RNA–Protein interactions for RNA: YHR070W

TRM5, Transcript of tRNA(m(1)G37)methyltransferase, yeastyeast

Gene TRM5, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM5YHR070W JSN1P47135 1091 aaKnown RBP RIP-Chip data11.9□□□□□ -0.5not detected
TRM5YHR070W TAD1P53065 400 aa11.9□□□□□ -0.5
TRM5YHR070W ENV11P53246 860 aa11.9□□□□□ -0.5
TRM5YHR070W OSW2Q12202 724 aa11.9□□□□□ -0.5
TRM5YHR070W PDC6P26263 563 aaKnown RBP11.89□□□□□ -0.51
TRM5YHR070W XRS2P33301 854 aa11.89□□□□□ -0.51
TRM5YHR070W PSF2P40359 213 aa11.89□□□□□ -0.51
TRM5YHR070W SDS3P40505 327 aa11.89□□□□□ -0.51
TRM5YHR070W SKP2P42843 763 aa11.89□□□□□ -0.51
TRM5YHR070W ACF4P47129 309 aa11.89□□□□□ -0.51
TRM5YHR070W COS5P47187 383 aa11.89□□□□□ -0.51
TRM5YHR070W CSR1Q06705 408 aaKnown RBP11.89□□□□□ -0.51
TRM5YHR070W GPT2P36148 743 aa11.88□□□□□ -0.51
TRM5YHR070W GUA1P38625 525 aaKnown RBP11.88□□□□□ -0.51
TRM5YHR070W MSC2Q03455 724 aa11.88□□□□□ -0.51
TRM5YHR070W YML020WQ03722 664 aa11.88□□□□□ -0.51
TRM5YHR070W ATG11Q12527 1178 aa11.88□□□□□ -0.51
TRM5YHR070W MTF2P10849 440 aa11.87□□□□□ -0.51
TRM5YHR070W DPH2P32461 534 aa11.87□□□□□ -0.51
TRM5YHR070W SMC1P32908 1225 aa11.87□□□□□ -0.51
TRM5YHR070W NIP100P33420 868 aa11.87□□□□□ -0.51
TRM5YHR070W SAD1P43589 448 aa11.87□□□□□ -0.51
TRM5YHR070W ORC5P50874 479 aa11.87□□□□□ -0.51
TRM5YHR070W CUL3P53202 744 aa11.87□□□□□ -0.51
TRM5YHR070W YDR090CQ03193 310 aa11.87□□□□□ -0.51
TRM5YHR070W UTP14Q04500 899 aaKnown RBP11.87□□□□□ -0.51
TRM5YHR070W YPR078CQ06813 372 aa11.87□□□□□ -0.51
TRM5YHR070W SUT2Q12286 268 aa11.87□□□□□ -0.51
TRM5YHR070W HIF1Q12373 385 aa11.87□□□□□ -0.51
TRM5YHR070W SEC23P15303 768 aaKnown RBP11.86□□□□□ -0.51
TRM5YHR070W TMT1P32643 299 aa11.86□□□□□ -0.51
TRM5YHR070W SMC2P38989 1170 aaKnown RBP11.86□□□□□ -0.51
TRM5YHR070W NPP2P39997 493 aa11.86□□□□□ -0.51
TRM5YHR070W YJR107WP47145 328 aa11.86□□□□□ -0.51
TRM5YHR070W HSH155P49955 971 aaKnown RBP11.86□□□□□ -0.51
TRM5YHR070W SHE10P53075 577 aa11.86□□□□□ -0.51
TRM5YHR070W DAK1P54838 584 aaKnown RBP11.86□□□□□ -0.51
TRM5YHR070W UBP3Q01477 912 aaKnown RBP RIP-Chip data11.86□□□□□ -0.51not detected
TRM5YHR070W UTP5Q04177 643 aaKnown RBP11.86□□□□□ -0.51
TRM5YHR070W SLX4Q12098 748 aa11.86□□□□□ -0.51
TRM5YHR070W YOL098CQ12496 1037 aa11.86□□□□□ -0.51
TRM5YHR070W VMA1P17255 1071 aaKnown RBP11.86□□□□□ -0.51
TRM5YHR070W SEC9P40357 651 aa11.86□□□□□ -0.51
TRM5YHR070W ECM7Q06200 448 aa11.86□□□□□ -0.51
TRM5YHR070W HFI1Q12060 488 aa11.86□□□□□ -0.51
TRM5YHR070W SNA3P14359 133 aa11.85□□□□□ -0.51
TRM5YHR070W STO1P34160 861 aaKnown RBP11.85□□□□□ -0.51
TRM5YHR070W PIN4P34217 668 aaKnown RBP RIP-Chip data11.85□□□□□ -0.51not detected
TRM5YHR070W AFG3P39925 761 aa11.85□□□□□ -0.51
TRM5YHR070W MMM1P41800 426 aa11.85□□□□□ -0.51
TRM5YHR070W JJJ3P47138 172 aa11.85□□□□□ -0.51
TRM5YHR070W ASN1P49089 572 aaKnown RBP11.85□□□□□ -0.51
TRM5YHR070W MNP1P53163 194 aaPredicted RBP11.85□□□□□ -0.51
TRM5YHR070W YDL206WQ12424 762 aa11.85□□□□□ -0.51
TRM5YHR070W TOM70P07213 617 aaKnown RBP11.84□□□□□ -0.51
TRM5YHR070W VID24P38263 362 aa11.84□□□□□ -0.51
TRM5YHR070W EFM4P40516 257 aa11.84□□□□□ -0.51
TRM5YHR070W SMC3P47037 1230 aa11.84□□□□□ -0.51
TRM5YHR070W APT1P49435 187 aaKnown RBP11.84□□□□□ -0.51
TRM5YHR070W ESBP6P53918 673 aa11.84□□□□□ -0.51
TRM5YHR070W PET123P17558 318 aa11.83□□□□□ -0.52
TRM5YHR070W AFT1P22149 690 aa11.83□□□□□ -0.52
TRM5YHR070W RAD57P25301 460 aa11.83□□□□□ -0.52
TRM5YHR070W TPO2P53283 614 aa11.83□□□□□ -0.52
TRM5YHR070W ULP1Q02724 621 aa11.83□□□□□ -0.52
TRM5YHR070W TRS130Q03660 1102 aa11.83□□□□□ -0.52
TRM5YHR070W OPY2Q06810 360 aa11.83□□□□□ -0.52
TRM5YHR070W YOR131CQ12486 218 aa11.83□□□□□ -0.52
TRM5YHR070W RTP1Q12751 981 aa11.83□□□□□ -0.52
TRM5YHR070W MOT1P32333 1867 aa11.83□□□□□ -0.52
TRM5YHR070W KIP1P28742 1111 aa11.82□□□□□ -0.52
TRM5YHR070W RAD54P32863 898 aa11.82□□□□□ -0.52
TRM5YHR070W MCX1P38323 520 aaPredicted RBP11.82□□□□□ -0.52
TRM5YHR070W CAJ1P39101 391 aa11.82□□□□□ -0.52
TRM5YHR070W AIM21P40563 679 aa11.82□□□□□ -0.52
TRM5YHR070W WHI2P12611 486 aa11.81□□□□□ -0.52
TRM5YHR070W MSS51P32335 436 aa11.81□□□□□ -0.52
TRM5YHR070W CDC11P32458 415 aa11.81□□□□□ -0.52
TRM5YHR070W JNM1P36224 373 aa11.81□□□□□ -0.52
TRM5YHR070W SCD6P45978 349 aaKnown RBP RIP-Chip data11.81□□□□□ -0.52not detected
TRM5YHR070W CUS1Q02554 436 aaPredicted RBP11.81□□□□□ -0.52
TRM5YHR070W MDM20Q12387 796 aaKnown RBP11.81□□□□□ -0.52
TRM5YHR070W TRP2P00899 507 aaKnown RBP11.81□□□□□ -0.52
TRM5YHR070W HXT8P40886 569 aa11.81□□□□□ -0.52
TRM5YHR070W BOP3P53958 396 aa11.81□□□□□ -0.52
TRM5YHR070W ZPS1Q12512 249 aa11.81□□□□□ -0.52
TRM5YHR070W IME1P21190 360 aa11.8□□□□□ -0.52
TRM5YHR070W HXT1P32465 570 aa11.8□□□□□ -0.52
TRM5YHR070W SWI3P32591 825 aa11.8□□□□□ -0.52
TRM5YHR070W MRX3P38172 270 aa11.8□□□□□ -0.52
TRM5YHR070W MMS4P38257 691 aa11.8□□□□□ -0.52
TRM5YHR070W KIC1P38692 1080 aa11.8□□□□□ -0.52
TRM5YHR070W SET5P38890 526 aaKnown RBP11.8□□□□□ -0.52
TRM5YHR070W VPS70P47161 811 aa11.8□□□□□ -0.52
TRM5YHR070W RPA49Q01080 415 aaPredicted RBP11.8□□□□□ -0.52
TRM5YHR070W TBF1Q02457 562 aa11.8□□□□□ -0.52
TRM5YHR070W YML082WQ04533 649 aaKnown RBP11.8□□□□□ -0.52
TRM5YHR070W SOV1Q04748 898 aa11.8□□□□□ -0.52
TRM5YHR070W RGA2Q06407 1009 aa11.8□□□□□ -0.52
TRM5YHR070W SHS1Q07657 551 aa11.8□□□□□ -0.52
Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms