RNA–Protein interactions for RNA: ENST00000630499.2

SRRM2-231, Transcript of serine/arginine repetitive matrix 2, human

TSL 1 (best) BASIC

Gene SRRM2, Length 1,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-231	ENST00000630499	BABAM1	Q9NWV8	329 aa		29.35	■■■□□ 2.29
SRRM2-231	ENST00000630499	C3orf67	Q6ZVT6	689 aa		29.34	■■■□□ 2.29
SRRM2-231	ENST00000630499	SLC51A	Q86UW1	340 aa		29.34	■■■□□ 2.29
SRRM2-231	ENST00000630499	CREBZF	Q9NS37	354 aa		29.34	■■■□□ 2.29
SRRM2-231	ENST00000630499	TSPYL4	Q9UJ04	414 aa		29.34	■■■□□ 2.29
SRRM2-231	ENST00000630499	RIPK4	P57078	832 aa		29.33	■■■□□ 2.29
SRRM2-231	ENST00000630499	LDHD	Q86WU2	507 aa		29.33	■■■□□ 2.29
SRRM2-231	ENST00000630499	LAMB2	P55268	1798 aa		29.33	■■■□□ 2.29
SRRM2-231	ENST00000630499	LTBP1	Q14766	1721 aa		29.32	■■■□□ 2.28
SRRM2-231	ENST00000630499	TMPO	P42166	694 aa	Known RBP	29.32	■■■□□ 2.28
SRRM2-231	ENST00000630499	PROSER3	Q2NL68	480 aa		29.32	■■■□□ 2.28
SRRM2-231	ENST00000630499	CC2D2B	Q6DHV5	1058 aa		29.31	■■■□□ 2.28
SRRM2-231	ENST00000630499	ITGBL1	O95965	494 aa	Predicted RBP	29.3	■■■□□ 2.28
SRRM2-231	ENST00000630499	CRAMP1	Q96RY5	1269 aa		29.3	■■■□□ 2.28
SRRM2-231	ENST00000630499	HSPA1A	P0DMV8	641 aa	Known RBP	29.28	■■■□□ 2.28
SRRM2-231	ENST00000630499	HSPA1B	P0DMV9	641 aa	Known RBP	29.28	■■■□□ 2.28
SRRM2-231	ENST00000630499	SLC10A5	Q5PT55	438 aa		29.28	■■■□□ 2.28
SRRM2-231	ENST00000630499	HACL1	Q9UJ83	578 aa		29.28	■■■□□ 2.28
SRRM2-231	ENST00000630499	ANXA1	P04083	346 aa		29.27	■■■□□ 2.28
SRRM2-231	ENST00000630499	PARP10	Q53GL7	1025 aa		29.27	■■■□□ 2.28
SRRM2-231	ENST00000630499	GPC2	Q8N158	579 aa		29.27	■■■□□ 2.28
SRRM2-231	ENST00000630499	RPGR	Q92834	1020 aa	Known RBP	29.27	■■■□□ 2.28
SRRM2-231	ENST00000630499	RNF123	Q5XPI4	1314 aa		29.25	■■■□□ 2.27
SRRM2-231	ENST00000630499	EIF2S2	P20042	333 aa	Known RBP	29.25	■■■□□ 2.27
SRRM2-231	ENST00000630499	EPHX2	P34913	555 aa		29.25	■■■□□ 2.27
SRRM2-231	ENST00000630499	GRIPAP1	Q4V328	841 aa		29.25	■■■□□ 2.27
SRRM2-231	ENST00000630499	CNTNAP1	P78357	1384 aa		29.25	■■■□□ 2.27
SRRM2-231	ENST00000630499	PPP1R42	Q7Z4L9	355 aa		29.24	■■■□□ 2.27
SRRM2-231	ENST00000630499	RBM17	Q96I25	401 aa	Known RBP	29.24	■■■□□ 2.27
SRRM2-231	ENST00000630499	MYBBP1A	Q9BQG0	1328 aa	Known RBP	29.23	■■■□□ 2.27
SRRM2-231	ENST00000630499	CHL1	O00533	1208 aa		29.23	■■■□□ 2.27
SRRM2-231	ENST00000630499	PPEF1	O14829	653 aa	Predicted RBP	29.23	■■■□□ 2.27
SRRM2-231	ENST00000630499	LMOD3	Q0VAK6	560 aa		29.23	■■■□□ 2.27
SRRM2-231	ENST00000630499	TRIM35	Q9UPQ4	493 aa		29.23	■■■□□ 2.27
SRRM2-231	ENST00000630499	MKRN1	Q9UHC7	482 aa	Known RBP	29.22	■■■□□ 2.27
SRRM2-231	ENST00000630499	KRT24	Q2M2I5	525 aa		29.21	■■■□□ 2.27
SRRM2-231	ENST00000630499	JDP2	Q8WYK2	163 aa		29.21	■■■□□ 2.27
SRRM2-231	ENST00000630499	UTP14A	Q9BVJ6	771 aa	Known RBP	29.21	■■■□□ 2.27
SRRM2-231	ENST00000630499	EAPP	Q56P03	285 aa	Predicted RBP	29.2	■■■□□ 2.26
SRRM2-231	ENST00000630499	COPS6	Q7L5N1	327 aa		29.2	■■■□□ 2.26
SRRM2-231	ENST00000630499	PNMA8A	Q86V59	439 aa	Predicted RBP	29.2	■■■□□ 2.26
SRRM2-231	ENST00000630499	NLRP10	Q86W26	655 aa		29.19	■■■□□ 2.26
SRRM2-231	ENST00000630499	CCDC146	Q8IYE0	955 aa		29.19	■■■□□ 2.26
SRRM2-231	ENST00000630499	NLRP3	Q96P20	1036 aa		29.19	■■■□□ 2.26
SRRM2-231	ENST00000630499	ATP6V0A2	Q9Y487	856 aa		29.19	■■■□□ 2.26
SRRM2-231	ENST00000630499	DDX60	Q8IY21	1712 aa	Known RBP	29.19	■■■□□ 2.26
SRRM2-231	ENST00000630499	TAF1	P21675	1872 aa		29.19	■■■□□ 2.26
SRRM2-231	ENST00000630499	ABCC4	O15439	1325 aa		29.19	■■■□□ 2.26
SRRM2-231	ENST00000630499	SCNN1D	P51172	638 aa		29.18	■■■□□ 2.26
SRRM2-231	ENST00000630499	DDX10	Q13206	875 aa	Known RBP	29.18	■■■□□ 2.26
SRRM2-231	ENST00000630499	XAGE3	Q8WTP9	111 aa		29.18	■■■□□ 2.26
SRRM2-231	ENST00000630499	DDX21	Q9NR30	783 aa	Known RBP eCLIP	29.18	■■■□□ 2.26
SRRM2-231	ENST00000630499	LRRC37A	A6NMS7	1700 aa		29.17	■■■□□ 2.26
SRRM2-231	ENST00000630499	TMEM88B	A6NKF7	163 aa		29.16	■■■□□ 2.26
SRRM2-231	ENST00000630499	LARGE2	Q8N3Y3	721 aa		29.16	■■■□□ 2.26
SRRM2-231	ENST00000630499	NECTIN2	Q92692	538 aa		29.16	■■■□□ 2.26
SRRM2-231	ENST00000630499	RUNDC1	Q96C34	613 aa		29.16	■■■□□ 2.26
SRRM2-231	ENST00000630499	RTFDC1	Q9BY42	306 aa	Predicted RBP	29.16	■■■□□ 2.26
SRRM2-231	ENST00000630499	EIF6	P56537	245 aa	Known RBP	29.15	■■■□□ 2.26
SRRM2-231	ENST00000630499	TCIRG1	Q13488	830 aa		29.15	■■■□□ 2.26
SRRM2-231	ENST00000630499	HSP90AB3P	Q58FF7	597 aa		29.15	■■■□□ 2.26
SRRM2-231	ENST00000630499	MAP1S	Q66K74	1059 aa	Predicted RBP	29.15	■■■□□ 2.26
SRRM2-231	ENST00000630499	CNTROB	Q8N137	903 aa		29.15	■■■□□ 2.26
SRRM2-231	ENST00000630499	DUOX1	Q9NRD9	1551 aa		29.14	■■■□□ 2.26
SRRM2-231	ENST00000630499	TCERG1	O14776	1098 aa	Known RBP	29.14	■■■□□ 2.26
SRRM2-231	ENST00000630499	TNS4	Q8IZW8	715 aa		29.14	■■■□□ 2.26
SRRM2-231	ENST00000630499	VPS33B	Q9H267	617 aa		29.14	■■■□□ 2.26
SRRM2-231	ENST00000630499	AIMP1	Q12904	312 aa	Known RBP	29.13	■■■□□ 2.25
SRRM2-231	ENST00000630499	NEUROD2	Q15784	382 aa		29.13	■■■□□ 2.25
SRRM2-231	ENST00000630499	CLEC11A	Q9Y240	323 aa		29.13	■■■□□ 2.25
SRRM2-231	ENST00000630499	GJA3	Q9Y6H8	435 aa		29.13	■■■□□ 2.25
SRRM2-231	ENST00000630499	HCLS1	P14317	486 aa	Predicted RBP	29.12	■■■□□ 2.25
SRRM2-231	ENST00000630499	EPS15	P42566	896 aa		29.12	■■■□□ 2.25
SRRM2-231	ENST00000630499	VEGFB	P49765	207 aa		29.12	■■■□□ 2.25
SRRM2-231	ENST00000630499	CHPF2	Q9P2E5	772 aa		29.12	■■■□□ 2.25
SRRM2-231	ENST00000630499	ADAMTS8	Q9UP79	889 aa		29.12	■■■□□ 2.25
SRRM2-231	ENST00000630499	HOXB7	P09629	217 aa		29.11	■■■□□ 2.25
SRRM2-231	ENST00000630499	AOC3	Q16853	763 aa		29.11	■■■□□ 2.25
SRRM2-231	ENST00000630499	COL4A1	P02462	1669 aa		29.11	■■■□□ 2.25
SRRM2-231	ENST00000630499	RASSF10	A6NK89	507 aa		29.1	■■■□□ 2.25
SRRM2-231	ENST00000630499	PPIP5K2	O43314	1243 aa		29.1	■■■□□ 2.25
SRRM2-231	ENST00000630499	BBOX1	O75936	387 aa		29.1	■■■□□ 2.25
SRRM2-231	ENST00000630499	SP8	Q8IXZ3	490 aa		29.1	■■■□□ 2.25
SRRM2-231	ENST00000630499	THSD7B	Q9C0I4	1608 aa		29.09	■■■□□ 2.25
SRRM2-231	ENST00000630499	TRPM7	Q96QT4	1865 aa		29.09	■■■□□ 2.25
SRRM2-231	ENST00000630499	NIM1K	Q8IY84	436 aa		29.09	■■■□□ 2.25
SRRM2-231	ENST00000630499	SH3TC1	Q8TE82	1336 aa		29.09	■■■□□ 2.25
SRRM2-231	ENST00000630499	TRMT112	Q9UI30	125 aa	Known RBP	29.08	■■■□□ 2.25
SRRM2-231	ENST00000630499	FOXN1	O15353	648 aa		29.07	■■■□□ 2.24
SRRM2-231	ENST00000630499	PLBD2	Q8NHP8	589 aa		29.07	■■■□□ 2.24
SRRM2-231	ENST00000630499	ISCA1	Q9BUE6	129 aa		29.07	■■■□□ 2.24
SRRM2-231	ENST00000630499	LMOD1	P29536	600 aa	Predicted RBP	29.06	■■■□□ 2.24
SRRM2-231	ENST00000630499	CXCL9	Q07325	125 aa		29.06	■■■□□ 2.24
SRRM2-231	ENST00000630499	GRAP	Q13588	217 aa		29.06	■■■□□ 2.24
SRRM2-231	ENST00000630499	HDGFL1	Q5TGJ6	251 aa		29.06	■■■□□ 2.24
SRRM2-231	ENST00000630499	USP50	Q70EL3	339 aa	Predicted RBP	29.06	■■■□□ 2.24
SRRM2-231	ENST00000630499	GRAPL	Q8TC17	118 aa	Predicted RBP	29.06	■■■□□ 2.24
SRRM2-231	ENST00000630499	CFAP44	Q96MT7	982 aa		29.06	■■■□□ 2.24
SRRM2-231	ENST00000630499	ZNRF3	Q9ULT6	936 aa		29.06	■■■□□ 2.24
SRRM2-231	ENST00000630499	ZNF853	P0CG23	659 aa		29.05	■■■□□ 2.24

Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms