RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 SDF4Q9BRK5 362 aa6.55□□□□□ -1.36
SCN3A-210ENST00000640652 OVOS2A0A0G2JMS6 1433 aa6.55□□□□□ -1.36
SCN3A-210ENST00000640652 NPHP3Q7Z494 1330 aa6.55□□□□□ -1.36
SCN3A-210ENST00000640652 PI4KAP2A4QPH2 592 aa6.55□□□□□ -1.36
SCN3A-210ENST00000640652 AIMP1Q12904 312 aaKnown RBP6.55□□□□□ -1.36
SCN3A-210ENST00000640652 PDCL2Q8N4E4 241 aa6.55□□□□□ -1.36
SCN3A-210ENST00000640652 PI4KAP1Q8N8J0 262 aa6.55□□□□□ -1.36
SCN3A-210ENST00000640652 ROBO2Q9HCK4 1378 aa6.55□□□□□ -1.36
SCN3A-210ENST00000640652 SGSM2O43147 1006 aa6.55□□□□□ -1.36
SCN3A-210ENST00000640652 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.55□□□□□ -1.36
SCN3A-210ENST00000640652 MAP3K2Q9Y2U5 619 aa6.55□□□□□ -1.36
SCN3A-210ENST00000640652 DDIT3P35638 169 aa6.55□□□□□ -1.36
SCN3A-210ENST00000640652 ME1P48163 572 aa6.55□□□□□ -1.36
SCN3A-210ENST00000640652 TPD52L1Q16890 204 aaPredicted RBP6.55□□□□□ -1.36
SCN3A-210ENST00000640652 CCDC83Q8IWF9 413 aa6.55□□□□□ -1.36
SCN3A-210ENST00000640652 PKNOX2Q96KN3 472 aa6.55□□□□□ -1.36
SCN3A-210ENST00000640652 KIF2CQ99661 725 aa6.55□□□□□ -1.36
SCN3A-210ENST00000640652 HCLS1P14317 486 aaPredicted RBP6.55□□□□□ -1.36
SCN3A-210ENST00000640652 ANKLE2Q86XL3 938 aa6.55□□□□□ -1.36
SCN3A-210ENST00000640652 CCDC112Q8NEF3 446 aa6.55□□□□□ -1.36
SCN3A-210ENST00000640652 ZRANB1Q9UGI0 708 aa6.55□□□□□ -1.36
SCN3A-210ENST00000640652 CTNNA3Q9UI47 895 aa6.55□□□□□ -1.36
SCN3A-210ENST00000640652 ANKRD36CQ5JPF3 1778 aa6.55□□□□□ -1.36
SCN3A-210ENST00000640652 IGSF1Q8N6C5 1336 aa6.55□□□□□ -1.36
SCN3A-210ENST00000640652 GRM8O00222 908 aa6.54□□□□□ -1.36
SCN3A-210ENST00000640652 RUFY3Q7L099 469 aa6.54□□□□□ -1.36
SCN3A-210ENST00000640652 PAXBP1Q9Y5B6 917 aa6.54□□□□□ -1.36
SCN3A-210ENST00000640652 TPM1P09493 284 aa6.54□□□□□ -1.36
SCN3A-210ENST00000640652 CEP170BQ9Y4F5 1589 aaPredicted RBP6.54□□□□□ -1.36
SCN3A-210ENST00000640652 GPT2Q8TD30 523 aa6.54□□□□□ -1.36
SCN3A-210ENST00000640652 CCDC171Q6TFL3 1326 aa6.54□□□□□ -1.36
SCN3A-210ENST00000640652 ECM29Q5VYK3 1845 aa6.54□□□□□ -1.36
SCN3A-210ENST00000640652 TEX35Q5T0J7 233 aa6.54□□□□□ -1.36
SCN3A-210ENST00000640652 ATL3Q6DD88 541 aa6.54□□□□□ -1.36
SCN3A-210ENST00000640652 ZNF592Q92610 1267 aa6.54□□□□□ -1.36
SCN3A-210ENST00000640652 AK2P54819 239 aa6.54□□□□□ -1.36
SCN3A-210ENST00000640652 OLFM4Q6UX06 510 aa6.54□□□□□ -1.36
SCN3A-210ENST00000640652 MARF1Q9Y4F3 1742 aaKnown RBP6.54□□□□□ -1.36
SCN3A-210ENST00000640652 GSDMDP57764 484 aa6.54□□□□□ -1.36
SCN3A-210ENST00000640652 SIL1Q9H173 461 aa6.54□□□□□ -1.36
SCN3A-210ENST00000640652 TATP17735 454 aaPredicted RBP6.53□□□□□ -1.36
SCN3A-210ENST00000640652 SSH3Q8TE77 659 aa6.53□□□□□ -1.36
SCN3A-210ENST00000640652 SAFBQ15424 915 aaKnown RBP eCLIP6.53□□□□□ -1.36
SCN3A-210ENST00000640652 AKAP4Q5JQC9 854 aa6.53□□□□□ -1.36
SCN3A-210ENST00000640652 KSR2Q6VAB6 950 aa6.53□□□□□ -1.36
SCN3A-210ENST00000640652 TMEM87AQ8NBN3 555 aa6.53□□□□□ -1.36
SCN3A-210ENST00000640652 DNAJC2Q99543 621 aaKnown RBP6.53□□□□□ -1.36
SCN3A-210ENST00000640652 NLRP2Q9NX02 1062 aa6.53□□□□□ -1.36
SCN3A-210ENST00000640652 EYA1Q99502 592 aa6.53□□□□□ -1.36
SCN3A-210ENST00000640652 HOXC9P31274 260 aa6.53□□□□□ -1.36
SCN3A-210ENST00000640652 PTPRUQ92729 1446 aa6.53□□□□□ -1.36
SCN3A-210ENST00000640652 PNMA6EA0A0J9YXQ4 647 aa6.53□□□□□ -1.36
SCN3A-210ENST00000640652 RBM10P98175 930 aaKnown RBP6.53□□□□□ -1.36
SCN3A-210ENST00000640652 KRT24Q2M2I5 525 aa6.53□□□□□ -1.36
SCN3A-210ENST00000640652 PIBF1Q8WXW3 757 aa6.53□□□□□ -1.36
SCN3A-210ENST00000640652 TM6SF1Q9BZW5 370 aa6.53□□□□□ -1.36
SCN3A-210ENST00000640652 RBSNQ9H1K0 784 aa6.53□□□□□ -1.36
SCN3A-210ENST00000640652 CLIP2Q9UDT6 1046 aa6.53□□□□□ -1.36
SCN3A-210ENST00000640652 ATF3P18847 181 aa6.53□□□□□ -1.36
SCN3A-210ENST00000640652 HOMER1Q86YM7 354 aa6.53□□□□□ -1.36
SCN3A-210ENST00000640652 PHF8Q9UPP1 1060 aa6.53□□□□□ -1.36
SCN3A-210ENST00000640652 GPS2Q13227 327 aa6.53□□□□□ -1.36
SCN3A-210ENST00000640652 C5P01031 1676 aa6.53□□□□□ -1.36
SCN3A-210ENST00000640652 CRB1P82279 1406 aa6.53□□□□□ -1.36
SCN3A-210ENST00000640652 SYT1P21579 422 aa6.52□□□□□ -1.36
SCN3A-210ENST00000640652 SART3Q15020 963 aaKnown RBP6.52□□□□□ -1.36
SCN3A-210ENST00000640652 NEUROD6Q96NK8 337 aa6.52□□□□□ -1.36
SCN3A-210ENST00000640652 KAT6AQ92794 2004 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 ZNF142P52746 1687 aaPredicted RBP6.52□□□□□ -1.37
SCN3A-210ENST00000640652 STK38Q15208 465 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.52□□□□□ -1.37
SCN3A-210ENST00000640652 GDPD2Q9HCC8 539 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 ITGB4P16144 1822 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 CBFA2T2O43439 604 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 CAMK4Q16566 473 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 ANKRD20A12PQ8NF67 263 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 ANO10Q9NW15 660 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 CRYBG1Q9Y4K1 1723 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 NOLC1Q14978 699 aaKnown RBP eCLIP6.52□□□□□ -1.37
SCN3A-210ENST00000640652 ZSCAN25Q6NSZ9 544 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 LINS1Q8NG48 757 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 CCDC94Q9BW85 323 aaPredicted RBP6.52□□□□□ -1.37
SCN3A-210ENST00000640652 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.52□□□□□ -1.37
SCN3A-210ENST00000640652 MYL6BP14649 208 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 CUL4AQ13619 759 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 CCDC158Q5M9N0 1113 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 ZNF771Q7L3S4 317 aaPredicted RBP6.52□□□□□ -1.37
SCN3A-210ENST00000640652 TMEM63CQ9P1W3 806 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 CGNQ9P2M7 1197 aaKnown RBP6.52□□□□□ -1.37
SCN3A-210ENST00000640652 LOXHD1Q8IVV2 1947 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 ELP1O95163 1332 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 CCDC66A2RUB6 948 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 SFPQP23246 707 aaKnown RBP eCLIP6.52□□□□□ -1.37
SCN3A-210ENST00000640652 TYRO3Q06418 890 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 PKP1Q13835 747 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 KIF6Q6ZMV9 814 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 KIF18AQ8NI77 898 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 IP6K1Q92551 441 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 USP44Q9H0E7 712 aa6.52□□□□□ -1.37
SCN3A-210ENST00000640652 TBX22Q9Y458 520 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms