RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C SIZ1Q04195 904 aa5.49□□□□□ -1.53
SNF8YPL002C TMA10Q06177 86 aa5.49□□□□□ -1.53
SNF8YPL002C RXT3Q07458 294 aa5.49□□□□□ -1.53
SNF8YPL002C GNT1Q12096 491 aa5.49□□□□□ -1.53
SNF8YPL002C RPL11AP0C0W9 174 aaKnown RBP5.48□□□□□ -1.53
SNF8YPL002C ACE2P21192 770 aa5.48□□□□□ -1.53
SNF8YPL002C GTF1P53260 183 aaPredicted RBP5.48□□□□□ -1.53
SNF8YPL002C DUS1P53759 423 aaKnown RBP5.48□□□□□ -1.53
SNF8YPL002C NYV1Q12255 253 aa5.48□□□□□ -1.53
SNF8YPL002C RPL11BQ3E757 174 aaPredicted RBP5.48□□□□□ -1.53
SNF8YPL002C YIL177CP40434 1758 aa5.47□□□□□ -1.53
SNF8YPL002C YJL225CP40889 1758 aa5.47□□□□□ -1.53
SNF8YPL002C SIR4P11978 1358 aa5.47□□□□□ -1.53
SNF8YPL002C BI4P03879 638 aa5.47□□□□□ -1.53
SNF8YPL002C RPS9BP05755 195 aaKnown RBP5.47□□□□□ -1.53
SNF8YPL002C RAD27P26793 382 aa5.47□□□□□ -1.53
SNF8YPL002C DUT1P33317 147 aa5.47□□□□□ -1.53
SNF8YPL002C GCV2P49095 1034 aa5.47□□□□□ -1.53
SNF8YPL002C VPS62P53285 467 aa5.47□□□□□ -1.53
SNF8YPL002C MSC2Q03455 724 aa5.47□□□□□ -1.53
SNF8YPL002C YAP6Q03935 383 aa5.47□□□□□ -1.53
SNF8YPL002C NOP8Q08287 484 aaPredicted RBP5.47□□□□□ -1.53
SNF8YPL002C TOP1P04786 769 aa5.46□□□□□ -1.54
SNF8YPL002C OSM1P21375 501 aaKnown RBP5.46□□□□□ -1.54
SNF8YPL002C SLA2P33338 968 aa5.46□□□□□ -1.54
SNF8YPL002C RIX7Q07844 837 aaKnown RBP5.46□□□□□ -1.54
SNF8YPL002C ACM1Q08981 209 aa5.46□□□□□ -1.54
SNF8YPL002C MCM6P53091 1017 aaKnown RBP5.45□□□□□ -1.54
SNF8YPL002C YBP2P53169 641 aa5.45□□□□□ -1.54
SNF8YPL002C PBP1P53297 722 aaKnown RBP5.45□□□□□ -1.54
SNF8YPL002C CTI6Q08923 506 aa5.45□□□□□ -1.54
SNF8YPL002C HMI1Q12039 706 aa5.45□□□□□ -1.54
SNF8YPL002C TRP2P00899 507 aaKnown RBP5.44□□□□□ -1.54
SNF8YPL002C THS1P04801 734 aaKnown RBP5.44□□□□□ -1.54
SNF8YPL002C EMC1P25574 760 aa5.44□□□□□ -1.54
SNF8YPL002C HEM3P28789 327 aa5.44□□□□□ -1.54
SNF8YPL002C TRM2P33753 639 aa5.44□□□□□ -1.54
SNF8YPL002C MOT2P34909 587 aaKnown RBP5.44□□□□□ -1.54
SNF8YPL002C PNT1P38969 423 aa5.44□□□□□ -1.54
SNF8YPL002C MNN10P50108 393 aaKnown RBP5.44□□□□□ -1.54
SNF8YPL002C HFM1P51979 1187 aa5.44□□□□□ -1.54
SNF8YPL002C EEB1Q02891 456 aa5.44□□□□□ -1.54
SNF8YPL002C YLR224WQ05947 369 aa5.44□□□□□ -1.54
SNF8YPL002C TMA46Q12000 345 aaKnown RBP5.44□□□□□ -1.54
SNF8YPL002C YPL066WQ12194 479 aa5.44□□□□□ -1.54
SNF8YPL002C STE11P23561 717 aa5.43□□□□□ -1.54
SNF8YPL002C HCM1P25364 564 aa5.43□□□□□ -1.54
SNF8YPL002C LYP1P32487 611 aa5.43□□□□□ -1.54
SNF8YPL002C ORC1P54784 914 aaPredicted RBP5.43□□□□□ -1.54
SNF8YPL002C OYE2Q03558 400 aaKnown RBP5.43□□□□□ -1.54
SNF8YPL002C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
SNF8YPL002C SPP382Q06411 708 aaPredicted RBP5.43□□□□□ -1.54
SNF8YPL002C XYL2Q07993 356 aa5.43□□□□□ -1.54
SNF8YPL002C PFF1P38244 976 aa5.42□□□□□ -1.54
SNF8YPL002C GEM1P39722 662 aa5.42□□□□□ -1.54
SNF8YPL002C PUS9Q12069 462 aa5.42□□□□□ -1.54
SNF8YPL002C PNS1Q12412 539 aa5.42□□□□□ -1.54
SNF8YPL002C CDC34P14682 295 aa5.41□□□□□ -1.54
SNF8YPL002C ICL1P28240 557 aaPredicted RBP5.41□□□□□ -1.54
SNF8YPL002C SHC1P39000 512 aa5.41□□□□□ -1.54
SNF8YPL002C PHO23P50947 330 aa5.41□□□□□ -1.54
SNF8YPL002C RMD1Q03441 430 aa5.41□□□□□ -1.54
SNF8YPL002C IRC3Q06683 689 aa5.41□□□□□ -1.54
SNF8YPL002C INO1P11986 533 aa5.4□□□□□ -1.54
SNF8YPL002C SMY1P32364 656 aaKnown RBP5.4□□□□□ -1.54
SNF8YPL002C GRX4P32642 244 aa5.4□□□□□ -1.54
SNF8YPL002C YKU70P32807 602 aa5.4□□□□□ -1.54
SNF8YPL002C MND2P40577 368 aa5.4□□□□□ -1.54
SNF8YPL002C BUD27P43573 796 aaKnown RBP RIP-Chip data5.4□□□□□ -1.54not detected
SNF8YPL002C MTC3P53077 123 aa5.4□□□□□ -1.54
SNF8YPL002C SLI1P53304 468 aa5.4□□□□□ -1.54
SNF8YPL002C SUN4P53616 420 aa5.4□□□□□ -1.54
SNF8YPL002C NTO1Q12311 748 aa5.4□□□□□ -1.54
SNF8YPL002C VPS13Q07878 3144 aa5.39□□□□□ -1.55
SNF8YPL002C LPD1P09624 499 aaKnown RBP5.39□□□□□ -1.55
SNF8YPL002C PET112P33893 541 aa5.39□□□□□ -1.55
SNF8YPL002C SIP5P40210 489 aaKnown RBP5.39□□□□□ -1.55
SNF8YPL002C MSE1P48525 536 aa5.39□□□□□ -1.55
SNF8YPL002C TYW3P53177 273 aa5.39□□□□□ -1.55
SNF8YPL002C TPO1Q07824 586 aa5.39□□□□□ -1.55
SNF8YPL002C NOP12Q08208 459 aaKnown RBP5.39□□□□□ -1.55
SNF8YPL002C YLR278CQ05854 1341 aa5.39□□□□□ -1.55
SNF8YPL002C YLL066CQ99208 1374 aa5.39□□□□□ -1.55
SNF8YPL002C SER1P33330 395 aaKnown RBP5.38□□□□□ -1.55
SNF8YPL002C ADY3Q07732 790 aa5.38□□□□□ -1.55
SNF8YPL002C POM152P39685 1337 aa5.38□□□□□ -1.55
SNF8YPL002C MSM1P22438 575 aa5.37□□□□□ -1.55
SNF8YPL002C YKL151CP36059 337 aa5.37□□□□□ -1.55
SNF8YPL002C PLB1P39105 664 aa5.37□□□□□ -1.55
SNF8YPL002C ZRG8P40021 1076 aa5.37□□□□□ -1.55
SNF8YPL002C YGL176CP46945 554 aa5.37□□□□□ -1.55
SNF8YPL002C MDG1P53885 366 aa5.37□□□□□ -1.55
SNF8YPL002C ERO1Q03103 563 aa5.37□□□□□ -1.55
SNF8YPL002C RKM4Q12504 494 aa5.37□□□□□ -1.55
SNF8YPL002C SEC3P33332 1336 aaKnown RBP5.37□□□□□ -1.55
SNF8YPL002C YLL067CQ07888 1374 aa5.37□□□□□ -1.55
SNF8YPL002C FAS2P19097 1887 aaKnown RBP5.37□□□□□ -1.55
SNF8YPL002C MLP1Q02455 1875 aaKnown RBP5.37□□□□□ -1.55
SNF8YPL002C PMA1P05030 918 aaKnown RBP5.36□□□□□ -1.55
SNF8YPL002C ASF1P32447 279 aa5.36□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms