RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 L3MBTL3Q96JM7 780 aaPredicted RBP22.12■■□□□ 1.13
SMN2-216ENST00000638794 HOXA10P31260 410 aaPredicted RBP22.11■■□□□ 1.13
SMN2-216ENST00000638794 IARSP41252 1262 aaKnown RBP22.11■■□□□ 1.13
SMN2-216ENST00000638794 CHADLQ6NUI6 762 aa22.11■■□□□ 1.13
SMN2-216ENST00000638794 SYNE4Q8N205 404 aa22.11■■□□□ 1.13
SMN2-216ENST00000638794 IQCA1LA6NCM1 817 aa22.1■■□□□ 1.13
SMN2-216ENST00000638794 PARP10Q53GL7 1025 aa22.09■■□□□ 1.13
SMN2-216ENST00000638794 C3orf67Q6ZVT6 689 aa22.09■■□□□ 1.13
SMN2-216ENST00000638794 PPP1R42Q7Z4L9 355 aa22.09■■□□□ 1.13
SMN2-216ENST00000638794 NECTIN2Q92692 538 aa22.09■■□□□ 1.13
SMN2-216ENST00000638794 PSMD1Q99460 953 aa22.09■■□□□ 1.13
SMN2-216ENST00000638794 WDR43Q15061 677 aaKnown RBP eCLIP22.08■■□□□ 1.13
SMN2-216ENST00000638794 CC2D2BQ6DHV5 1058 aa22.08■■□□□ 1.13
SMN2-216ENST00000638794 RUNDC1Q96C34 613 aa22.08■■□□□ 1.13
SMN2-216ENST00000638794 TAF1DQ9H5J8 278 aaPredicted RBP22.08■■□□□ 1.13
SMN2-216ENST00000638794 TRIM35Q9UPQ4 493 aa22.08■■□□□ 1.13
SMN2-216ENST00000638794 FZD9O00144 591 aa22.07■■□□□ 1.12
SMN2-216ENST00000638794 KRT24Q2M2I5 525 aa22.07■■□□□ 1.12
SMN2-216ENST00000638794 SLC51AQ86UW1 340 aa22.07■■□□□ 1.12
SMN2-216ENST00000638794 RBM17Q96I25 401 aaKnown RBP22.07■■□□□ 1.12
SMN2-216ENST00000638794 CRAMP1Q96RY5 1269 aa22.07■■□□□ 1.12
SMN2-216ENST00000638794 COL4A5P29400 1685 aa22.07■■□□□ 1.12
SMN2-216ENST00000638794 LAMB2P55268 1798 aa22.07■■□□□ 1.12
SMN2-216ENST00000638794 CHL1O00533 1208 aa22.06■■□□□ 1.12
SMN2-216ENST00000638794 COPS6Q7L5N1 327 aa22.06■■□□□ 1.12
SMN2-216ENST00000638794 XAGE3Q8WTP9 111 aa22.06■■□□□ 1.12
SMN2-216ENST00000638794 UTP14AQ9BVJ6 771 aaKnown RBP22.06■■□□□ 1.12
SMN2-216ENST00000638794 PPEF1O14829 653 aaPredicted RBP22.05■■□□□ 1.12
SMN2-216ENST00000638794 AIMP1Q12904 312 aaKnown RBP22.05■■□□□ 1.12
SMN2-216ENST00000638794 LDHDQ86WU2 507 aa22.05■■□□□ 1.12
SMN2-216ENST00000638794 NLRP3Q96P20 1036 aa22.05■■□□□ 1.12
SMN2-216ENST00000638794 ADAMTS8Q9UP79 889 aa22.05■■□□□ 1.12
SMN2-216ENST00000638794 LAS1LQ9Y4W2 734 aaKnown RBP22.05■■□□□ 1.12
SMN2-216ENST00000638794 ADAMTSL1Q8N6G6 1762 aa22.04■■□□□ 1.12
SMN2-216ENST00000638794 TCERG1O14776 1098 aaKnown RBP22.04■■□□□ 1.12
SMN2-216ENST00000638794 JDP2Q8WYK2 163 aa22.04■■□□□ 1.12
SMN2-216ENST00000638794 HACL1Q9UJ83 578 aa22.04■■□□□ 1.12
SMN2-216ENST00000638794 RNF123Q5XPI4 1314 aa22.04■■□□□ 1.12
SMN2-216ENST00000638794 GRIPAP1Q4V328 841 aa22.03■■□□□ 1.12
SMN2-216ENST00000638794 EAPPQ56P03 285 aaPredicted RBP22.03■■□□□ 1.12
SMN2-216ENST00000638794 HSP90AB3PQ58FF7 597 aa22.03■■□□□ 1.12
SMN2-216ENST00000638794 SLC10A5Q5PT55 438 aa22.03■■□□□ 1.12
SMN2-216ENST00000638794 DDX21Q9NR30 783 aaKnown RBP eCLIP22.03■■□□□ 1.12
SMN2-216ENST00000638794 EPHX2P34913 555 aa22.02■■□□□ 1.12
SMN2-216ENST00000638794 NLRP10Q86W26 655 aa22.02■■□□□ 1.12
SMN2-216ENST00000638794 GPC2Q8N158 579 aa22.02■■□□□ 1.12
SMN2-216ENST00000638794 CREBZFQ9NS37 354 aa22.02■■□□□ 1.12
SMN2-216ENST00000638794 CHPF2Q9P2E5 772 aa22.02■■□□□ 1.12
SMN2-216ENST00000638794 PASKQ96RG2 1323 aa22.02■■□□□ 1.12
SMN2-216ENST00000638794 PRKRIP1Q9H875 184 aaPredicted RBP22.01■■□□□ 1.11
SMN2-216ENST00000638794 ABCC4O15439 1325 aa22.01■■□□□ 1.11
SMN2-216ENST00000638794 TCIRG1Q13488 830 aa22■■□□□ 1.11
SMN2-216ENST00000638794 HDGFL1Q5TGJ6 251 aa22■■□□□ 1.11
SMN2-216ENST00000638794 LARGE2Q8N3Y3 721 aa22■■□□□ 1.11
SMN2-216ENST00000638794 LTBP1Q14766 1721 aa22■■□□□ 1.11
SMN2-216ENST00000638794 HCLS1P14317 486 aaPredicted RBP21.99■■□□□ 1.11
SMN2-216ENST00000638794 EIF6P56537 245 aaKnown RBP21.99■■□□□ 1.11
SMN2-216ENST00000638794 ATP6V0A2Q9Y487 856 aa21.99■■□□□ 1.11
SMN2-216ENST00000638794 ITGBL1O95965 494 aaPredicted RBP21.98■■□□□ 1.11
SMN2-216ENST00000638794 HOXB7P09629 217 aa21.98■■□□□ 1.11
SMN2-216ENST00000638794 COL13A1Q5TAT6 717 aaPredicted RBP21.98■■□□□ 1.11
SMN2-216ENST00000638794 MKRN1Q9UHC7 482 aaKnown RBP21.98■■□□□ 1.11
SMN2-216ENST00000638794 TRMT112Q9UI30 125 aaKnown RBP21.98■■□□□ 1.11
SMN2-216ENST00000638794 CLEC11AQ9Y240 323 aa21.98■■□□□ 1.11
SMN2-216ENST00000638794 GJA3Q9Y6H8 435 aa21.98■■□□□ 1.11
SMN2-216ENST00000638794 TAF1P21675 1872 aa21.98■■□□□ 1.11
SMN2-216ENST00000638794 HSPA1AP0DMV8 641 aaKnown RBP21.97■■□□□ 1.11
SMN2-216ENST00000638794 HSPA1BP0DMV9 641 aaKnown RBP21.97■■□□□ 1.11
SMN2-216ENST00000638794 PNMA8AQ86V59 439 aaPredicted RBP21.97■■□□□ 1.11
SMN2-216ENST00000638794 CFAP44Q96MT7 982 aa21.97■■□□□ 1.11
SMN2-216ENST00000638794 DDX60Q8IY21 1712 aaKnown RBP21.97■■□□□ 1.11
SMN2-216ENST00000638794 PPIP5K2O43314 1243 aa21.96■■□□□ 1.11
SMN2-216ENST00000638794 ZNF428Q96B54 188 aa21.96■■□□□ 1.11
SMN2-216ENST00000638794 TMX4Q9H1E5 349 aaPredicted RBP21.96■■□□□ 1.11
SMN2-216ENST00000638794 SH3TC1Q8TE82 1336 aa21.96■■□□□ 1.11
SMN2-216ENST00000638794 MAP1SQ66K74 1059 aaPredicted RBP21.95■■□□□ 1.1
SMN2-216ENST00000638794 NIM1KQ8IY84 436 aa21.95■■□□□ 1.1
SMN2-216ENST00000638794 PLBD2Q8NHP8 589 aa21.95■■□□□ 1.1
SMN2-216ENST00000638794 MBIPQ9NS73 344 aa21.95■■□□□ 1.1
SMN2-216ENST00000638794 DBF4Q9UBU7 674 aaPredicted RBP21.95■■□□□ 1.1
SMN2-216ENST00000638794 BBOX1O75936 387 aa21.94■■□□□ 1.1
SMN2-216ENST00000638794 SCNN1DP51172 638 aa21.94■■□□□ 1.1
SMN2-216ENST00000638794 AOC3Q16853 763 aa21.94■■□□□ 1.1
SMN2-216ENST00000638794 DUSP27Q5VZP5 1158 aa21.94■■□□□ 1.1
SMN2-216ENST00000638794 ANKRD13DQ6ZTN6 518 aa21.94■■□□□ 1.1
SMN2-216ENST00000638794 CNTNAP1P78357 1384 aa21.94■■□□□ 1.1
SMN2-216ENST00000638794 LMOD1P29536 600 aaPredicted RBP21.93■■□□□ 1.1
SMN2-216ENST00000638794 DDX46Q7L014 1031 aaKnown RBP21.93■■□□□ 1.1
SMN2-216ENST00000638794 SP8Q8IXZ3 490 aa21.93■■□□□ 1.1
SMN2-216ENST00000638794 CNTROBQ8N137 903 aa21.93■■□□□ 1.1
SMN2-216ENST00000638794 RTFDC1Q9BY42 306 aaPredicted RBP21.93■■□□□ 1.1
SMN2-216ENST00000638794 TMEM88BA6NKF7 163 aa21.92■■□□□ 1.1
SMN2-216ENST00000638794 APAF1O14727 1248 aa21.92■■□□□ 1.1
SMN2-216ENST00000638794 ZNF853P0CG23 659 aa21.92■■□□□ 1.1
SMN2-216ENST00000638794 ISCA1Q9BUE6 129 aa21.92■■□□□ 1.1
SMN2-216ENST00000638794 VPS33BQ9H267 617 aa21.92■■□□□ 1.1
SMN2-216ENST00000638794 LRRC37AA6NMS7 1700 aa21.92■■□□□ 1.1
SMN2-216ENST00000638794 EPS15P42566 896 aa21.91■■□□□ 1.1
SMN2-216ENST00000638794 GRAPQ13588 217 aa21.91■■□□□ 1.1
SMN2-216ENST00000638794 DPP8Q6V1X1 898 aaPredicted RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms