RNA–Protein interactions for RNA: ENST00000640360.1

SLC35A3-220, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5

Gene SLC35A3, Length 4,437 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-220ENST00000640360 ZNF496Q96IT1 587 aaPredicted RBP12.63□□□□□ -0.39
SLC35A3-220ENST00000640360 DENND2AQ9ULE3 1009 aa12.63□□□□□ -0.39
SLC35A3-220ENST00000640360 NOL7Q9UMY1 257 aaKnown RBP12.63□□□□□ -0.39
SLC35A3-220ENST00000640360 CDC42BPGQ6DT37 1551 aa12.63□□□□□ -0.39
SLC35A3-220ENST00000640360 RAD50Q92878 1312 aa12.62□□□□□ -0.39
SLC35A3-220ENST00000640360 DBNDD2Q9BQY9 259 aa12.62□□□□□ -0.39
SLC35A3-220ENST00000640360 ZBTB3Q9H5J0 574 aa12.62□□□□□ -0.39
SLC35A3-220ENST00000640360 SNAP23O00161 211 aa12.62□□□□□ -0.39
SLC35A3-220ENST00000640360 F13A1P00488 732 aa12.62□□□□□ -0.39
SLC35A3-220ENST00000640360 TFCP2Q12800 502 aa12.62□□□□□ -0.39
SLC35A3-220ENST00000640360 HSP90AA4PQ58FG1 418 aa12.62□□□□□ -0.39
SLC35A3-220ENST00000640360 ANKRD26Q9UPS8 1709 aa12.62□□□□□ -0.39
SLC35A3-220ENST00000640360 GIGYF1O75420 1035 aaPredicted RBP12.62□□□□□ -0.39
SLC35A3-220ENST00000640360 RXRAP19793 462 aa12.62□□□□□ -0.39
SLC35A3-220ENST00000640360 CREB3L3Q68CJ9 461 aa12.62□□□□□ -0.39
SLC35A3-220ENST00000640360 ZHX1Q9UKY1 873 aaPredicted RBP12.62□□□□□ -0.39
SLC35A3-220ENST00000640360 MTMR6Q9Y217 621 aa12.62□□□□□ -0.39
SLC35A3-220ENST00000640360 DRC7Q8IY82 874 aa12.61□□□□□ -0.39
SLC35A3-220ENST00000640360 ZNF592Q92610 1267 aa12.61□□□□□ -0.39
SLC35A3-220ENST00000640360 TTC14Q96N46 770 aa12.61□□□□□ -0.39
SLC35A3-220ENST00000640360 FMNL2Q96PY5 1086 aa12.61□□□□□ -0.39
SLC35A3-220ENST00000640360 DACT1Q9NYF0 836 aa12.61□□□□□ -0.39
SLC35A3-220ENST00000640360 CBX1P83916 185 aa12.61□□□□□ -0.39
SLC35A3-220ENST00000640360 G3BP1Q13283 466 aaKnown RBP eCLIP12.61□□□□□ -0.39
SLC35A3-220ENST00000640360 ECHDC1Q9NTX5 307 aa12.61□□□□□ -0.39
SLC35A3-220ENST00000640360 PTGS1P23219 599 aa12.61□□□□□ -0.39
SLC35A3-220ENST00000640360 PDLIM2Q96JY6 352 aa12.6□□□□□ -0.39
SLC35A3-220ENST00000640360 PXDNQ92626 1479 aa12.6□□□□□ -0.39
SLC35A3-220ENST00000640360 WDR33Q9C0J8 1336 aaKnown RBP12.6□□□□□ -0.39
SLC35A3-220ENST00000640360 RNMTO43148 476 aaKnown RBP12.59□□□□□ -0.39
SLC35A3-220ENST00000640360 NR1I2O75469 434 aa12.59□□□□□ -0.39
SLC35A3-220ENST00000640360 CLEC17AQ6ZS10 378 aa12.59□□□□□ -0.39
SLC35A3-220ENST00000640360 BRF1Q92994 677 aa12.59□□□□□ -0.39
SLC35A3-220ENST00000640360 STAP2Q9UGK3 403 aa12.59□□□□□ -0.39
SLC35A3-220ENST00000640360 CYP46A1Q9Y6A2 500 aa12.59□□□□□ -0.39
SLC35A3-220ENST00000640360 HAP1P54257 671 aaPredicted RBP12.59□□□□□ -0.39
SLC35A3-220ENST00000640360 INCENPQ9NQS7 918 aa12.59□□□□□ -0.39
SLC35A3-220ENST00000640360 C16orf45Q96MC5 204 aaPredicted RBP12.59□□□□□ -0.39
SLC35A3-220ENST00000640360 DNAJC25Q9H1X3 360 aa12.59□□□□□ -0.39
SLC35A3-220ENST00000640360 UBE2Q2LH0YL09 131 aa12.59□□□□□ -0.39
SLC35A3-220ENST00000640360 GRM8O00222 908 aa12.59□□□□□ -0.39
SLC35A3-220ENST00000640360 GOLIM4O00461 696 aa12.59□□□□□ -0.39
SLC35A3-220ENST00000640360 SLC27A2O14975 620 aa12.59□□□□□ -0.39
SLC35A3-220ENST00000640360 A1BGP04217 495 aa12.59□□□□□ -0.39
SLC35A3-220ENST00000640360 POLA2Q14181 598 aa12.59□□□□□ -0.39
SLC35A3-220ENST00000640360 CCDC144CPQ8IYA2 1237 aa12.59□□□□□ -0.39
SLC35A3-220ENST00000640360 DBNLQ9UJU6 430 aaKnown RBP12.59□□□□□ -0.39
SLC35A3-220ENST00000640360 BICD2Q8TD16 824 aa12.58□□□□□ -0.4
SLC35A3-220ENST00000640360 PUS3Q9BZE2 481 aaKnown RBP12.58□□□□□ -0.4
SLC35A3-220ENST00000640360 NKX2-3Q8TAU0 364 aa12.58□□□□□ -0.4
SLC35A3-220ENST00000640360 KCNF1Q9H3M0 494 aa12.58□□□□□ -0.4
SLC35A3-220ENST00000640360 COL15A1P39059 1388 aa12.58□□□□□ -0.4
SLC35A3-220ENST00000640360 BIN1O00499 593 aa12.58□□□□□ -0.4
SLC35A3-220ENST00000640360 APOBRQ0VD83 1088 aa12.58□□□□□ -0.4
SLC35A3-220ENST00000640360 DBF4Q9UBU7 674 aaPredicted RBP12.58□□□□□ -0.4
SLC35A3-220ENST00000640360 FKBP4Q02790 459 aaKnown RBP eCLIP12.57□□□□□ -0.4
SLC35A3-220ENST00000640360 TTLL7Q6ZT98 887 aa12.57□□□□□ -0.4
SLC35A3-220ENST00000640360 A0A087WZG4 1122 aa12.57□□□□□ -0.4
SLC35A3-220ENST00000640360 GOLGA6L4A6NEF3 574 aa12.57□□□□□ -0.4
SLC35A3-220ENST00000640360 GLRX3O76003 335 aaKnown RBP12.57□□□□□ -0.4
SLC35A3-220ENST00000640360 CCDC82Q8N4S0 544 aa12.57□□□□□ -0.4
SLC35A3-220ENST00000640360 IP6K1Q92551 441 aa12.57□□□□□ -0.4
SLC35A3-220ENST00000640360 TRMT1Q9NXH9 659 aaKnown RBP12.57□□□□□ -0.4
SLC35A3-220ENST00000640360 POLR3DP05423 398 aaPredicted RBP12.57□□□□□ -0.4
SLC35A3-220ENST00000640360 LRRC24Q50LG9 513 aa12.57□□□□□ -0.4
SLC35A3-220ENST00000640360 LMBR1LQ6UX01 489 aa12.57□□□□□ -0.4
SLC35A3-220ENST00000640360 CCDC171Q6TFL3 1326 aa12.57□□□□□ -0.4
SLC35A3-220ENST00000640360 ARHGEF10O15013 1369 aa12.57□□□□□ -0.4
SLC35A3-220ENST00000640360 ANO6Q4KMQ2 910 aa12.56□□□□□ -0.4
SLC35A3-220ENST00000640360 KDRP35968 1356 aa12.56□□□□□ -0.4
SLC35A3-220ENST00000640360 NOLC1Q14978 699 aaKnown RBP eCLIP12.56□□□□□ -0.4
SLC35A3-220ENST00000640360 PDIA6Q15084 440 aa12.56□□□□□ -0.4
SLC35A3-220ENST00000640360 Q6ZUG5 572 aa12.56□□□□□ -0.4
SLC35A3-220ENST00000640360 MBD3O95983 291 aa12.56□□□□□ -0.4
SLC35A3-220ENST00000640360 KSR2Q6VAB6 950 aa12.56□□□□□ -0.4
SLC35A3-220ENST00000640360 C3P01024 1663 aa12.56□□□□□ -0.4
SLC35A3-220ENST00000640360 USP31Q70CQ4 1352 aa12.55□□□□□ -0.4
SLC35A3-220ENST00000640360 ZKSCAN1P17029 563 aaPredicted RBP12.55□□□□□ -0.4
SLC35A3-220ENST00000640360 TOB2Q14106 344 aaPredicted RBP12.55□□□□□ -0.4
SLC35A3-220ENST00000640360 NECTIN1Q15223 517 aa12.55□□□□□ -0.4
SLC35A3-220ENST00000640360 BLOC1S2Q6QNY1 142 aa12.55□□□□□ -0.4
SLC35A3-220ENST00000640360 CCDC186Q7Z3E2 898 aa12.55□□□□□ -0.4
SLC35A3-220ENST00000640360 FILIP1Q7Z7B0 1213 aa12.55□□□□□ -0.4
SLC35A3-220ENST00000640360 TMX1Q9H3N1 280 aa12.55□□□□□ -0.4
SLC35A3-220ENST00000640360 STOX1Q6ZVD7 989 aa12.55□□□□□ -0.4
SLC35A3-220ENST00000640360 THEMISQ8N1K5 641 aaPredicted RBP12.55□□□□□ -0.4
SLC35A3-220ENST00000640360 STRN4Q9NRL3 753 aa12.55□□□□□ -0.4
SLC35A3-220ENST00000640360 CYP21A2P08686 494 aa12.54□□□□□ -0.4
SLC35A3-220ENST00000640360 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.54□□□□□ -0.4
SLC35A3-220ENST00000640360 CCDC183Q5T5S1 534 aa12.54□□□□□ -0.4
SLC35A3-220ENST00000640360 PGBD1Q96JS3 809 aa12.54□□□□□ -0.4
SLC35A3-220ENST00000640360 SETD1AO15047 1707 aaKnown RBP12.54□□□□□ -0.4
SLC35A3-220ENST00000640360 GPTP24298 496 aa12.54□□□□□ -0.4
SLC35A3-220ENST00000640360 GOLGA8FQ08AF8 430 aa12.54□□□□□ -0.4
SLC35A3-220ENST00000640360 GOLGA8DPQ0D2H9 430 aa12.54□□□□□ -0.4
SLC35A3-220ENST00000640360 KIAA2012Q0VF49 1180 aa12.54□□□□□ -0.4
SLC35A3-220ENST00000640360 PLEKHO1Q53GL0 409 aaPredicted RBP12.54□□□□□ -0.4
SLC35A3-220ENST00000640360 ZNF790Q6PG37 636 aa12.54□□□□□ -0.4
SLC35A3-220ENST00000640360 SPATA32Q96LK8 384 aa12.54□□□□□ -0.4
SLC35A3-220ENST00000640360 AIFM3Q96NN9 605 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms