RNA–Protein interactions for RNA: ENST00000637103.1

SMARCA2-258, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 5,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-258ENST00000637103 SPG7Q9UQ90 795 aa12.95□□□□□ -0.34
SMARCA2-258ENST00000637103 A6NNZ2 444 aa12.95□□□□□ -0.34
SMARCA2-258ENST00000637103 TACC1O75410 805 aa12.95□□□□□ -0.34
SMARCA2-258ENST00000637103 TUBB8Q3ZCM7 444 aa12.95□□□□□ -0.34
SMARCA2-258ENST00000637103 ZNF213O14771 459 aa12.94□□□□□ -0.34
SMARCA2-258ENST00000637103 CCT2P78371 535 aaKnown RBP12.94□□□□□ -0.34
SMARCA2-258ENST00000637103 KRT83P78385 493 aa12.94□□□□□ -0.34
SMARCA2-258ENST00000637103 SYT10Q6XYQ8 523 aa12.94□□□□□ -0.34
SMARCA2-258ENST00000637103 TUBB2AQ13885 445 aa12.94□□□□□ -0.34
SMARCA2-258ENST00000637103 DAAM2Q86T65 1068 aa12.94□□□□□ -0.34
SMARCA2-258ENST00000637103 INTS4Q96HW7 963 aaKnown RBP12.94□□□□□ -0.34
SMARCA2-258ENST00000637103 TUBB2BQ9BVA1 445 aa12.94□□□□□ -0.34
SMARCA2-258ENST00000637103 SYNJ1O43426 1573 aa12.94□□□□□ -0.34
SMARCA2-258ENST00000637103 RAD54L2Q9Y4B4 1467 aa12.94□□□□□ -0.34
SMARCA2-258ENST00000637103 CTNNBL1Q8WYA6 563 aaPredicted RBP12.94□□□□□ -0.34
SMARCA2-258ENST00000637103 GTF3C6Q969F1 213 aa12.94□□□□□ -0.34
SMARCA2-258ENST00000637103 SELENOOQ9BVL4 669 aa12.94□□□□□ -0.34
SMARCA2-258ENST00000637103 IDH1O75874 414 aaKnown RBP12.94□□□□□ -0.34
SMARCA2-258ENST00000637103 MYL6BP14649 208 aa12.94□□□□□ -0.34
SMARCA2-258ENST00000637103 TRHP20396 242 aaPredicted RBP12.94□□□□□ -0.34
SMARCA2-258ENST00000637103 MPHOSPH8Q99549 860 aa12.94□□□□□ -0.34
SMARCA2-258ENST00000637103 RASAL2Q9UJF2 1139 aa12.94□□□□□ -0.34
SMARCA2-258ENST00000637103 NSD2O96028 1365 aa12.94□□□□□ -0.34
SMARCA2-258ENST00000637103 IFIT1P09914 478 aaKnown RBP12.93□□□□□ -0.34
SMARCA2-258ENST00000637103 SDSP20132 328 aa12.93□□□□□ -0.34
SMARCA2-258ENST00000637103 KIAA0753Q2KHM9 967 aa12.93□□□□□ -0.34
SMARCA2-258ENST00000637103 WDR66Q8TBY9 1149 aa12.93□□□□□ -0.34
SMARCA2-258ENST00000637103 SCLT1Q96NL6 688 aa12.93□□□□□ -0.34
SMARCA2-258ENST00000637103 LARP6Q9BRS8 491 aaKnown RBP12.93□□□□□ -0.34
SMARCA2-258ENST00000637103 SEC63Q9UGP8 760 aaKnown RBP12.93□□□□□ -0.34
SMARCA2-258ENST00000637103 A0A087WZG4 1122 aa12.93□□□□□ -0.34
SMARCA2-258ENST00000637103 AKR1B10O60218 316 aa12.93□□□□□ -0.34
SMARCA2-258ENST00000637103 NOP2P46087 812 aaKnown RBP12.93□□□□□ -0.34
SMARCA2-258ENST00000637103 CCDC50Q8IVM0 306 aa12.93□□□□□ -0.34
SMARCA2-258ENST00000637103 ORC3Q9UBD5 711 aaPredicted RBP12.93□□□□□ -0.34
SMARCA2-258ENST00000637103 CEP83Q9Y592 693 aa12.93□□□□□ -0.34
SMARCA2-258ENST00000637103 USP16Q9Y5T5 823 aa12.93□□□□□ -0.34
SMARCA2-258ENST00000637103 CCDC96Q2M329 555 aa12.93□□□□□ -0.34
SMARCA2-258ENST00000637103 PLCD3Q8N3E9 789 aa12.93□□□□□ -0.34
SMARCA2-258ENST00000637103 RNF41Q9H4P4 317 aaPredicted RBP12.93□□□□□ -0.34
SMARCA2-258ENST00000637103 CABP4P57796 275 aa12.93□□□□□ -0.34
SMARCA2-258ENST00000637103 AFAP1L1Q8TED9 768 aa12.93□□□□□ -0.34
SMARCA2-258ENST00000637103 ESYT1Q9BSJ8 1104 aa12.93□□□□□ -0.34
SMARCA2-258ENST00000637103 RIOK3O14730 519 aaKnown RBP12.92□□□□□ -0.34
SMARCA2-258ENST00000637103 IARSP41252 1262 aaKnown RBP12.92□□□□□ -0.34
SMARCA2-258ENST00000637103 ZNF445P59923 1031 aa12.92□□□□□ -0.34
SMARCA2-258ENST00000637103 CCDC40Q4G0X9 1142 aa12.92□□□□□ -0.34
SMARCA2-258ENST00000637103 LRRC27Q9C0I9 530 aa12.92□□□□□ -0.34
SMARCA2-258ENST00000637103 KRT86O43790 486 aa12.92□□□□□ -0.34
SMARCA2-258ENST00000637103 BMP15O95972 392 aa12.92□□□□□ -0.34
SMARCA2-258ENST00000637103 ZNF76P36508 570 aa12.92□□□□□ -0.34
SMARCA2-258ENST00000637103 NAPBQ9H115 298 aa12.92□□□□□ -0.34
SMARCA2-258ENST00000637103 ZNF287Q9HBT7 754 aa12.92□□□□□ -0.34
SMARCA2-258ENST00000637103 RNF216Q9NWF9 866 aaPredicted RBP12.92□□□□□ -0.34
SMARCA2-258ENST00000637103 SYNJ2O15056 1496 aa12.92□□□□□ -0.34
SMARCA2-258ENST00000637103 ATP2B2Q01814 1243 aa12.92□□□□□ -0.34
SMARCA2-258ENST00000637103 RBSNQ9H1K0 784 aa12.92□□□□□ -0.34
SMARCA2-258ENST00000637103 LRP2BPQ9P2M1 347 aa12.92□□□□□ -0.34
SMARCA2-258ENST00000637103 TRIM21P19474 475 aaKnown RBP12.92□□□□□ -0.34
SMARCA2-258ENST00000637103 SARNPP82979 210 aaKnown RBP12.91□□□□□ -0.34
SMARCA2-258ENST00000637103 DNM1Q05193 864 aaKnown RBP12.91□□□□□ -0.34
SMARCA2-258ENST00000637103 NAA25Q14CX7 972 aa12.91□□□□□ -0.34
SMARCA2-258ENST00000637103 ISM2Q6H9L7 571 aa12.91□□□□□ -0.34
SMARCA2-258ENST00000637103 TROQ12816 1431 aaPredicted RBP12.91□□□□□ -0.34
SMARCA2-258ENST00000637103 CCDC194A0A1B0GVG4 234 aa12.91□□□□□ -0.34
SMARCA2-258ENST00000637103 A0A1W2PRG0 241 aa12.91□□□□□ -0.34
SMARCA2-258ENST00000637103 U2AF2P26368 475 aaKnown RBP eCLIP12.91□□□□□ -0.344e-6■□□□□ 8.3
SMARCA2-258ENST00000637103 EVCP57679 992 aa12.91□□□□□ -0.34
SMARCA2-258ENST00000637103 PRPF4BQ13523 1007 aaKnown RBP12.91□□□□□ -0.34
SMARCA2-258ENST00000637103 CALML4Q96GE6 196 aa12.91□□□□□ -0.34
SMARCA2-258ENST00000637103 PCDHB15Q9Y5E8 787 aa12.91□□□□□ -0.34
SMARCA2-258ENST00000637103 RTL1A6NKG5 1358 aa12.91□□□□□ -0.34
SMARCA2-258ENST00000637103 PAF1Q8N7H5 531 aa12.91□□□□□ -0.34
SMARCA2-258ENST00000637103 POLR3DP05423 398 aaPredicted RBP12.91□□□□□ -0.34
SMARCA2-258ENST00000637103 CETN1Q12798 172 aa12.91□□□□□ -0.34
SMARCA2-258ENST00000637103 TRIM47Q96LD4 638 aa12.91□□□□□ -0.34
SMARCA2-258ENST00000637103 CCDC77Q9BR77 488 aa12.91□□□□□ -0.34
SMARCA2-258ENST00000637103 THUMPD2Q9BTF0 503 aaKnown RBP12.91□□□□□ -0.34
SMARCA2-258ENST00000637103 RBM28Q9NW13 759 aaKnown RBP12.91□□□□□ -0.34
SMARCA2-258ENST00000637103 NPHP3Q7Z494 1330 aa12.9□□□□□ -0.34
SMARCA2-258ENST00000637103 CCDC172P0C7W6 258 aa12.9□□□□□ -0.34
SMARCA2-258ENST00000637103 PRPHP41219 470 aa12.9□□□□□ -0.34
SMARCA2-258ENST00000637103 CPLX4Q7Z7G2 160 aa12.9□□□□□ -0.34
SMARCA2-258ENST00000637103 NLRP5P59047 1200 aa12.9□□□□□ -0.34
SMARCA2-258ENST00000637103 LACTBP83111 547 aaPredicted RBP12.9□□□□□ -0.34
SMARCA2-258ENST00000637103 PPP2R3AQ06190 1150 aa12.9□□□□□ -0.34
SMARCA2-258ENST00000637103 PLVAPQ9BX97 442 aa12.9□□□□□ -0.34
SMARCA2-258ENST00000637103 TCP11L1Q9NUJ3 509 aa12.9□□□□□ -0.34
SMARCA2-258ENST00000637103 RALGAPBQ86X10 1494 aa12.9□□□□□ -0.34
SMARCA2-258ENST00000637103 ANKRD24Q8TF21 1146 aa12.9□□□□□ -0.34
SMARCA2-258ENST00000637103 SAMD15Q9P1V8 674 aa12.9□□□□□ -0.34
SMARCA2-258ENST00000637103 RPRD2Q5VT52 1461 aaKnown RBP12.9□□□□□ -0.34
SMARCA2-258ENST00000637103 IFIT3O14879 490 aaKnown RBP12.9□□□□□ -0.35
SMARCA2-258ENST00000637103 VAV2P52735 878 aa12.9□□□□□ -0.35
SMARCA2-258ENST00000637103 DDX46Q7L014 1031 aaKnown RBP12.9□□□□□ -0.35
SMARCA2-258ENST00000637103 CCDC8Q9H0W5 538 aaPredicted RBP12.9□□□□□ -0.35
SMARCA2-258ENST00000637103 HOMER2Q9NSB8 354 aa12.9□□□□□ -0.35
SMARCA2-258ENST00000637103 MKRN1Q9UHC7 482 aaKnown RBP12.9□□□□□ -0.35
SMARCA2-258ENST00000637103 MEX3CQ5U5Q3 659 aaKnown RBP12.89□□□□□ -0.35
SMARCA2-258ENST00000637103 NEBLO76041 1014 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms