsf22Q9ER62 198 aa21.31■■□□□ 1
Upf3a-201ENSMUST00000043767 Cdc20Q9JJ66 499 aa21.31■■□□□ 1
Upf3a-201ENSMUST00000043767 Nectin3Q9JLB9 549 aa21.31■■□□□ 1
Upf3a-201ENSMUST00000043767 Skp1Q9WTX5 163 aa21.31■■□□□ 1
Upf3a-201ENSMUST00000043767 Xlr5aA2BI45 236 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Tas2r122D3YU55 309 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Rdh19G5E8H9 318 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Gm2056J3QQ02 144 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Tgfb1P04202 390 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Sox2P48432 319 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Rims3Q80U57 307 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Klhl26Q8BGY4 606 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Ndrg4Q8BTG7 352 aaKnown RBP21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Serinc2Q8K0E7 450 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Prkd3Q8K1Y2 889 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Lrrc61Q8R2R5 259 aa21.3■■□□□ 1
Upf3a-201ENSMUST00000043767 Riok2Q9CQS5 547 aa21.3■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms