RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W RPL8AP17076 256 aaKnown RBP7.13□□□□□ -1.27
PRE3YJL001W SYN8P31377 255 aa7.13□□□□□ -1.27
PRE3YJL001W MLF3P32047 452 aa7.13□□□□□ -1.27
PRE3YJL001W PAN5P38787 379 aa7.13□□□□□ -1.27
PRE3YJL001W OPT1P40897 799 aa7.13□□□□□ -1.27
PRE3YJL001W YNL011CP53980 444 aa7.13□□□□□ -1.27
PRE3YJL001W ECM16Q04217 1267 aaKnown RBP7.13□□□□□ -1.27
PRE3YJL001W WHI4Q07655 649 aaKnown RBP7.13□□□□□ -1.27
PRE3YJL001W GCD6P32501 712 aaKnown RBP7.12□□□□□ -1.27
PRE3YJL001W SMY2P32909 740 aaKnown RBP7.12□□□□□ -1.27
PRE3YJL001W AAP1P37898 856 aaKnown RBP7.12□□□□□ -1.27
PRE3YJL001W DYS1P38791 387 aa7.12□□□□□ -1.27
PRE3YJL001W YTA6P40328 754 aa7.12□□□□□ -1.27
PRE3YJL001W SAD1P43589 448 aa7.12□□□□□ -1.27
PRE3YJL001W CDC55Q00362 526 aa7.12□□□□□ -1.27
PRE3YJL001W YDR444WQ04093 687 aa7.12□□□□□ -1.27
PRE3YJL001W NKP2Q06162 153 aa7.12□□□□□ -1.27
PRE3YJL001W YLR422WQ06409 1932 aa7.11□□□□□ -1.27
PRE3YJL001W MSD1P15179 658 aaKnown RBP7.11□□□□□ -1.27
PRE3YJL001W MSS51P32335 436 aa7.11□□□□□ -1.27
PRE3YJL001W RME1P32338 300 aaKnown RBP7.11□□□□□ -1.27
PRE3YJL001W PRS1P32895 427 aaKnown RBP7.11□□□□□ -1.27
PRE3YJL001W RPT1P33299 467 aaKnown RBP7.11□□□□□ -1.27
PRE3YJL001W TVP38P36164 337 aa7.11□□□□□ -1.27
PRE3YJL001W HMF1P40037 129 aaKnown RBP7.11□□□□□ -1.27
PRE3YJL001W TPM2P40414 161 aa7.11□□□□□ -1.27
PRE3YJL001W QDR2P40474 542 aa7.11□□□□□ -1.27
PRE3YJL001W PNG1Q02890 363 aa7.11□□□□□ -1.27
PRE3YJL001W MAG2Q06436 670 aaKnown RBP7.11□□□□□ -1.27
PRE3YJL001W YOR111WQ99210 232 aa7.11□□□□□ -1.27
PRE3YJL001W AHP1P38013 176 aaKnown RBP7.1□□□□□ -1.27
PRE3YJL001W SLX1P38324 304 aa7.1□□□□□ -1.27
PRE3YJL001W ALG2P43636 503 aa7.1□□□□□ -1.27
PRE3YJL001W YJR115WP47152 169 aa7.1□□□□□ -1.27
PRE3YJL001W SAM37P50110 327 aa7.1□□□□□ -1.27
PRE3YJL001W ASE1P50275 885 aa7.1□□□□□ -1.27
PRE3YJL001W LCB5Q06147 687 aaKnown RBP7.1□□□□□ -1.27
PRE3YJL001W ARP6Q12509 438 aa7.1□□□□□ -1.27
PRE3YJL001W PRC1P00729 532 aa7.09□□□□□ -1.27
PRE3YJL001W RPS31P05759 152 aaKnown RBP7.09□□□□□ -1.27
PRE3YJL001W RNR3P21672 869 aaKnown RBP7.09□□□□□ -1.27
PRE3YJL001W PWP2P25635 923 aaKnown RBP7.09□□□□□ -1.27
PRE3YJL001W SHM1P37292 490 aaPredicted RBP7.09□□□□□ -1.27
PRE3YJL001W SUL1P38359 859 aa7.09□□□□□ -1.27
PRE3YJL001W RAD55P38953 406 aa7.09□□□□□ -1.27
PRE3YJL001W YEL025CP39991 1188 aa7.09□□□□□ -1.27
PRE3YJL001W DAK2P43550 591 aa7.09□□□□□ -1.27
PRE3YJL001W PSP2P50109 593 aaKnown RBP7.09□□□□□ -1.27
PRE3YJL001W MMR1Q06324 491 aa7.09□□□□□ -1.27
PRE3YJL001W OXR1Q08952 273 aa7.09□□□□□ -1.27
PRE3YJL001W SES1P07284 462 aaKnown RBP7.08□□□□□ -1.28
PRE3YJL001W IMP2'P32351 346 aa7.08□□□□□ -1.28
PRE3YJL001W KAP122P32767 1081 aa7.08□□□□□ -1.28
PRE3YJL001W VPS35P34110 944 aa7.08□□□□□ -1.28
PRE3YJL001W UBP11P36026 717 aa7.08□□□□□ -1.28
PRE3YJL001W DRE2P36152 348 aa7.08□□□□□ -1.28
PRE3YJL001W FYV10P40492 516 aa7.08□□□□□ -1.28
PRE3YJL001W MDR1P53258 950 aa7.08□□□□□ -1.28
PRE3YJL001W MUK1Q02866 612 aa7.08□□□□□ -1.28
PRE3YJL001W LCD1Q04377 747 aa7.08□□□□□ -1.28
PRE3YJL001W EST2Q06163 884 aa7.08□□□□□ -1.28
PRE3YJL001W UBC1P21734 215 aaKnown RBP7.07□□□□□ -1.28
PRE3YJL001W MSN1P22148 382 aa7.07□□□□□ -1.28
PRE3YJL001W MBR1P23493 339 aa7.07□□□□□ -1.28
PRE3YJL001W DAL1P32375 460 aa7.07□□□□□ -1.28
PRE3YJL001W NTA1P40354 457 aa7.07□□□□□ -1.28
PRE3YJL001W FAF1P40546 346 aaPredicted RBP7.07□□□□□ -1.28
PRE3YJL001W MTO1P53070 669 aa7.07□□□□□ -1.28
PRE3YJL001W HUL5P53119 910 aa7.07□□□□□ -1.28
PRE3YJL001W ART5P53244 586 aaKnown RBP7.07□□□□□ -1.28
PRE3YJL001W ORC4P54791 529 aa7.07□□□□□ -1.28
PRE3YJL001W RSC4Q02206 625 aa7.07□□□□□ -1.28
PRE3YJL001W GDE1Q02979 1223 aa7.07□□□□□ -1.28
PRE3YJL001W SPO71Q03868 1245 aa7.07□□□□□ -1.28
PRE3YJL001W YLR455WQ06188 304 aa7.07□□□□□ -1.28
PRE3YJL001W JIP5Q06214 492 aaPredicted RBP7.07□□□□□ -1.28
PRE3YJL001W CIT1P00890 479 aa7.06□□□□□ -1.28
PRE3YJL001W PEP3P27801 918 aa7.06□□□□□ -1.28
PRE3YJL001W MCM2P29469 868 aa7.06□□□□□ -1.28
PRE3YJL001W ISW1P38144 1129 aa7.06□□□□□ -1.28
PRE3YJL001W APN2P38207 520 aa7.06□□□□□ -1.28
PRE3YJL001W CIC1P38779 376 aaKnown RBP7.06□□□□□ -1.28
PRE3YJL001W BSC2Q05611 235 aa7.06□□□□□ -1.28
PRE3YJL001W NOC3Q07896 663 aaPredicted RBP7.06□□□□□ -1.28
PRE3YJL001W PGA3Q12746 312 aaKnown RBP7.06□□□□□ -1.28
PRE3YJL001W VAS1P07806 1104 aaKnown RBP7.05□□□□□ -1.28
PRE3YJL001W PPZ1P26570 692 aa7.05□□□□□ -1.28
PRE3YJL001W IRS4P36115 615 aaKnown RBP7.05□□□□□ -1.28
PRE3YJL001W RFS1P38234 210 aaKnown RBP7.05□□□□□ -1.28
PRE3YJL001W BUD16P39988 312 aa7.05□□□□□ -1.28
PRE3YJL001W HUL4P40985 892 aa7.05□□□□□ -1.28
PRE3YJL001W YFL052WP43551 465 aa7.05□□□□□ -1.28
PRE3YJL001W RGD2P43556 714 aa7.05□□□□□ -1.28
PRE3YJL001W VTC4P47075 721 aa7.05□□□□□ -1.28
PRE3YJL001W GCV2P49095 1034 aa7.05□□□□□ -1.28
PRE3YJL001W FPR4Q06205 392 aaPredicted RBP7.05□□□□□ -1.28
PRE3YJL001W CRD1Q07560 283 aa7.05□□□□□ -1.28
PRE3YJL001W CCH1P50077 2039 aa7.05□□□□□ -1.28
PRE3YJL001W RAD50P12753 1312 aa7.04□□□□□ -1.28
PRE3YJL001W PGK1P00560 416 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms