RNA–Protein interactions for RNA: YDR447C

RPS17B, Transcript of Ribosomal protein 51 (rp51) of the small (40s) subunit, yeast

Gene RPS17B, Length 411 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS17B	YDR447C	PGM1	P33401	570 aa	Known RBP	3.21	□□□□□ -1.9
RPS17B	YDR447C	SAF1	P38352	637 aa		3.21	□□□□□ -1.9
RPS17B	YDR447C	PMC1	P38929	1173 aa	Predicted RBP	3.21	□□□□□ -1.9
RPS17B	YDR447C	OAF1	P39720	1047 aa	Predicted RBP	3.21	□□□□□ -1.9
RPS17B	YDR447C	GTS1	P40956	396 aa		3.21	□□□□□ -1.9
RPS17B	YDR447C	NOG2	P53742	486 aa	Known RBP	3.21	□□□□□ -1.9
RPS17B	YDR447C	NSG2	P53898	299 aa		3.21	□□□□□ -1.9
RPS17B	YDR447C	SND1	Q04007	877 aa		3.21	□□□□□ -1.9
RPS17B	YDR447C	NHX1	Q04121	633 aa		3.21	□□□□□ -1.9
RPS17B	YDR447C	YOR378W	Q08902	515 aa		3.21	□□□□□ -1.9
RPS17B	YDR447C	GUP2	Q08929	609 aa		3.21	□□□□□ -1.9
RPS17B	YDR447C	SLX4	Q12098	748 aa		3.21	□□□□□ -1.9
RPS17B	YDR447C	PHM7	Q12252	991 aa		3.21	□□□□□ -1.9
RPS17B	YDR447C	RIB2	Q12362	591 aa	Known RBP	3.21	□□□□□ -1.9
RPS17B	YDR447C	YBR182C-A	Q8TGU6	64 aa		3.21	□□□□□ -1.9
RPS17B	YDR447C	CYS3	P31373	394 aa	Known RBP	3.2	□□□□□ -1.9
RPS17B	YDR447C	RPC82	P32349	654 aa		3.2	□□□□□ -1.9
RPS17B	YDR447C	PLC1	P32383	869 aa		3.2	□□□□□ -1.9
RPS17B	YDR447C	RPD3	P32561	433 aa		3.2	□□□□□ -1.9
RPS17B	YDR447C	STE13	P33894	931 aa		3.2	□□□□□ -1.9
RPS17B	YDR447C	RFC5	P38251	354 aa		3.2	□□□□□ -1.9
RPS17B	YDR447C	PTC7	P38797	343 aa		3.2	□□□□□ -1.9
RPS17B	YDR447C	RPN10	P38886	268 aa	Known RBP	3.2	□□□□□ -1.9
RPS17B	YDR447C	CEP3	P40969	608 aa		3.2	□□□□□ -1.9
RPS17B	YDR447C	ALY2	P47029	1046 aa		3.2	□□□□□ -1.9
RPS17B	YDR447C	UBC9	P50623	157 aa	Predicted RBP	3.2	□□□□□ -1.9
RPS17B	YDR447C	PEX14	P53112	341 aa		3.2	□□□□□ -1.9
RPS17B	YDR447C	YMR187C	Q03236	431 aa		3.2	□□□□□ -1.9
RPS17B	YDR447C	TRE2	Q08693	809 aa		3.2	□□□□□ -1.9
RPS17B	YDR447C	YTM1	Q12024	460 aa	Predicted RBP	3.2	□□□□□ -1.9
RPS17B	YDR447C	TMA7	Q3E764	64 aa	Known RBP	3.2	□□□□□ -1.9
RPS17B	YDR447C	SPS1	P08458	490 aa		3.19	□□□□□ -1.9
RPS17B	YDR447C	GCD1	P09032	578 aa	Predicted RBP	3.19	□□□□□ -1.9
RPS17B	YDR447C	MSB1	P21339	1137 aa	Known RBP	3.19	□□□□□ -1.9
RPS17B	YDR447C	APL1	P27351	700 aa		3.19	□□□□□ -1.9
RPS17B	YDR447C	CCR4	P31384	837 aa	Known RBP	3.19	□□□□□ -1.9
RPS17B	YDR447C	DAL3	P32459	195 aa		3.19	□□□□□ -1.9
RPS17B	YDR447C	TFC4	P33339	1025 aa		3.19	□□□□□ -1.9
RPS17B	YDR447C	TAT1	P38085	619 aa		3.19	□□□□□ -1.9
RPS17B	YDR447C	RLP7	P40693	322 aa	Known RBP	3.19	□□□□□ -1.9
RPS17B	YDR447C	GZF3	P42944	551 aa	Known RBP	3.19	□□□□□ -1.9
RPS17B	YDR447C	YNL034W	P53963	612 aa		3.19	□□□□□ -1.9
RPS17B	YDR447C	YNL018C	P53976	612 aa		3.19	□□□□□ -1.9
RPS17B	YDR447C	SSY1	Q03770	852 aa		3.19	□□□□□ -1.9
RPS17B	YDR447C	MCA1	Q08601	432 aa		3.19	□□□□□ -1.9
RPS17B	YDR447C	YLR122C	Q12312	125 aa		3.19	□□□□□ -1.9
RPS17B	YDR447C	MPD2	Q99316	277 aa		3.19	□□□□□ -1.9
RPS17B	YDR447C	RPS9A	O13516	197 aa	Known RBP	3.18	□□□□□ -1.9
RPS17B	YDR447C	DIF1	O13577	133 aa		3.18	□□□□□ -1.9
RPS17B	YDR447C	COQ2	P32378	372 aa		3.18	□□□□□ -1.9
RPS17B	YDR447C	SRP101	P32916	621 aa		3.18	□□□□□ -1.9
RPS17B	YDR447C	HSL7	P38274	827 aa		3.18	□□□□□ -1.9
RPS17B	YDR447C	SKN7	P38889	622 aa		3.18	□□□□□ -1.9
RPS17B	YDR447C	DOT6	P40059	670 aa	Known RBP	3.18	□□□□□ -1.9
RPS17B	YDR447C	GPP2	P40106	250 aa	Known RBP	3.18	□□□□□ -1.9
RPS17B	YDR447C	CCT5	P40413	562 aa	Known RBP	3.18	□□□□□ -1.9
RPS17B	YDR447C	DUG1	P43616	481 aa	Known RBP	3.18	□□□□□ -1.9
RPS17B	YDR447C	MNN11	P46985	422 aa	Known RBP	3.18	□□□□□ -1.9
RPS17B	YDR447C	NIT2	P47016	307 aa		3.18	□□□□□ -1.9
RPS17B	YDR447C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.18	□□□□□ -1.9	not detected
RPS17B	YDR447C	RAI1	P53063	387 aa	Known RBP	3.18	□□□□□ -1.9
RPS17B	YDR447C	ECM9	Q02202	377 aa		3.18	□□□□□ -1.9
RPS17B	YDR447C	YKR011C	Q02209	353 aa		3.18	□□□□□ -1.9
RPS17B	YDR447C	MSC2	Q03455	724 aa		3.18	□□□□□ -1.9
RPS17B	YDR447C	SSL1	Q04673	461 aa	Predicted RBP	3.18	□□□□□ -1.9
RPS17B	YDR447C	CDA1	Q06702	301 aa		3.18	□□□□□ -1.9
RPS17B	YDR447C	YOR022C	Q12204	715 aa		3.18	□□□□□ -1.9
RPS17B	YDR447C	Q0142	Q9ZZW4	58 aa		3.18	□□□□□ -1.9
RPS17B	YDR447C	KIN2	P13186	1147 aa	Known RBP	3.17	□□□□□ -1.9
RPS17B	YDR447C	CHS2	P14180	963 aa		3.17	□□□□□ -1.9
RPS17B	YDR447C	AEP2	P22136	580 aa		3.17	□□□□□ -1.9
RPS17B	YDR447C	HIR1	P32479	840 aa		3.17	□□□□□ -1.9
RPS17B	YDR447C	TYE7	P33122	291 aa	Predicted RBP	3.17	□□□□□ -1.9
RPS17B	YDR447C	SAP190	P36123	1033 aa		3.17	□□□□□ -1.9
RPS17B	YDR447C	YKR051W	P36142	418 aa		3.17	□□□□□ -1.9
RPS17B	YDR447C	SET5	P38890	526 aa	Known RBP	3.17	□□□□□ -1.9
RPS17B	YDR447C	PEA2	P40091	420 aa		3.17	□□□□□ -1.9
RPS17B	YDR447C	SHR5	P41912	237 aa		3.17	□□□□□ -1.9
RPS17B	YDR447C	RET2	P43621	546 aa		3.17	□□□□□ -1.9
RPS17B	YDR447C	DAS1	P47005	663 aa		3.17	□□□□□ -1.9
RPS17B	YDR447C	YGR153W	P48238	217 aa		3.17	□□□□□ -1.9
RPS17B	YDR447C	NPY1	P53164	384 aa		3.17	□□□□□ -1.9
RPS17B	YDR447C	YPL034W	Q03083	165 aa		3.17	□□□□□ -1.9
RPS17B	YDR447C	SIZ1	Q04195	904 aa		3.17	□□□□□ -1.9
RPS17B	YDR447C	CRR1	Q05790	422 aa		3.17	□□□□□ -1.9
RPS17B	YDR447C	THI21	Q08975	551 aa		3.17	□□□□□ -1.9
RPS17B	YDR447C	HAL9	Q12180	1030 aa		3.17	□□□□□ -1.9
RPS17B	YDR447C	LPX1	Q12405	387 aa	Known RBP	3.17	□□□□□ -1.9
RPS17B	YDR447C	YPR053C	Q6Q5F3	151 aa		3.17	□□□□□ -1.9
RPS17B	YDR447C	YLR149C	Q99296	730 aa		3.17	□□□□□ -1.9
RPS17B	YDR447C	PRC1	P00729	532 aa		3.16	□□□□□ -1.9
RPS17B	YDR447C	ATP4	P05626	244 aa		3.16	□□□□□ -1.9
RPS17B	YDR447C	PIF1	P07271	859 aa		3.16	□□□□□ -1.9
RPS17B	YDR447C	FBP1	P09201	348 aa		3.16	□□□□□ -1.9
RPS17B	YDR447C	RPS21A	P0C0V8	87 aa	Known RBP	3.16	□□□□□ -1.9
RPS17B	YDR447C	HSF1	P10961	833 aa		3.16	□□□□□ -1.9
RPS17B	YDR447C	SST2	P11972	698 aa	Known RBP	3.16	□□□□□ -1.9
RPS17B	YDR447C	ADP1	P25371	1049 aa		3.16	□□□□□ -1.9
RPS17B	YDR447C	SWE1	P32944	819 aa		3.16	□□□□□ -1.9
RPS17B	YDR447C	TDA3	P38758	523 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms