RNA–Protein interactions for RNA: YAL062W

GDH3, Transcript of NADP(+)-dependent glutamate dehydrogenase, yeast

Gene GDH3, Length 1,374 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GDH3	YAL062W	PPR1	P07272	904 aa	Predicted RBP	11.3	□□□□□ -0.6
GDH3	YAL062W	SPO12	P17123	173 aa		11.3	□□□□□ -0.6
GDH3	YAL062W	SMC2	P38989	1170 aa	Known RBP	11.3	□□□□□ -0.6
GDH3	YAL062W	SDS3	P40505	327 aa		11.3	□□□□□ -0.6
GDH3	YAL062W	PRY3	P47033	881 aa		11.3	□□□□□ -0.6
GDH3	YAL062W	ACF4	P47129	309 aa		11.3	□□□□□ -0.6
GDH3	YAL062W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	11.3	□□□□□ -0.6	not detected
GDH3	YAL062W	ERG5	P54781	538 aa		11.3	□□□□□ -0.6
GDH3	YAL062W	HFI1	Q12060	488 aa		11.3	□□□□□ -0.6
GDH3	YAL062W	SUT2	Q12286	268 aa		11.3	□□□□□ -0.6
GDH3	YAL062W	SNA3	P14359	133 aa		11.29	□□□□□ -0.6
GDH3	YAL062W	AFT1	P22149	690 aa		11.29	□□□□□ -0.6
GDH3	YAL062W	ATG3	P40344	310 aa		11.29	□□□□□ -0.6
GDH3	YAL062W	SHQ1	P40486	507 aa	Predicted RBP	11.29	□□□□□ -0.6
GDH3	YAL062W	AIM21	P40563	679 aa		11.29	□□□□□ -0.6
GDH3	YAL062W	YJR107W	P47145	328 aa		11.29	□□□□□ -0.6
GDH3	YAL062W	BRE5	P53741	515 aa	Known RBP	11.29	□□□□□ -0.6
GDH3	YAL062W	UTP14	Q04500	899 aa	Known RBP	11.29	□□□□□ -0.6
GDH3	YAL062W	ECM7	Q06200	448 aa		11.29	□□□□□ -0.6
GDH3	YAL062W	YPR078C	Q06813	372 aa		11.29	□□□□□ -0.6
GDH3	YAL062W	ATG11	Q12527	1178 aa		11.29	□□□□□ -0.6
GDH3	YAL062W	TUP1	P16649	713 aa		11.28	□□□□□ -0.6
GDH3	YAL062W	RRP43	P25359	394 aa	Predicted RBP	11.28	□□□□□ -0.6
GDH3	YAL062W	PDC6	P26263	563 aa	Known RBP	11.28	□□□□□ -0.6
GDH3	YAL062W	TMT1	P32643	299 aa		11.28	□□□□□ -0.6
GDH3	YAL062W	SMC1	P32908	1225 aa		11.28	□□□□□ -0.6
GDH3	YAL062W	YKL023W	P36103	277 aa	Known RBP	11.28	□□□□□ -0.6
GDH3	YAL062W	NPP2	P39997	493 aa		11.28	□□□□□ -0.6
GDH3	YAL062W	OSW7	P43611	510 aa		11.28	□□□□□ -0.6
GDH3	YAL062W	SMC3	P47037	1230 aa		11.28	□□□□□ -0.6
GDH3	YAL062W	CUL3	P53202	744 aa		11.28	□□□□□ -0.6
GDH3	YAL062W	ENV11	P53246	860 aa		11.28	□□□□□ -0.6
GDH3	YAL062W	DAK1	P54838	584 aa	Known RBP	11.28	□□□□□ -0.6
GDH3	YAL062W	YDR090C	Q03193	310 aa		11.28	□□□□□ -0.6
GDH3	YAL062W	UTP5	Q04177	643 aa	Known RBP	11.28	□□□□□ -0.6
GDH3	YAL062W	CSR1	Q06705	408 aa	Known RBP	11.28	□□□□□ -0.6
GDH3	YAL062W	XRS2	P33301	854 aa		11.28	□□□□□ -0.6
GDH3	YAL062W	NIP100	P33420	868 aa		11.28	□□□□□ -0.6
GDH3	YAL062W	CCC2	P38995	1004 aa		11.28	□□□□□ -0.6
GDH3	YAL062W	HOS3	Q02959	697 aa	Known RBP	11.28	□□□□□ -0.6
GDH3	YAL062W	SEC23	P15303	768 aa	Known RBP	11.27	□□□□□ -0.61
GDH3	YAL062W	VMA1	P17255	1071 aa	Known RBP	11.27	□□□□□ -0.61
GDH3	YAL062W	IES1	P43579	692 aa		11.27	□□□□□ -0.61
GDH3	YAL062W	HSH155	P49955	971 aa	Known RBP	11.27	□□□□□ -0.61
GDH3	YAL062W	ORC5	P50874	479 aa		11.27	□□□□□ -0.61
GDH3	YAL062W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	11.27	□□□□□ -0.61	not detected
GDH3	YAL062W	OPY2	Q06810	360 aa		11.27	□□□□□ -0.61
GDH3	YAL062W	RTP1	Q12751	981 aa		11.27	□□□□□ -0.61
GDH3	YAL062W	TOM1	Q03280	3268 aa		11.26	□□□□□ -0.61
GDH3	YAL062W	MTF2	P10849	440 aa		11.26	□□□□□ -0.61
GDH3	YAL062W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	11.26	□□□□□ -0.61	not detected
GDH3	YAL062W	TAD1	P53065	400 aa		11.26	□□□□□ -0.61
GDH3	YAL062W	ESBP6	P53918	673 aa		11.26	□□□□□ -0.61
GDH3	YAL062W	CUS1	Q02554	436 aa	Predicted RBP	11.26	□□□□□ -0.61
GDH3	YAL062W	ULP1	Q02724	621 aa		11.26	□□□□□ -0.61
GDH3	YAL062W	YDL206W	Q12424	762 aa		11.26	□□□□□ -0.61
GDH3	YAL062W	YOR131C	Q12486	218 aa		11.26	□□□□□ -0.61
GDH3	YAL062W	ECM29	P38737	1868 aa		11.26	□□□□□ -0.61
GDH3	YAL062W	MSS51	P32335	436 aa		11.25	□□□□□ -0.61
GDH3	YAL062W	AFG3	P39925	761 aa		11.25	□□□□□ -0.61
GDH3	YAL062W	RRD1	P40454	393 aa	Known RBP	11.25	□□□□□ -0.61
GDH3	YAL062W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	11.25	□□□□□ -0.61	RIP-Chip
GDH3	YAL062W	ASN1	P49089	572 aa	Known RBP	11.25	□□□□□ -0.61
GDH3	YAL062W	MNP1	P53163	194 aa	Predicted RBP	11.25	□□□□□ -0.61
GDH3	YAL062W	SLX4	Q12098	748 aa		11.25	□□□□□ -0.61
GDH3	YAL062W	MDM20	Q12387	796 aa	Known RBP	11.25	□□□□□ -0.61
GDH3	YAL062W	WHI2	P12611	486 aa		11.24	□□□□□ -0.61
GDH3	YAL062W	KIP1	P28742	1111 aa		11.24	□□□□□ -0.61
GDH3	YAL062W	STO1	P34160	861 aa	Known RBP	11.24	□□□□□ -0.61
GDH3	YAL062W	CAJ1	P39101	391 aa		11.24	□□□□□ -0.61
GDH3	YAL062W	APT1	P49435	187 aa	Known RBP	11.24	□□□□□ -0.61
GDH3	YAL062W	TRS130	Q03660	1102 aa		11.24	□□□□□ -0.61
GDH3	YAL062W	TSR1	Q07381	788 aa	Known RBP	11.24	□□□□□ -0.61
GDH3	YAL062W	YOL098C	Q12496	1037 aa		11.24	□□□□□ -0.61
GDH3	YAL062W	NAT1	P12945	854 aa	Known RBP	11.23	□□□□□ -0.61
GDH3	YAL062W	SKG6	P32900	734 aa	Predicted RBP	11.23	□□□□□ -0.61
GDH3	YAL062W	MRX3	P38172	270 aa		11.23	□□□□□ -0.61
GDH3	YAL062W	VID24	P38263	362 aa		11.23	□□□□□ -0.61
GDH3	YAL062W	MCX1	P38323	520 aa	Predicted RBP	11.23	□□□□□ -0.61
GDH3	YAL062W	FTR1	P40088	404 aa		11.23	□□□□□ -0.61
GDH3	YAL062W	EFM4	P40516	257 aa		11.23	□□□□□ -0.61
GDH3	YAL062W	HXT8	P40886	569 aa		11.23	□□□□□ -0.61
GDH3	YAL062W	MMM1	P41800	426 aa		11.23	□□□□□ -0.61
GDH3	YAL062W	SAD1	P43589	448 aa		11.23	□□□□□ -0.61
GDH3	YAL062W	RPA49	Q01080	415 aa	Predicted RBP	11.23	□□□□□ -0.61
GDH3	YAL062W	TOM70	P07213	617 aa	Known RBP	11.22	□□□□□ -0.61
GDH3	YAL062W	RAD54	P32863	898 aa		11.22	□□□□□ -0.61
GDH3	YAL062W	MMS4	P38257	691 aa		11.22	□□□□□ -0.61
GDH3	YAL062W	SEC9	P40357	651 aa		11.22	□□□□□ -0.61
GDH3	YAL062W	DAS2	Q12084	232 aa		11.22	□□□□□ -0.61
GDH3	YAL062W	TRP2	P00899	507 aa	Known RBP	11.21	□□□□□ -0.61
GDH3	YAL062W	PET123	P17558	318 aa		11.21	□□□□□ -0.61
GDH3	YAL062W	RAD57	P25301	460 aa		11.21	□□□□□ -0.61
GDH3	YAL062W	HXT1	P32465	570 aa		11.21	□□□□□ -0.61
GDH3	YAL062W	SWI3	P32591	825 aa		11.21	□□□□□ -0.61
GDH3	YAL062W	DUR3	P33413	735 aa		11.21	□□□□□ -0.61
GDH3	YAL062W	JNM1	P36224	373 aa		11.21	□□□□□ -0.61
GDH3	YAL062W	DAS1	P47005	663 aa		11.21	□□□□□ -0.61
GDH3	YAL062W	VPS70	P47161	811 aa		11.21	□□□□□ -0.61
GDH3	YAL062W	IWR1	Q07532	353 aa	Predicted RBP	11.21	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms