RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Sars2Q9JJL8 518 aa11.9□□□□□ -0.5
Rnf4-201ENSMUST00000030992 TapbpQ9R233 465 aa11.9□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Dctn6Q9WUB4 190 aa11.9□□□□□ -0.5
Rnf4-201ENSMUST00000030992 CorinQ9Z319 1113 aa11.9□□□□□ -0.5
Rnf4-201ENSMUST00000030992 Plxnd1Q3UH93 1925 aa11.9□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Cacna1eQ61290 2272 aa11.9□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Gm7535F7CXE4 302 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 MgllO35678 303 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Sp3O70494 783 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 P01635 115 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Cdk1P11440 297 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 TpoP35419 914 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Evx2P49749 475 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Sf3b6P59708 125 aaKnown RBP11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Rps15aP62245 130 aaKnown RBP11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Vat1Q62465 406 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Tas2r110Q7M712 333 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Olfr643Q8VGY1 314 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Gtpbp3Q923K4 492 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Plekhj1Q9D240 164 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Nrip3Q9JJR9 240 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Fkbp9Q9Z247 570 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Gm16432A0A0A6YXX9 775 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 A0A1Y7VIU7 259 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 2610021A01RikE9Q0Q3 834 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Vmn2r105E9Q3A5 860 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 C1dO35473 141 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 CyctP00015 105 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Slc11a1P41251 548 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Opn1swP51491 346 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Nell1Q2VWQ2 810 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Myl12bQ3THE2 172 aaKnown RBP11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 InipQ3TXT3 104 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Meig1Q61845 88 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Sqstm1Q64337 442 aaKnown RBP11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Polr2mQ6P6I6 366 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Lypd4Q8BVP6 246 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Irak4Q8R4K2 459 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Dusp15Q8R4V2 235 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Rab40bQ8VHP8 278 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Mrgpra7Q91ZC5 305 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Mrpl43Q99N89 183 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Hint3Q9CPS6 165 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Slc46a3Q9DC26 460 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Mettl15Q9DCL4 406 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Tm9sf3Q9ET30 587 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Pdzk1Q9JIL4 519 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Igkv17-127A0A0G2JDN5 117 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 BC035947B2RQY6 695 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Slc9a5B2RXE2 898 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Pdlim3O70209 316 aaKnown RBP11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 AurkcO88445 282 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Apoa2P09813 102 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 H2-Q7P14429 334 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 H2-Q9P14431 200 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 GalP47212 124 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Tbccd1Q640P7 552 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Olfr1231Q7TQZ8 313 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Atg4dQ8BGV9 474 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Ap5m1Q8BJ63 490 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Unc119bQ8C4B4 251 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Il17rdQ8JZL1 738 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Nmral1Q8K2T1 309 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Olfr170Q8VGL6 313 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Klhl22Q99JN2 634 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Prdm5Q9CXE0 599 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Exo5Q9CXP9 373 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Fzd5Q9EQD0 585 aa11.89□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Pdzd8B9EJ80 1147 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Btbd2E9PUS2 523 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 ChadlE9Q7T7 748 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Gm21319F6YNI8 144 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 EomesO54839 707 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 P03976 113 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Wnt4P22724 351 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Fads2p1Q0VAX3 487 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Spag8Q3V0Q6 470 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Wbp4Q61048 376 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Slc29a2Q61672 456 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Slc6a5Q761V0 799 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Zfand1Q8BFR6 268 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Leng9Q8BTN6 485 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Csnk1g2Q8BVP5 415 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Shisa7Q8C3Q5 558 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Cdc73Q8JZM7 531 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Cables2Q8K3M5 476 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Slc3a1Q91WV7 685 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Slc10a6Q9CXB2 373 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Lpar2Q9JL06 348 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Dmrt1Q9QZ59 374 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Ubqln2Q9QZM0 638 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Tyk2Q9R117 1184 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Ate1Q9Z2A5 516 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 CcniQ9Z2V9 377 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 AgmatA2AS89 358 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Gm21904A8HG57 180 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Zfp599E9PWP1 548 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Gm21866J3QMH4 180 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 Klrg1O88713 188 aa11.88□□□□□ -0.51
Rnf4-201ENSMUST00000030992 JtbO88824 146 aa11.88□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 26.2 ms