RNA–Protein interactions for RNA: ENST00000624668.3

ATRX-217, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-217ENST00000624668 ADAMTS8Q9UP79 889 aa20.39■□□□□ 0.85
ATRX-217ENST00000624668 ZNF541Q9H0D2 1346 aa20.38■□□□□ 0.85
ATRX-217ENST00000624668 HOXA10P31260 410 aaPredicted RBP20.38■□□□□ 0.85
ATRX-217ENST00000624668 COL4A5P29400 1685 aa20.38■□□□□ 0.85
ATRX-217ENST00000624668 RTKN2Q8IZC4 609 aa20.37■□□□□ 0.85
ATRX-217ENST00000624668 WDR43Q15061 677 aaKnown RBP eCLIP20.36■□□□□ 0.85
ATRX-217ENST00000624668 SYNE4Q8N205 404 aa20.36■□□□□ 0.85
ATRX-217ENST00000624668 PRKRIP1Q9H875 184 aaPredicted RBP20.36■□□□□ 0.85
ATRX-217ENST00000624668 COPS6Q7L5N1 327 aa20.35■□□□□ 0.85
ATRX-217ENST00000624668 JMYQ8N9B5 988 aa20.35■□□□□ 0.85
ATRX-217ENST00000624668 XAGE3Q8WTP9 111 aa20.35■□□□□ 0.85
ATRX-217ENST00000624668 L3MBTL3Q96JM7 780 aaPredicted RBP20.35■□□□□ 0.85
ATRX-217ENST00000624668 IARSP41252 1262 aaKnown RBP20.34■□□□□ 0.85
ATRX-217ENST00000624668 AIMP1Q12904 312 aaKnown RBP20.34■□□□□ 0.85
ATRX-217ENST00000624668 PARP10Q53GL7 1025 aa20.34■□□□□ 0.85
ATRX-217ENST00000624668 IFFO2Q5TF58 517 aa20.34■□□□□ 0.85
ATRX-217ENST00000624668 RPGRQ92834 1020 aaKnown RBP20.34■□□□□ 0.85
ATRX-217ENST00000624668 PSMD1Q99460 953 aa20.34■□□□□ 0.85
ATRX-217ENST00000624668 LAS1LQ9Y4W2 734 aaKnown RBP20.34■□□□□ 0.85
ATRX-217ENST00000624668 ANKRD36CQ5JPF3 1778 aa20.34■□□□□ 0.85
ATRX-217ENST00000624668 CRAMP1Q96RY5 1269 aa20.33■□□□□ 0.85
ATRX-217ENST00000624668 DDX21Q9NR30 783 aaKnown RBP eCLIP20.33■□□□□ 0.85
ATRX-217ENST00000624668 FZD9O00144 591 aa20.32■□□□□ 0.84
ATRX-217ENST00000624668 SLC10A5Q5PT55 438 aa20.32■□□□□ 0.84
ATRX-217ENST00000624668 CHADLQ6NUI6 762 aa20.32■□□□□ 0.84
ATRX-217ENST00000624668 PPP1R42Q7Z4L9 355 aa20.32■□□□□ 0.84
ATRX-217ENST00000624668 NLRP10Q86W26 655 aa20.32■□□□□ 0.84
ATRX-217ENST00000624668 TAF1DQ9H5J8 278 aaPredicted RBP20.32■□□□□ 0.84
ATRX-217ENST00000624668 UTP14AQ9BVJ6 771 aaKnown RBP20.31■□□□□ 0.84
ATRX-217ENST00000624668 CHPF2Q9P2E5 772 aa20.31■□□□□ 0.84
ATRX-217ENST00000624668 SCN4AP35499 1836 aa20.31■□□□□ 0.84
ATRX-217ENST00000624668 TCERG1O14776 1098 aaKnown RBP20.3■□□□□ 0.84
ATRX-217ENST00000624668 PPEF1O14829 653 aaPredicted RBP20.3■□□□□ 0.84
ATRX-217ENST00000624668 RBM17Q96I25 401 aaKnown RBP20.3■□□□□ 0.84
ATRX-217ENST00000624668 LAMB2P55268 1798 aa20.3■□□□□ 0.84
ATRX-217ENST00000624668 IQCA1LA6NCM1 817 aa20.29■□□□□ 0.84
ATRX-217ENST00000624668 CC2D2BQ6DHV5 1058 aa20.29■□□□□ 0.84
ATRX-217ENST00000624668 ZNF428Q96B54 188 aa20.29■□□□□ 0.84
ATRX-217ENST00000624668 NLRP3Q96P20 1036 aa20.29■□□□□ 0.84
ATRX-217ENST00000624668 ADAMTSL1Q8N6G6 1762 aa20.29■□□□□ 0.84
ATRX-217ENST00000624668 HCLS1P14317 486 aaPredicted RBP20.28■□□□□ 0.84
ATRX-217ENST00000624668 TCIRG1Q13488 830 aa20.28■□□□□ 0.84
ATRX-217ENST00000624668 HDGFL1Q5TGJ6 251 aa20.28■□□□□ 0.84
ATRX-217ENST00000624668 CFAP44Q96MT7 982 aa20.28■□□□□ 0.84
ATRX-217ENST00000624668 MBIPQ9NS73 344 aa20.28■□□□□ 0.84
ATRX-217ENST00000624668 ABCC4O15439 1325 aa20.27■□□□□ 0.84
ATRX-217ENST00000624668 RNF123Q5XPI4 1314 aa20.27■□□□□ 0.84
ATRX-217ENST00000624668 ZNF853P0CG23 659 aa20.27■□□□□ 0.84
ATRX-217ENST00000624668 LDHDQ86WU2 507 aa20.27■□□□□ 0.84
ATRX-217ENST00000624668 LTBP1Q14766 1721 aa20.27■□□□□ 0.83
ATRX-217ENST00000624668 APAF1O14727 1248 aa20.26■□□□□ 0.83
ATRX-217ENST00000624668 HOXB7P09629 217 aa20.26■□□□□ 0.83
ATRX-217ENST00000624668 HSP90AB3PQ58FF7 597 aa20.26■□□□□ 0.83
ATRX-217ENST00000624668 DUSP27Q5VZP5 1158 aa20.26■□□□□ 0.83
ATRX-217ENST00000624668 HACL1Q9UJ83 578 aa20.26■□□□□ 0.83
ATRX-217ENST00000624668 ATP6V0A2Q9Y487 856 aa20.26■□□□□ 0.83
ATRX-217ENST00000624668 PASKQ96RG2 1323 aa20.26■□□□□ 0.83
ATRX-217ENST00000624668 GPC2Q8N158 579 aa20.25■□□□□ 0.83
ATRX-217ENST00000624668 JDP2Q8WYK2 163 aa20.25■□□□□ 0.83
ATRX-217ENST00000624668 TRMT112Q9UI30 125 aaKnown RBP20.25■□□□□ 0.83
ATRX-217ENST00000624668 EPHX2P34913 555 aa20.24■□□□□ 0.83
ATRX-217ENST00000624668 GRIPAP1Q4V328 841 aa20.24■□□□□ 0.83
ATRX-217ENST00000624668 PLBD2Q8NHP8 589 aa20.24■□□□□ 0.83
ATRX-217ENST00000624668 COL4A1P02462 1669 aa20.23■□□□□ 0.83
ATRX-217ENST00000624668 ITGBL1O95965 494 aaPredicted RBP20.23■□□□□ 0.83
ATRX-217ENST00000624668 CCDC184Q52MB2 194 aa20.23■□□□□ 0.83
ATRX-217ENST00000624668 EAPPQ56P03 285 aaPredicted RBP20.23■□□□□ 0.83
ATRX-217ENST00000624668 DDX60Q8IY21 1712 aaKnown RBP20.23■□□□□ 0.83
ATRX-217ENST00000624668 LARGE2Q8N3Y3 721 aa20.23■□□□□ 0.83
ATRX-217ENST00000624668 ISCA1Q9BUE6 129 aa20.23■□□□□ 0.83
ATRX-217ENST00000624668 CREBZFQ9NS37 354 aa20.23■□□□□ 0.83
ATRX-217ENST00000624668 DBF4Q9UBU7 674 aaPredicted RBP20.23■□□□□ 0.83
ATRX-217ENST00000624668 SH3TC1Q8TE82 1336 aa20.23■□□□□ 0.83
ATRX-217ENST00000624668 TAF1P21675 1872 aa20.22■□□□□ 0.83
ATRX-217ENST00000624668 AOC3Q16853 763 aa20.22■□□□□ 0.83
ATRX-217ENST00000624668 ANKRD13DQ6ZTN6 518 aa20.22■□□□□ 0.83
ATRX-217ENST00000624668 GJA3Q9Y6H8 435 aa20.22■□□□□ 0.83
ATRX-217ENST00000624668 ATP5J2-PTCD1G3V325 749 aa20.21■□□□□ 0.83
ATRX-217ENST00000624668 EIF6P56537 245 aaKnown RBP20.21■□□□□ 0.83
ATRX-217ENST00000624668 RTFDC1Q9BY42 306 aaPredicted RBP20.21■□□□□ 0.83
ATRX-217ENST00000624668 IFT57Q9NWB7 429 aa20.21■□□□□ 0.83
ATRX-217ENST00000624668 PPIP5K2O43314 1243 aa20.2■□□□□ 0.82
ATRX-217ENST00000624668 SCNN1DP51172 638 aa20.2■□□□□ 0.82
ATRX-217ENST00000624668 COL13A1Q5TAT6 717 aaPredicted RBP20.2■□□□□ 0.82
ATRX-217ENST00000624668 FAM89AQ96GI7 184 aa20.2■□□□□ 0.82
ATRX-217ENST00000624668 MKRN1Q9UHC7 482 aaKnown RBP20.2■□□□□ 0.82
ATRX-217ENST00000624668 DUOX1Q9NRD9 1551 aa20.2■□□□□ 0.82
ATRX-217ENST00000624668 ELL2O00472 640 aaPredicted RBP20.19■□□□□ 0.82
ATRX-217ENST00000624668 BBOX1O75936 387 aa20.19■□□□□ 0.82
ATRX-217ENST00000624668 EPS15P42566 896 aa20.19■□□□□ 0.82
ATRX-217ENST00000624668 GRAPQ13588 217 aa20.19■□□□□ 0.82
ATRX-217ENST00000624668 MAP1SQ66K74 1059 aaPredicted RBP20.19■□□□□ 0.82
ATRX-217ENST00000624668 SP8Q8IXZ3 490 aa20.19■□□□□ 0.82
ATRX-217ENST00000624668 C8orf58Q8NAV2 365 aa20.19■□□□□ 0.82
ATRX-217ENST00000624668 GRAPLQ8TC17 118 aaPredicted RBP20.19■□□□□ 0.82
ATRX-217ENST00000624668 PHAXQ9H814 394 aaKnown RBP20.19■□□□□ 0.82
ATRX-217ENST00000624668 HYPKQ9NX55 129 aa20.19■□□□□ 0.82
ATRX-217ENST00000624668 DDX46Q7L014 1031 aaKnown RBP20.18■□□□□ 0.82
ATRX-217ENST00000624668 PNMA8AQ86V59 439 aaPredicted RBP20.18■□□□□ 0.82
ATRX-217ENST00000624668 NIM1KQ8IY84 436 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms