RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 ATP2B3Q16720 1220 aa20.51■□□□□ 0.87
SCARB2-223ENST00000640640 ANO10Q9NW15 660 aa20.51■□□□□ 0.87
SCARB2-223ENST00000640640 GOLGA8AA7E2F4 631 aa20.51■□□□□ 0.87
SCARB2-223ENST00000640640 HSPA2P54652 639 aa20.51■□□□□ 0.87
SCARB2-223ENST00000640640 PLXNC1O60486 1568 aa20.51■□□□□ 0.87
SCARB2-223ENST00000640640 SIRT1Q96EB6 747 aa20.5■□□□□ 0.87
SCARB2-223ENST00000640640 DDX19AQ9NUU7 478 aaKnown RBP20.5■□□□□ 0.87
SCARB2-223ENST00000640640 KDM5AP29375 1690 aaKnown RBP20.5■□□□□ 0.87
SCARB2-223ENST00000640640 PPFIA3O75145 1194 aa20.5■□□□□ 0.87
SCARB2-223ENST00000640640 ORC3Q9UBD5 711 aaPredicted RBP20.5■□□□□ 0.87
SCARB2-223ENST00000640640 ERVK-7P63135 1459 aa20.5■□□□□ 0.87
SCARB2-223ENST00000640640 ZFYP08048 801 aaPredicted RBP20.5■□□□□ 0.87
SCARB2-223ENST00000640640 CHMLP26374 656 aa20.5■□□□□ 0.87
SCARB2-223ENST00000640640 UBE2HP62256 183 aa20.5■□□□□ 0.87
SCARB2-223ENST00000640640 ZNF771Q7L3S4 317 aaPredicted RBP20.5■□□□□ 0.87
SCARB2-223ENST00000640640 NCOA7Q8NI08 942 aa20.5■□□□□ 0.87
SCARB2-223ENST00000640640 OTUD7AQ8TE49 926 aaPredicted RBP20.5■□□□□ 0.87
SCARB2-223ENST00000640640 USP25Q9UHP3 1055 aa20.5■□□□□ 0.87
SCARB2-223ENST00000640640 POLR3DP05423 398 aaPredicted RBP20.5■□□□□ 0.87
SCARB2-223ENST00000640640 ZSCAN22P10073 491 aaPredicted RBP20.5■□□□□ 0.87
SCARB2-223ENST00000640640 TNNT3P45378 269 aaPredicted RBP20.5■□□□□ 0.87
SCARB2-223ENST00000640640 RBM27Q9P2N5 1060 aaKnown RBP20.49■□□□□ 0.87
SCARB2-223ENST00000640640 HOXB7P09629 217 aa20.49■□□□□ 0.87
SCARB2-223ENST00000640640 MCMDC2Q4G0Z9 681 aa20.49■□□□□ 0.87
SCARB2-223ENST00000640640 CCDC112Q8NEF3 446 aa20.49■□□□□ 0.87
SCARB2-223ENST00000640640 UQCRFS1P1P0C7P4 283 aa20.49■□□□□ 0.87
SCARB2-223ENST00000640640 TEX35Q5T0J7 233 aa20.49■□□□□ 0.87
SCARB2-223ENST00000640640 CFAP100Q494V2 611 aa20.49■□□□□ 0.87
SCARB2-223ENST00000640640 MICU3Q86XE3 530 aa20.49■□□□□ 0.87
SCARB2-223ENST00000640640 USP26Q9BXU7 913 aa20.49■□□□□ 0.87
SCARB2-223ENST00000640640 LGR6Q9HBX8 967 aa20.49■□□□□ 0.87
SCARB2-223ENST00000640640 ZNHIT6Q9NWK9 470 aaKnown RBP20.49■□□□□ 0.87
SCARB2-223ENST00000640640 IARSP41252 1262 aaKnown RBP20.48■□□□□ 0.87
SCARB2-223ENST00000640640 LRRC2Q9BYS8 371 aa20.48■□□□□ 0.87
SCARB2-223ENST00000640640 KDM5DQ9BY66 1539 aa20.48■□□□□ 0.87
SCARB2-223ENST00000640640 UGGT1Q9NYU2 1555 aa20.48■□□□□ 0.87
SCARB2-223ENST00000640640 HMGB2P26583 209 aaKnown RBP20.48■□□□□ 0.87
SCARB2-223ENST00000640640 NMIQ13287 307 aaPredicted RBP20.48■□□□□ 0.87
SCARB2-223ENST00000640640 ZNF790Q6PG37 636 aa20.48■□□□□ 0.87
SCARB2-223ENST00000640640 CTAGE5O15320 804 aa20.47■□□□□ 0.87
SCARB2-223ENST00000640640 FSIP1Q8NA03 581 aa20.47■□□□□ 0.87
SCARB2-223ENST00000640640 MCM5P33992 734 aa20.47■□□□□ 0.87
SCARB2-223ENST00000640640 TMEM67Q5HYA8 995 aa20.47■□□□□ 0.87
SCARB2-223ENST00000640640 ZHX3Q9H4I2 956 aa20.47■□□□□ 0.87
SCARB2-223ENST00000640640 PLA2R1Q13018 1463 aa20.47■□□□□ 0.87
SCARB2-223ENST00000640640 PREX2Q70Z35 1606 aa20.47■□□□□ 0.87
SCARB2-223ENST00000640640 RAB11FIP4Q86YS3 637 aa20.46■□□□□ 0.87
SCARB2-223ENST00000640640 RBM10P98175 930 aaKnown RBP20.46■□□□□ 0.87
SCARB2-223ENST00000640640 SSRP1Q08945 709 aaKnown RBP20.46■□□□□ 0.87
SCARB2-223ENST00000640640 CAGE1Q8TC20 777 aa20.46■□□□□ 0.87
SCARB2-223ENST00000640640 BICC1Q9H694 974 aaKnown RBP20.46■□□□□ 0.87
SCARB2-223ENST00000640640 ZFYVE16Q7Z3T8 1539 aa20.46■□□□□ 0.87
SCARB2-223ENST00000640640 CCDC152Q4G0S7 254 aa20.46■□□□□ 0.87
SCARB2-223ENST00000640640 SSBP05455 408 aaKnown RBP eCLIP20.45■□□□□ 0.86
SCARB2-223ENST00000640640 HSP90B2PQ58FF3 399 aa20.45■□□□□ 0.86
SCARB2-223ENST00000640640 NBPF6Q5VWK0 638 aa20.45■□□□□ 0.86
SCARB2-223ENST00000640640 NBPF4Q96M43 638 aa20.45■□□□□ 0.86
SCARB2-223ENST00000640640 RBM25P49756 843 aaKnown RBP20.45■□□□□ 0.86
SCARB2-223ENST00000640640 MFSD6Q6ZSS7 791 aa20.45■□□□□ 0.86
SCARB2-223ENST00000640640 ZNF444Q8N0Y2 327 aaPredicted RBP20.45■□□□□ 0.86
SCARB2-223ENST00000640640 PPP1R1BQ9UD71 204 aaPredicted RBP20.45■□□□□ 0.86
SCARB2-223ENST00000640640 CCDC144CPQ8IYA2 1237 aa20.45■□□□□ 0.86
SCARB2-223ENST00000640640 FAM177A1Q8N128 213 aaPredicted RBP20.45■□□□□ 0.86
SCARB2-223ENST00000640640 ZSCAN23Q3MJ62 389 aa20.44■□□□□ 0.86
SCARB2-223ENST00000640640 ACBD3Q9H3P7 528 aa20.44■□□□□ 0.86
SCARB2-223ENST00000640640 BMP2KQ9NSY1 1161 aaPredicted RBP20.44■□□□□ 0.86
SCARB2-223ENST00000640640 SF3B2Q13435 895 aaKnown RBP20.44■□□□□ 0.86
SCARB2-223ENST00000640640 ZSCAN16Q9H4T2 348 aaPredicted RBP20.44■□□□□ 0.86
SCARB2-223ENST00000640640 PAG1Q9NWQ8 432 aa20.44■□□□□ 0.86
SCARB2-223ENST00000640640 MLH3Q9UHC1 1453 aa20.44■□□□□ 0.86
SCARB2-223ENST00000640640 USP19O94966 1318 aa20.44■□□□□ 0.86
SCARB2-223ENST00000640640 KLF18A0A0U1RQI7 1052 aa20.44■□□□□ 0.86
SCARB2-223ENST00000640640 METAP2P50579 478 aaKnown RBP eCLIP20.44■□□□□ 0.86
SCARB2-223ENST00000640640 ZGPATQ8N5A5 531 aaKnown RBP20.44■□□□□ 0.86
SCARB2-223ENST00000640640 PHF23Q9BUL5 403 aaPredicted RBP20.44■□□□□ 0.86
SCARB2-223ENST00000640640 MYOM2P54296 1465 aa20.44■□□□□ 0.86
SCARB2-223ENST00000640640 RAB3GAP1Q15042 981 aa20.44■□□□□ 0.86
SCARB2-223ENST00000640640 CT47A1Q5JQC4 288 aaPredicted RBP20.44■□□□□ 0.86
SCARB2-223ENST00000640640 CATIPQ7Z7H3 387 aa20.44■□□□□ 0.86
SCARB2-223ENST00000640640 RPGRQ92834 1020 aaKnown RBP20.43■□□□□ 0.86
SCARB2-223ENST00000640640 ACSBG1Q96GR2 724 aa20.43■□□□□ 0.86
SCARB2-223ENST00000640640 DDB1Q16531 1140 aa20.43■□□□□ 0.86
SCARB2-223ENST00000640640 ATP6V1AP38606 617 aa20.43■□□□□ 0.86
SCARB2-223ENST00000640640 TRMT2AQ8IZ69 625 aaKnown RBP20.43■□□□□ 0.86
SCARB2-223ENST00000640640 SFPQP23246 707 aaKnown RBP eCLIP20.42■□□□□ 0.86
SCARB2-223ENST00000640640 AK2P54819 239 aa20.42■□□□□ 0.86
SCARB2-223ENST00000640640 TFCP2Q12800 502 aa20.42■□□□□ 0.86
SCARB2-223ENST00000640640 SLC9C2Q5TAH2 1124 aa20.42■□□□□ 0.86
SCARB2-223ENST00000640640 RUFY1Q96T51 708 aa20.42■□□□□ 0.86
SCARB2-223ENST00000640640 PNMA6EA0A0J9YXQ4 647 aa20.42■□□□□ 0.86
SCARB2-223ENST00000640640 ZNF165P49910 485 aa20.42■□□□□ 0.86
SCARB2-223ENST00000640640 SEC63Q9UGP8 760 aaKnown RBP20.42■□□□□ 0.86
SCARB2-223ENST00000640640 KIAA0232Q92628 1395 aa20.41■□□□□ 0.86
SCARB2-223ENST00000640640 HCLS1P14317 486 aaPredicted RBP20.41■□□□□ 0.86
SCARB2-223ENST00000640640 CNPY2Q9Y2B0 182 aa20.41■□□□□ 0.86
SCARB2-223ENST00000640640 UQCRHLA0A096LP55 91 aa20.41■□□□□ 0.86
SCARB2-223ENST00000640640 UQCRHP07919 91 aa20.41■□□□□ 0.86
SCARB2-223ENST00000640640 Q6ZUG5 572 aa20.41■□□□□ 0.86
SCARB2-223ENST00000640640 NBPF7P0C2Y1 421 aaPredicted RBP20.41■□□□□ 0.86
SCARB2-223ENST00000640640 PCDH11XQ9BZA7 1347 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms