RNA–Protein interactions for RNA: YER147C

SCC4, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC4YER147C NAM7P30771 971 aaKnown RBP12.83□□□□□ -0.36
SCC4YER147C UBP11P36026 717 aa12.83□□□□□ -0.36
SCC4YER147C PHM6Q05637 104 aa12.83□□□□□ -0.36
SCC4YER147C YLR462WO13556 202 aa12.82□□□□□ -0.36
SCC4YER147C PGK1P00560 416 aaKnown RBP12.82□□□□□ -0.36
SCC4YER147C SNF1P06782 633 aaKnown RBP12.82□□□□□ -0.36
SCC4YER147C RAD54P32863 898 aa12.82□□□□□ -0.36
SCC4YER147C YHL049CP38722 271 aa12.82□□□□□ -0.36
SCC4YER147C YEL075CP39972 122 aa12.82□□□□□ -0.36
SCC4YER147C YER189WP40104 122 aa12.82□□□□□ -0.36
SCC4YER147C YFL064CP43540 174 aa12.82□□□□□ -0.36
SCC4YER147C RIM8P53179 542 aa12.82□□□□□ -0.36
SCC4YER147C TIM8P57744 87 aa12.82□□□□□ -0.36
SCC4YER147C YBL111CQ3E7Y5 667 aa12.82□□□□□ -0.36
SCC4YER147C PYC1P11154 1178 aaKnown RBP12.82□□□□□ -0.36
SCC4YER147C YSW1P38280 609 aa12.82□□□□□ -0.36
SCC4YER147C DSN1P40568 576 aa12.82□□□□□ -0.36
SCC4YER147C NCS2P53923 493 aaPredicted RBP12.82□□□□□ -0.36
SCC4YER147C YMR187CQ03236 431 aa12.82□□□□□ -0.36
SCC4YER147C PRE10P21242 288 aaKnown RBP RIP-Chip data12.81□□□□□ -0.36not detected
SCC4YER147C OAF3P36023 863 aa12.81□□□□□ -0.36
SCC4YER147C TRZ1P36159 838 aaPredicted RBP12.81□□□□□ -0.36
SCC4YER147C HIS2P38635 335 aa12.81□□□□□ -0.36
SCC4YER147C SAK1P38990 1142 aa12.81□□□□□ -0.36
SCC4YER147C FIS1P40515 155 aa12.81□□□□□ -0.36
SCC4YER147C BRO1P48582 844 aa12.81□□□□□ -0.36
SCC4YER147C RAD18P10862 487 aa12.8□□□□□ -0.36
SCC4YER147C KIP1P28742 1111 aa12.8□□□□□ -0.36
SCC4YER147C SEC21P32074 935 aaKnown RBP12.8□□□□□ -0.36
SCC4YER147C SPC72P39723 622 aa12.8□□□□□ -0.36
SCC4YER147C NMD5P46970 1048 aa12.8□□□□□ -0.36
SCC4YER147C TDA9Q04545 1251 aa12.8□□□□□ -0.36
SCC4YER147C YLR326WQ06170 240 aaKnown RBP12.8□□□□□ -0.36
SCC4YER147C TCP1P12612 559 aaKnown RBP12.8□□□□□ -0.36
SCC4YER147C PRP16P15938 1071 aaPredicted RBP12.8□□□□□ -0.36
SCC4YER147C YSC83P32792 385 aa12.8□□□□□ -0.36
SCC4YER147C EXO5P38289 585 aa12.8□□□□□ -0.36
SCC4YER147C KAP123P40069 1113 aaKnown RBP12.8□□□□□ -0.36
SCC4YER147C NIT1P40447 199 aa12.8□□□□□ -0.36
SCC4YER147C SAP185P40856 1058 aa12.8□□□□□ -0.36
SCC4YER147C CDC10P25342 322 aaKnown RBP12.79□□□□□ -0.36
SCC4YER147C RRT2P38332 387 aa12.79□□□□□ -0.36
SCC4YER147C TMA64Q04600 565 aaKnown RBP12.79□□□□□ -0.36
SCC4YER147C DON1Q05610 365 aa12.79□□□□□ -0.36
SCC4YER147C DBP5P20449 482 aaKnown RBP12.78□□□□□ -0.36
SCC4YER147C ACA1P39970 489 aa12.78□□□□□ -0.36
SCC4YER147C SPT2P06843 333 aaPredicted RBP12.78□□□□□ -0.36
SCC4YER147C CDC33P07260 213 aaKnown RBP12.78□□□□□ -0.36
SCC4YER147C UTP6Q02354 440 aaKnown RBP12.78□□□□□ -0.36
SCC4YER147C YML037CQ03703 340 aa12.78□□□□□ -0.36
SCC4YER147C USA1Q03714 838 aa12.78□□□□□ -0.36
SCC4YER147C YDL206WQ12424 762 aa12.78□□□□□ -0.36
SCC4YER147C RKM4Q12504 494 aa12.78□□□□□ -0.36
SCC4YER147C SEY1Q99287 776 aa12.78□□□□□ -0.36
SCC4YER147C CBP1P07252 654 aa12.77□□□□□ -0.37
SCC4YER147C RPB2P08518 1224 aaKnown RBP12.77□□□□□ -0.37
SCC4YER147C ADH4P10127 382 aa12.77□□□□□ -0.37
SCC4YER147C HPR1P17629 752 aaKnown RBP12.77□□□□□ -0.37
SCC4YER147C ILV6P25605 309 aaKnown RBP12.77□□□□□ -0.37
SCC4YER147C ECM2P38241 364 aaKnown RBP12.77□□□□□ -0.37
SCC4YER147C TIF5P38431 405 aaKnown RBP12.77□□□□□ -0.37
SCC4YER147C MMS21P38632 267 aa12.77□□□□□ -0.37
SCC4YER147C MRX1P40050 688 aa12.77□□□□□ -0.37
SCC4YER147C SMX2P40204 77 aaKnown RBP12.77□□□□□ -0.37
SCC4YER147C YMR1P47147 688 aaKnown RBP RIP-Chip data12.77□□□□□ -0.37not detected
SCC4YER147C MTG1Q03151 367 aaPredicted RBP12.77□□□□□ -0.37
SCC4YER147C PIG1Q06216 648 aa12.77□□□□□ -0.37
SCC4YER147C SUB2Q07478 446 aaKnown RBP12.77□□□□□ -0.37
SCC4YER147C ATG20Q07528 640 aa12.77□□□□□ -0.37
SCC4YER147C CRD1Q07560 283 aa12.77□□□□□ -0.37
SCC4YER147C FRA1Q07825 749 aa12.77□□□□□ -0.37
SCC4YER147C GAP1P19145 602 aaPredicted RBP12.76□□□□□ -0.37
SCC4YER147C YME1P32795 747 aa12.76□□□□□ -0.37
SCC4YER147C LOS1P33418 1100 aaPredicted RBP12.76□□□□□ -0.37
SCC4YER147C TGL1P34163 548 aa12.76□□□□□ -0.37
SCC4YER147C SQT1P35184 431 aa12.76□□□□□ -0.37
SCC4YER147C URB2P47108 1174 aa12.76□□□□□ -0.37
SCC4YER147C YNL035CP53962 389 aaKnown RBP12.76□□□□□ -0.37
SCC4YER147C YDR338CQ05497 695 aa12.76□□□□□ -0.37
SCC4YER147C PNP1Q05788 311 aa12.76□□□□□ -0.37
SCC4YER147C SLX4Q12098 748 aa12.76□□□□□ -0.37
SCC4YER147C HIF1Q12373 385 aa12.76□□□□□ -0.37
SCC4YER147C YCR051WP25631 222 aa12.76□□□□□ -0.37
SCC4YER147C GCD6P32501 712 aaKnown RBP12.76□□□□□ -0.37
SCC4YER147C VPS70P47161 811 aa12.76□□□□□ -0.37
SCC4YER147C CPR6P53691 371 aaKnown RBP12.76□□□□□ -0.37
SCC4YER147C YDR278CQ05612 105 aa12.76□□□□□ -0.37
SCC4YER147C GUD1Q07729 489 aa12.76□□□□□ -0.37
SCC4YER147C JIP3O13555 125 aa12.75□□□□□ -0.37
SCC4YER147C PLC1P32383 869 aa12.75□□□□□ -0.37
SCC4YER147C TFC4P33339 1025 aa12.75□□□□□ -0.37
SCC4YER147C INA22P40576 216 aa12.75□□□□□ -0.37
SCC4YER147C ZPR1P53303 486 aaKnown RBP12.75□□□□□ -0.37
SCC4YER147C SAM1P10659 382 aaKnown RBP12.74□□□□□ -0.37
SCC4YER147C EUG1P32474 517 aa12.74□□□□□ -0.37
SCC4YER147C MUD1P32605 298 aaKnown RBP12.74□□□□□ -0.37
SCC4YER147C ERC1P38767 581 aa12.74□□□□□ -0.37
SCC4YER147C ATG36P46983 293 aa12.74□□□□□ -0.37
SCC4YER147C YGR117CP53270 476 aa12.74□□□□□ -0.37
SCC4YER147C RPL22BP56628 122 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 5,963 RNA–protein pairs in 31.1 ms