RNA–Protein interactions for RNA: ENST00000624822.1

LINC01560-202, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

Gene LINC01560, Length 1,238 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-202ENST00000624822 IER5LQ5T953 404 aa12.31□□□□□ -0.44
LINC01560-202ENST00000624822 CCDC30Q5VVM6 783 aa12.31□□□□□ -0.44
LINC01560-202ENST00000624822 TBC1D9BQ66K14 1250 aa12.31□□□□□ -0.44
LINC01560-202ENST00000624822 TTLL7Q6ZT98 887 aa12.31□□□□□ -0.44
LINC01560-202ENST00000624822 CHMP4AQ9BY43 222 aa12.31□□□□□ -0.44
LINC01560-202ENST00000624822 ZBTB3Q9H5J0 574 aa12.31□□□□□ -0.44
LINC01560-202ENST00000624822 BCL2L12Q9HB09 334 aa12.31□□□□□ -0.44
LINC01560-202ENST00000624822 DDX21Q9NR30 783 aaKnown RBP eCLIP12.31□□□□□ -0.44
LINC01560-202ENST00000624822 PCDHB8Q9UN66 801 aa12.31□□□□□ -0.44
LINC01560-202ENST00000624822 CACNA1SQ13698 1873 aa12.3□□□□□ -0.44
LINC01560-202ENST00000624822 E9PSI1 815 aa12.3□□□□□ -0.44
LINC01560-202ENST00000624822 NFIXQ14938 502 aa12.3□□□□□ -0.44
LINC01560-202ENST00000624822 PDIA6Q15084 440 aa12.3□□□□□ -0.44
LINC01560-202ENST00000624822 XAGE3Q8WTP9 111 aa12.3□□□□□ -0.44
LINC01560-202ENST00000624822 FAM163AQ96GL9 167 aaPredicted RBP12.3□□□□□ -0.44
LINC01560-202ENST00000624822 SYT17Q9BSW7 474 aa12.3□□□□□ -0.44
LINC01560-202ENST00000624822 STK31Q9BXU1 1019 aa12.3□□□□□ -0.44
LINC01560-202ENST00000624822 MAP3K15Q6ZN16 1313 aa12.3□□□□□ -0.44
LINC01560-202ENST00000624822 POLRMTO00411 1230 aaKnown RBP12.29□□□□□ -0.44
LINC01560-202ENST00000624822 TCERG1O14776 1098 aaKnown RBP12.29□□□□□ -0.44
LINC01560-202ENST00000624822 DDR1Q08345 913 aa12.29□□□□□ -0.44
LINC01560-202ENST00000624822 COPS6Q7L5N1 327 aa12.29□□□□□ -0.44
LINC01560-202ENST00000624822 SETDB2Q96T68 719 aa12.29□□□□□ -0.44
LINC01560-202ENST00000624822 HYPKQ9NX55 129 aa12.29□□□□□ -0.44
LINC01560-202ENST00000624822 CARMIL3Q8ND23 1372 aa12.29□□□□□ -0.44
LINC01560-202ENST00000624822 ANKRD31Q8N7Z5 1873 aa12.28□□□□□ -0.44
LINC01560-202ENST00000624822 FAM177BA6PVY3 158 aa12.28□□□□□ -0.44
LINC01560-202ENST00000624822 SERPINB2P05120 415 aa12.28□□□□□ -0.44
LINC01560-202ENST00000624822 TM4SF1P30408 202 aa12.28□□□□□ -0.44
LINC01560-202ENST00000624822 HLFQ16534 295 aa12.28□□□□□ -0.44
LINC01560-202ENST00000624822 CLEC4GQ6UXB4 293 aa12.28□□□□□ -0.44
LINC01560-202ENST00000624822 CDCA7LQ96GN5 454 aa12.28□□□□□ -0.44
LINC01560-202ENST00000624822 NIP7Q9Y221 180 aaKnown RBP eCLIP12.28□□□□□ -0.44
LINC01560-202ENST00000624822 KIAA1551Q9HCM1 1747 aa12.28□□□□□ -0.44
LINC01560-202ENST00000624822 ERVV-1B6SEH8 477 aa12.27□□□□□ -0.45
LINC01560-202ENST00000624822 SLFN5Q08AF3 891 aa12.27□□□□□ -0.45
LINC01560-202ENST00000624822 LRP10Q7Z4F1 713 aa12.27□□□□□ -0.45
LINC01560-202ENST00000624822 NLGN2Q8NFZ4 835 aa12.27□□□□□ -0.45
LINC01560-202ENST00000624822 PHAXQ9H814 394 aaKnown RBP12.27□□□□□ -0.45
LINC01560-202ENST00000624822 CD2APQ9Y5K6 639 aa12.27□□□□□ -0.45
LINC01560-202ENST00000624822 C10orf71Q711Q0 1435 aa12.27□□□□□ -0.45
LINC01560-202ENST00000624822 DLEC1Q9Y238 1755 aa12.26□□□□□ -0.45
LINC01560-202ENST00000624822 BRCA1P38398 1863 aaKnown RBP12.26□□□□□ -0.45
LINC01560-202ENST00000624822 GPTP24298 496 aa12.26□□□□□ -0.45
LINC01560-202ENST00000624822 GIGYF2Q6Y7W6 1299 aaKnown RBP12.26□□□□□ -0.45
LINC01560-202ENST00000624822 VAMP4O75379 141 aa12.25□□□□□ -0.45
LINC01560-202ENST00000624822 GTF2E1P29083 439 aaPredicted RBP12.25□□□□□ -0.45
LINC01560-202ENST00000624822 ST5P78524 1137 aa12.25□□□□□ -0.45
LINC01560-202ENST00000624822 ANKRD13DQ6ZTN6 518 aa12.25□□□□□ -0.45
LINC01560-202ENST00000624822 RIC3Q7Z5B4 369 aa12.25□□□□□ -0.45
LINC01560-202ENST00000624822 NBPF5PQ86XG9 351 aaPredicted RBP12.25□□□□□ -0.45
LINC01560-202ENST00000624822 CCDC24Q8N4L8 307 aa12.25□□□□□ -0.45
LINC01560-202ENST00000624822 CNBD1Q8NA66 436 aa12.25□□□□□ -0.45
LINC01560-202ENST00000624822 WWC3Q9ULE0 1092 aa12.25□□□□□ -0.45
LINC01560-202ENST00000624822 ATP10DQ9P241 1426 aa12.25□□□□□ -0.45
LINC01560-202ENST00000624822 RGL2O15211 777 aa12.24□□□□□ -0.45
LINC01560-202ENST00000624822 DDX58O95786 925 aaKnown RBP12.24□□□□□ -0.45
LINC01560-202ENST00000624822 COL11A2P13942 1736 aaPredicted RBP12.24□□□□□ -0.45
LINC01560-202ENST00000624822 HSP90AB3PQ58FF7 597 aa12.24□□□□□ -0.45
LINC01560-202ENST00000624822 PLBD2Q8NHP8 589 aa12.24□□□□□ -0.45
LINC01560-202ENST00000624822 IRX5P78411 483 aaPredicted RBP12.23□□□□□ -0.45
LINC01560-202ENST00000624822 PRR5LQ6MZQ0 368 aa12.23□□□□□ -0.45
LINC01560-202ENST00000624822 SRCAPQ6ZRS2 3230 aa12.23□□□□□ -0.45
LINC01560-202ENST00000624822 LAMB2P55268 1798 aa12.23□□□□□ -0.45
LINC01560-202ENST00000624822 PXDNLA1KZ92 1463 aa12.22□□□□□ -0.45
LINC01560-202ENST00000624822 ZBED9Q6R2W3 1325 aa12.22□□□□□ -0.45
LINC01560-202ENST00000624822 UBN2Q6ZU65 1347 aa12.22□□□□□ -0.45
LINC01560-202ENST00000624822 TGFB2P61812 414 aa12.22□□□□□ -0.45
LINC01560-202ENST00000624822 FKBP5Q13451 457 aaPredicted RBP12.22□□□□□ -0.45
LINC01560-202ENST00000624822 TPTE2Q6XPS3 522 aa12.22□□□□□ -0.45
LINC01560-202ENST00000624822 PPP1R42Q7Z4L9 355 aa12.22□□□□□ -0.45
LINC01560-202ENST00000624822 ZNF428Q96B54 188 aa12.22□□□□□ -0.45
LINC01560-202ENST00000624822 NYXQ9GZU5 481 aa12.22□□□□□ -0.45
LINC01560-202ENST00000624822 ARFGEF1Q9Y6D6 1849 aa12.22□□□□□ -0.45
LINC01560-202ENST00000624822 TNRC6CQ9HCJ0 1690 aaKnown RBP12.22□□□□□ -0.45
LINC01560-202ENST00000624822 DDX60Q8IY21 1712 aaKnown RBP12.21□□□□□ -0.45
LINC01560-202ENST00000624822 A0A0G2JLW4 131 aa12.21□□□□□ -0.45
LINC01560-202ENST00000624822 ATP5J2-PTCD1G3V325 749 aa12.21□□□□□ -0.45
LINC01560-202ENST00000624822 PLCG2P16885 1265 aa12.21□□□□□ -0.45
LINC01560-202ENST00000624822 FLIIQ13045 1269 aa12.21□□□□□ -0.45
LINC01560-202ENST00000624822 TCIRG1Q13488 830 aa12.21□□□□□ -0.45
LINC01560-202ENST00000624822 GPR162Q16538 588 aa12.21□□□□□ -0.45
LINC01560-202ENST00000624822 PARP10Q53GL7 1025 aa12.21□□□□□ -0.45
LINC01560-202ENST00000624822 G2E3Q7L622 706 aa12.21□□□□□ -0.45
LINC01560-202ENST00000624822 NUTM1Q86Y26 1132 aa12.21□□□□□ -0.45
LINC01560-202ENST00000624822 ZNF34Q8IZ26 560 aa12.21□□□□□ -0.45
LINC01560-202ENST00000624822 MYD88Q99836 296 aa12.21□□□□□ -0.45
LINC01560-202ENST00000624822 MAP3K2Q9Y2U5 619 aa12.21□□□□□ -0.45
LINC01560-202ENST00000624822 CHD4Q14839 1912 aa12.21□□□□□ -0.46
LINC01560-202ENST00000624822 MYH3P11055 1940 aa12.2□□□□□ -0.46
LINC01560-202ENST00000624822 PI4KAP2A4QPH2 592 aa12.2□□□□□ -0.46
LINC01560-202ENST00000624822 DPEP1P16444 411 aa12.2□□□□□ -0.46
LINC01560-202ENST00000624822 CHRNA5P30532 468 aa12.2□□□□□ -0.46
LINC01560-202ENST00000624822 PDE6BP35913 854 aa12.2□□□□□ -0.46
LINC01560-202ENST00000624822 SUSD4Q5VX71 490 aa12.2□□□□□ -0.46
LINC01560-202ENST00000624822 TRMT2AQ8IZ69 625 aaKnown RBP12.2□□□□□ -0.46
LINC01560-202ENST00000624822 PI4KAP1Q8N8J0 262 aa12.2□□□□□ -0.46
LINC01560-202ENST00000624822 BCL2L13Q9BXK5 485 aa12.2□□□□□ -0.46
LINC01560-202ENST00000624822 H0YIN7 160 aa12.19□□□□□ -0.46
LINC01560-202ENST00000624822 NEXNQ0ZGT2 675 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms