RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	LAMB4	A4D0S4	1761 aa		12.46	□□□□□ -0.41
CACNA1A-256	ENST00000637981	KDM3B	Q7LBC6	1761 aa		12.46	□□□□□ -0.41
CACNA1A-256	ENST00000637981	RGL2	O15211	777 aa		12.46	□□□□□ -0.41
CACNA1A-256	ENST00000637981	NEFM	P07197	916 aa		12.46	□□□□□ -0.41
CACNA1A-256	ENST00000637981	WDR43	Q15061	677 aa	Known RBP eCLIP	12.46	□□□□□ -0.41
CACNA1A-256	ENST00000637981	GPC2	Q8N158	579 aa		12.46	□□□□□ -0.41
CACNA1A-256	ENST00000637981	JDP2	Q8WYK2	163 aa		12.46	□□□□□ -0.41
CACNA1A-256	ENST00000637981	U2AF1L5	P0DN76	240 aa	Predicted RBP	12.45	□□□□□ -0.42
CACNA1A-256	ENST00000637981	U2AF1	Q01081	240 aa	Known RBP eCLIP	12.45	□□□□□ -0.42
CACNA1A-256	ENST00000637981	HLF	Q16534	295 aa		12.45	□□□□□ -0.42
CACNA1A-256	ENST00000637981	PSMD1	Q99460	953 aa		12.45	□□□□□ -0.42
CACNA1A-256	ENST00000637981	MRS2	Q9HD23	443 aa		12.45	□□□□□ -0.42
CACNA1A-256	ENST00000637981	ABT1	Q9ULW3	272 aa	Known RBP	12.45	□□□□□ -0.42
CACNA1A-256	ENST00000637981	WDR33	Q9C0J8	1336 aa	Known RBP	12.44	□□□□□ -0.42
CACNA1A-256	ENST00000637981	CCER2	I3L3R5	266 aa		12.44	□□□□□ -0.42
CACNA1A-256	ENST00000637981	HSPA8	P11142	646 aa	Known RBP	12.44	□□□□□ -0.42
CACNA1A-256	ENST00000637981	EIF6	P56537	245 aa	Known RBP	12.44	□□□□□ -0.42
CACNA1A-256	ENST00000637981	MAP2K1	Q02750	393 aa	Predicted RBP	12.44	□□□□□ -0.42
CACNA1A-256	ENST00000637981	DCTN1	Q14203	1278 aa		12.44	□□□□□ -0.42
CACNA1A-256	ENST00000637981	GJA3	Q9Y6H8	435 aa		12.44	□□□□□ -0.42
CACNA1A-256	ENST00000637981	LMOD1	P29536	600 aa	Predicted RBP	12.43	□□□□□ -0.42
CACNA1A-256	ENST00000637981	CRY2	Q49AN0	593 aa		12.43	□□□□□ -0.42
CACNA1A-256	ENST00000637981	NUTM1	Q86Y26	1132 aa		12.43	□□□□□ -0.42
CACNA1A-256	ENST00000637981	SNED1	Q8TER0	1413 aa		12.43	□□□□□ -0.42
CACNA1A-256	ENST00000637981	NYX	Q9GZU5	481 aa		12.43	□□□□□ -0.42
CACNA1A-256	ENST00000637981	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.43	□□□□□ -0.42
CACNA1A-256	ENST00000637981	ABCC12	Q96J65	1359 aa		12.43	□□□□□ -0.42
CACNA1A-256	ENST00000637981	CC2D2B	Q6DHV5	1058 aa		12.42	□□□□□ -0.42
CACNA1A-256	ENST00000637981	NGEF	Q8N5V2	710 aa		12.42	□□□□□ -0.42
CACNA1A-256	ENST00000637981	ABHD8	Q96I13	439 aa		12.42	□□□□□ -0.42
CACNA1A-256	ENST00000637981	COL4A5	P29400	1685 aa		12.42	□□□□□ -0.42
CACNA1A-256	ENST00000637981	HTATSF1	O43719	755 aa	Known RBP	12.41	□□□□□ -0.42
CACNA1A-256	ENST00000637981	TAF7	Q15545	349 aa	Predicted RBP	12.41	□□□□□ -0.42
CACNA1A-256	ENST00000637981	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.41	□□□□□ -0.42
CACNA1A-256	ENST00000637981	RPGR	Q92834	1020 aa	Known RBP	12.41	□□□□□ -0.42
CACNA1A-256	ENST00000637981	MIS18A	Q9NYP9	233 aa		12.41	□□□□□ -0.42
CACNA1A-256	ENST00000637981	LTBP1	Q14766	1721 aa		12.41	□□□□□ -0.42
CACNA1A-256	ENST00000637981	ERVV-1	B6SEH8	477 aa		12.4	□□□□□ -0.42
CACNA1A-256	ENST00000637981	EPS15	P42566	896 aa		12.4	□□□□□ -0.42
CACNA1A-256	ENST00000637981	SCNN1D	P51172	638 aa		12.4	□□□□□ -0.42
CACNA1A-256	ENST00000637981	FMR1	Q06787	632 aa	Known RBP eCLIP	12.4	□□□□□ -0.42
CACNA1A-256	ENST00000637981	GRM1	Q13255	1194 aa		12.4	□□□□□ -0.42
CACNA1A-256	ENST00000637981	FAM161A	Q3B820	660 aa		12.4	□□□□□ -0.42
CACNA1A-256	ENST00000637981	LARGE2	Q8N3Y3	721 aa		12.4	□□□□□ -0.42
CACNA1A-256	ENST00000637981	CAPNS2	Q96L46	248 aa		12.4	□□□□□ -0.42
CACNA1A-256	ENST00000637981	BEGAIN	Q9BUH8	593 aa		12.4	□□□□□ -0.42
CACNA1A-256	ENST00000637981	MAP3K15	Q6ZN16	1313 aa		12.4	□□□□□ -0.42
CACNA1A-256	ENST00000637981	HOXA10	P31260	410 aa	Predicted RBP	12.39	□□□□□ -0.43
CACNA1A-256	ENST00000637981	ECE1	P42892	770 aa		12.39	□□□□□ -0.43
CACNA1A-256	ENST00000637981	GRIPAP1	Q4V328	841 aa		12.39	□□□□□ -0.43
CACNA1A-256	ENST00000637981	CYP4F22	Q6NT55	531 aa		12.39	□□□□□ -0.43
CACNA1A-256	ENST00000637981	KIF6	Q6ZMV9	814 aa		12.39	□□□□□ -0.43
CACNA1A-256	ENST00000637981	NUP98	P52948	1817 aa		12.39	□□□□□ -0.43
CACNA1A-256	ENST00000637981	THSD7B	Q9C0I4	1608 aa		12.39	□□□□□ -0.43
CACNA1A-256	ENST00000637981	UBN2	Q6ZU65	1347 aa		12.39	□□□□□ -0.43
CACNA1A-256	ENST00000637981	MAPK8IP3	Q9UPT6	1336 aa		12.39	□□□□□ -0.43
CACNA1A-256	ENST00000637981	TCERG1	O14776	1098 aa	Known RBP	12.38	□□□□□ -0.43
CACNA1A-256	ENST00000637981	PPEF1	O14829	653 aa	Predicted RBP	12.38	□□□□□ -0.43
CACNA1A-256	ENST00000637981	GPT	P24298	496 aa		12.38	□□□□□ -0.43
CACNA1A-256	ENST00000637981	CST9	Q5W186	159 aa		12.38	□□□□□ -0.43
CACNA1A-256	ENST00000637981	TTLL7	Q6ZT98	887 aa		12.38	□□□□□ -0.43
CACNA1A-256	ENST00000637981	USP50	Q70EL3	339 aa	Predicted RBP	12.38	□□□□□ -0.43
CACNA1A-256	ENST00000637981	SLC51A	Q86UW1	340 aa		12.38	□□□□□ -0.43
CACNA1A-256	ENST00000637981	NIM1K	Q8IY84	436 aa		12.38	□□□□□ -0.43
CACNA1A-256	ENST00000637981	MIER1	Q8N108	512 aa		12.38	□□□□□ -0.43
CACNA1A-256	ENST00000637981	RBM17	Q96I25	401 aa	Known RBP	12.38	□□□□□ -0.43
CACNA1A-256	ENST00000637981	GPR101	Q96P66	508 aa	Predicted RBP	12.38	□□□□□ -0.43
CACNA1A-256	ENST00000637981	RRP7A	Q9Y3A4	280 aa	Known RBP	12.38	□□□□□ -0.43
CACNA1A-256	ENST00000637981	RIC1	Q4ADV7	1423 aa		12.38	□□□□□ -0.43
CACNA1A-256	ENST00000637981	IBTK	Q9P2D0	1353 aa	Predicted RBP	12.38	□□□□□ -0.43
CACNA1A-256	ENST00000637981	TRAF5	O00463	557 aa		12.37	□□□□□ -0.43
CACNA1A-256	ENST00000637981	MYL6B	P14649	208 aa		12.37	□□□□□ -0.43
CACNA1A-256	ENST00000637981	SUSD4	Q5VX71	490 aa		12.37	□□□□□ -0.43
CACNA1A-256	ENST00000637981	PNISR	Q8TF01	805 aa	Known RBP	12.37	□□□□□ -0.43
CACNA1A-256	ENST00000637981	CRAMP1	Q96RY5	1269 aa		12.37	□□□□□ -0.43
CACNA1A-256	ENST00000637981	ZBTB3	Q9H5J0	574 aa		12.37	□□□□□ -0.43
CACNA1A-256	ENST00000637981	CCDC85C	A6NKD9	419 aa		12.37	□□□□□ -0.43
CACNA1A-256	ENST00000637981	PPIP5K2	O43314	1243 aa		12.37	□□□□□ -0.43
CACNA1A-256	ENST00000637981	PLEKHF1	Q96S99	279 aa		12.37	□□□□□ -0.43
CACNA1A-256	ENST00000637981	TMX4	Q9H1E5	349 aa	Predicted RBP	12.37	□□□□□ -0.43
CACNA1A-256	ENST00000637981	ADAMTS8	Q9UP79	889 aa		12.37	□□□□□ -0.43
CACNA1A-256	ENST00000637981	TLL2	Q9Y6L7	1015 aa		12.37	□□□□□ -0.43
CACNA1A-256	ENST00000637981	TRPM7	Q96QT4	1865 aa		12.36	□□□□□ -0.43
CACNA1A-256	ENST00000637981	SLC34A2	O95436	690 aa		12.36	□□□□□ -0.43
CACNA1A-256	ENST00000637981	NTSR2	O95665	410 aa		12.36	□□□□□ -0.43
CACNA1A-256	ENST00000637981	KCNA4	P22459	653 aa		12.36	□□□□□ -0.43
CACNA1A-256	ENST00000637981	EIF4A1	P60842	406 aa	Known RBP	12.36	□□□□□ -0.43
CACNA1A-256	ENST00000637981	AOC3	Q16853	763 aa		12.36	□□□□□ -0.43
CACNA1A-256	ENST00000637981	CCDC184	Q52MB2	194 aa		12.36	□□□□□ -0.43
CACNA1A-256	ENST00000637981	C3orf67	Q6ZVT6	689 aa		12.36	□□□□□ -0.43
CACNA1A-256	ENST00000637981	PPP1R42	Q7Z4L9	355 aa		12.36	□□□□□ -0.43
CACNA1A-256	ENST00000637981	ZNF34	Q8IZ26	560 aa		12.36	□□□□□ -0.43
CACNA1A-256	ENST00000637981	RUNDC1	Q96C34	613 aa		12.36	□□□□□ -0.43
CACNA1A-256	ENST00000637981	ADARB2	Q9NS39	739 aa	Known RBP	12.36	□□□□□ -0.43
CACNA1A-256	ENST00000637981	GPRC5D	Q9NZD1	345 aa		12.36	□□□□□ -0.43
CACNA1A-256	ENST00000637981	TSKS	Q9UJT2	592 aa		12.36	□□□□□ -0.43
CACNA1A-256	ENST00000637981	AOC2	O75106	756 aa		12.35	□□□□□ -0.43
CACNA1A-256	ENST00000637981	MAP2K2	P36507	400 aa		12.35	□□□□□ -0.43
CACNA1A-256	ENST00000637981	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.35	□□□□□ -0.43
CACNA1A-256	ENST00000637981	NLRP3	Q96P20	1036 aa		12.35	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms