RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 THUMPD2Q9BTF0 503 aaKnown RBP21.77■■□□□ 1.08
TRIM29-221ENST00000627238 RRP7AQ9Y3A4 280 aaKnown RBP21.77■■□□□ 1.08
TRIM29-221ENST00000627238 COL4A5P29400 1685 aa21.76■■□□□ 1.07
TRIM29-221ENST00000627238 NTSR2O95665 410 aa21.76■■□□□ 1.07
TRIM29-221ENST00000627238 EPHX2P34913 555 aa21.76■■□□□ 1.07
TRIM29-221ENST00000627238 SUSD4Q5VX71 490 aa21.76■■□□□ 1.07
TRIM29-221ENST00000627238 NGEFQ8N5V2 710 aa21.76■■□□□ 1.07
TRIM29-221ENST00000627238 CRAMP1Q96RY5 1269 aa21.76■■□□□ 1.07
TRIM29-221ENST00000627238 MAPK8IP3Q9UPT6 1336 aa21.76■■□□□ 1.07
TRIM29-221ENST00000627238 MYL6BP14649 208 aa21.75■■□□□ 1.07
TRIM29-221ENST00000627238 PARP10Q53GL7 1025 aa21.75■■□□□ 1.07
TRIM29-221ENST00000627238 MKRN1Q9UHC7 482 aaKnown RBP21.75■■□□□ 1.07
TRIM29-221ENST00000627238 TMEM88BA6NKF7 163 aa21.74■■□□□ 1.07
TRIM29-221ENST00000627238 PDIA6Q15084 440 aa21.74■■□□□ 1.07
TRIM29-221ENST00000627238 JDP2Q8WYK2 163 aa21.74■■□□□ 1.07
TRIM29-221ENST00000627238 RPGRQ92834 1020 aaKnown RBP21.74■■□□□ 1.07
TRIM29-221ENST00000627238 ZBTB3Q9H5J0 574 aa21.74■■□□□ 1.07
TRIM29-221ENST00000627238 RNF123Q5XPI4 1314 aa21.74■■□□□ 1.07
TRIM29-221ENST00000627238 GPTP24298 496 aa21.73■■□□□ 1.07
TRIM29-221ENST00000627238 PPP1R42Q7Z4L9 355 aa21.73■■□□□ 1.07
TRIM29-221ENST00000627238 RBM17Q96I25 401 aaKnown RBP21.73■■□□□ 1.07
TRIM29-221ENST00000627238 SLC10A5Q5PT55 438 aa21.72■■□□□ 1.07
TRIM29-221ENST00000627238 VPS33BQ9H267 617 aa21.72■■□□□ 1.07
TRIM29-221ENST00000627238 TSPYL4Q9UJ04 414 aa21.72■■□□□ 1.07
TRIM29-221ENST00000627238 LTBP1Q14766 1721 aa21.72■■□□□ 1.07
TRIM29-221ENST00000627238 ANKRD36CQ5JPF3 1778 aa21.71■■□□□ 1.07
TRIM29-221ENST00000627238 EAPPQ56P03 285 aaPredicted RBP21.71■■□□□ 1.07
TRIM29-221ENST00000627238 EIF6P56537 245 aaKnown RBP21.7■■□□□ 1.06
TRIM29-221ENST00000627238 RASSF10A6NK89 507 aa21.69■■□□□ 1.06
TRIM29-221ENST00000627238 PPEF1O14829 653 aaPredicted RBP21.69■■□□□ 1.06
TRIM29-221ENST00000627238 RALBP1Q15311 655 aa21.69■■□□□ 1.06
TRIM29-221ENST00000627238 CNTROBQ8N137 903 aa21.69■■□□□ 1.06
TRIM29-221ENST00000627238 NLRP3Q96P20 1036 aa21.69■■□□□ 1.06
TRIM29-221ENST00000627238 RIPK4P57078 832 aa21.68■■□□□ 1.06
TRIM29-221ENST00000627238 LMOD3Q0VAK6 560 aa21.68■■□□□ 1.06
TRIM29-221ENST00000627238 C3orf67Q6ZVT6 689 aa21.68■■□□□ 1.06
TRIM29-221ENST00000627238 LAMB2P55268 1798 aa21.67■■□□□ 1.06
TRIM29-221ENST00000627238 VEGFBP49765 207 aa21.67■■□□□ 1.06
TRIM29-221ENST00000627238 SCNN1DP51172 638 aa21.67■■□□□ 1.06
TRIM29-221ENST00000627238 LARGE2Q8N3Y3 721 aa21.67■■□□□ 1.06
TRIM29-221ENST00000627238 UTP14AQ9BVJ6 771 aaKnown RBP21.67■■□□□ 1.06
TRIM29-221ENST00000627238 PRDM10Q9NQV6 1147 aa21.67■■□□□ 1.06
TRIM29-221ENST00000627238 CLEC11AQ9Y240 323 aa21.67■■□□□ 1.06
TRIM29-221ENST00000627238 ATP6V0A2Q9Y487 856 aa21.67■■□□□ 1.06
TRIM29-221ENST00000627238 TMPOP42166 694 aaKnown RBP21.66■■□□□ 1.06
TRIM29-221ENST00000627238 HSP90AB3PQ58FF7 597 aa21.66■■□□□ 1.06
TRIM29-221ENST00000627238 MAP1SQ66K74 1059 aaPredicted RBP21.66■■□□□ 1.06
TRIM29-221ENST00000627238 RTFDC1Q9BY42 306 aaPredicted RBP21.66■■□□□ 1.06
TRIM29-221ENST00000627238 FOXN1O15353 648 aa21.65■■□□□ 1.06
TRIM29-221ENST00000627238 LMOD1P29536 600 aaPredicted RBP21.65■■□□□ 1.06
TRIM29-221ENST00000627238 PROSER3Q2NL68 480 aa21.65■■□□□ 1.06
TRIM29-221ENST00000627238 THSD7BQ9C0I4 1608 aa21.65■■□□□ 1.06
TRIM29-221ENST00000627238 ABCC4O15439 1325 aa21.64■■□□□ 1.05
TRIM29-221ENST00000627238 USP50Q70EL3 339 aaPredicted RBP21.64■■□□□ 1.05
TRIM29-221ENST00000627238 WBP1LQ9NX94 342 aa21.64■■□□□ 1.05
TRIM29-221ENST00000627238 GJA3Q9Y6H8 435 aa21.64■■□□□ 1.05
TRIM29-221ENST00000627238 BBOX1O75936 387 aa21.63■■□□□ 1.05
TRIM29-221ENST00000627238 EIF2S2P20042 333 aaKnown RBP21.63■■□□□ 1.05
TRIM29-221ENST00000627238 SLC51AQ86UW1 340 aa21.63■■□□□ 1.05
TRIM29-221ENST00000627238 NIM1KQ8IY84 436 aa21.63■■□□□ 1.05
TRIM29-221ENST00000627238 SUPT20HQ8NEM7 779 aa21.63■■□□□ 1.05
TRIM29-221ENST00000627238 DDX21Q9NR30 783 aaKnown RBP eCLIP21.63■■□□□ 1.05
TRIM29-221ENST00000627238 CTCFP49711 727 aaPredicted RBP21.62■■□□□ 1.05
TRIM29-221ENST00000627238 DEFB115Q30KQ5 88 aa21.62■■□□□ 1.05
TRIM29-221ENST00000627238 NLRP10Q86W26 655 aa21.62■■□□□ 1.05
TRIM29-221ENST00000627238 TMX4Q9H1E5 349 aaPredicted RBP21.62■■□□□ 1.05
TRIM29-221ENST00000627238 TRPM7Q96QT4 1865 aa21.62■■□□□ 1.05
TRIM29-221ENST00000627238 LRRC37AA6NMS7 1700 aa21.61■■□□□ 1.05
TRIM29-221ENST00000627238 CHL1O00533 1208 aa21.61■■□□□ 1.05
TRIM29-221ENST00000627238 PPIP5K2O43314 1243 aa21.61■■□□□ 1.05
TRIM29-221ENST00000627238 EPS15P42566 896 aa21.61■■□□□ 1.05
TRIM29-221ENST00000627238 COPS6Q7L5N1 327 aa21.61■■□□□ 1.05
TRIM29-221ENST00000627238 SP8Q8IXZ3 490 aa21.61■■□□□ 1.05
TRIM29-221ENST00000627238 CDHR2Q9BYE9 1310 aa21.6■■□□□ 1.05
TRIM29-221ENST00000627238 CAPN15O75808 1086 aa21.6■■□□□ 1.05
TRIM29-221ENST00000627238 ANXA1P04083 346 aa21.6■■□□□ 1.05
TRIM29-221ENST00000627238 TCIRG1Q13488 830 aa21.6■■□□□ 1.05
TRIM29-221ENST00000627238 AIDAQ96BJ3 306 aa21.6■■□□□ 1.05
TRIM29-221ENST00000627238 ZNRF3Q9ULT6 936 aa21.6■■□□□ 1.05
TRIM29-221ENST00000627238 HOXB7P09629 217 aa21.59■■□□□ 1.05
TRIM29-221ENST00000627238 AOC3Q16853 763 aa21.59■■□□□ 1.05
TRIM29-221ENST00000627238 XAGE3Q8WTP9 111 aa21.59■■□□□ 1.05
TRIM29-221ENST00000627238 ADARB2Q9NS39 739 aaKnown RBP21.59■■□□□ 1.05
TRIM29-221ENST00000627238 GPRC5DQ9NZD1 345 aa21.59■■□□□ 1.05
TRIM29-221ENST00000627238 SH3TC1Q8TE82 1336 aa21.58■■□□□ 1.05
TRIM29-221ENST00000627238 MYBBP1AQ9BQG0 1328 aaKnown RBP21.58■■□□□ 1.05
TRIM29-221ENST00000627238 TCERG1O14776 1098 aaKnown RBP21.58■■□□□ 1.05
TRIM29-221ENST00000627238 KIAA2012Q0VF49 1180 aa21.58■■□□□ 1.05
TRIM29-221ENST00000627238 TMC4Q7Z404 712 aa21.58■■□□□ 1.05
TRIM29-221ENST00000627238 DDX60Q8IY21 1712 aaKnown RBP21.58■■□□□ 1.04
TRIM29-221ENST00000627238 WDR33Q9C0J8 1336 aaKnown RBP21.57■■□□□ 1.04
TRIM29-221ENST00000627238 DUOX1Q9NRD9 1551 aa21.57■■□□□ 1.04
TRIM29-221ENST00000627238 MAP2K1Q02750 393 aaPredicted RBP21.57■■□□□ 1.04
TRIM29-221ENST00000627238 CXCL9Q07325 125 aa21.57■■□□□ 1.04
TRIM29-221ENST00000627238 GRAPQ13588 217 aa21.57■■□□□ 1.04
TRIM29-221ENST00000627238 GRAPLQ8TC17 118 aaPredicted RBP21.57■■□□□ 1.04
TRIM29-221ENST00000627238 TRIM35Q9UPQ4 493 aa21.57■■□□□ 1.04
TRIM29-221ENST00000627238 DPP8Q6V1X1 898 aaPredicted RBP21.56■■□□□ 1.04
TRIM29-221ENST00000627238 PGAP2Q9UHJ9 254 aa21.56■■□□□ 1.04
TRIM29-221ENST00000627238 TRMT112Q9UI30 125 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms