RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 TRIM35Q9UPQ4 493 aa12.02□□□□□ -0.49
PCDHB9-202ENST00000623266 MAPK8IP3Q9UPT6 1336 aa12.02□□□□□ -0.49
PCDHB9-202ENST00000623266 CHL1O00533 1208 aa12.01□□□□□ -0.49
PCDHB9-202ENST00000623266 IARSP41252 1262 aaKnown RBP12.01□□□□□ -0.49
PCDHB9-202ENST00000623266 NEUROD2Q15784 382 aa12.01□□□□□ -0.49
PCDHB9-202ENST00000623266 KRT24Q2M2I5 525 aa12.01□□□□□ -0.49
PCDHB9-202ENST00000623266 KIF6Q6ZMV9 814 aa12.01□□□□□ -0.49
PCDHB9-202ENST00000623266 CCDC146Q8IYE0 955 aa12.01□□□□□ -0.49
PCDHB9-202ENST00000623266 ZNF541Q9H0D2 1346 aa12.01□□□□□ -0.49
PCDHB9-202ENST00000623266 COPS6Q7L5N1 327 aa12□□□□□ -0.49
PCDHB9-202ENST00000623266 NECTIN2Q92692 538 aa12□□□□□ -0.49
PCDHB9-202ENST00000623266 CRAMP1Q96RY5 1269 aa12□□□□□ -0.49
PCDHB9-202ENST00000623266 PSMD1Q99460 953 aa12□□□□□ -0.49
PCDHB9-202ENST00000623266 ADAMTS8Q9UP79 889 aa12□□□□□ -0.49
PCDHB9-202ENST00000623266 ERBB4Q15303 1308 aa12□□□□□ -0.49
PCDHB9-202ENST00000623266 COL4A5P29400 1685 aa12□□□□□ -0.49
PCDHB9-202ENST00000623266 TAF1P21675 1872 aa12□□□□□ -0.49
PCDHB9-202ENST00000623266 TCERG1O14776 1098 aaKnown RBP11.99□□□□□ -0.49
PCDHB9-202ENST00000623266 PASKQ96RG2 1323 aa11.99□□□□□ -0.49
PCDHB9-202ENST00000623266 AIMP1Q12904 312 aaKnown RBP11.98□□□□□ -0.49
PCDHB9-202ENST00000623266 CC2D2BQ6DHV5 1058 aa11.98□□□□□ -0.49
PCDHB9-202ENST00000623266 PPP1R42Q7Z4L9 355 aa11.98□□□□□ -0.49
PCDHB9-202ENST00000623266 XAGE3Q8WTP9 111 aa11.98□□□□□ -0.49
PCDHB9-202ENST00000623266 RBM17Q96I25 401 aaKnown RBP11.98□□□□□ -0.49
PCDHB9-202ENST00000623266 NLRP3Q96P20 1036 aa11.98□□□□□ -0.49
PCDHB9-202ENST00000623266 RIC1Q4ADV7 1423 aa11.97□□□□□ -0.49
PCDHB9-202ENST00000623266 IBTKQ9P2D0 1353 aaPredicted RBP11.97□□□□□ -0.49
PCDHB9-202ENST00000623266 MYBBP1AQ9BQG0 1328 aaKnown RBP11.97□□□□□ -0.49
PCDHB9-202ENST00000623266 IQCA1LA6NCM1 817 aa11.97□□□□□ -0.49
PCDHB9-202ENST00000623266 TCIRG1Q13488 830 aa11.97□□□□□ -0.49
PCDHB9-202ENST00000623266 PARP10Q53GL7 1025 aa11.97□□□□□ -0.49
PCDHB9-202ENST00000623266 NLRP10Q86W26 655 aa11.97□□□□□ -0.49
PCDHB9-202ENST00000623266 LDHDQ86WU2 507 aa11.97□□□□□ -0.49
PCDHB9-202ENST00000623266 RPGRQ92834 1020 aaKnown RBP11.97□□□□□ -0.49
PCDHB9-202ENST00000623266 RUNDC1Q96C34 613 aa11.97□□□□□ -0.49
PCDHB9-202ENST00000623266 UTP14AQ9BVJ6 771 aaKnown RBP11.97□□□□□ -0.49
PCDHB9-202ENST00000623266 DDX21Q9NR30 783 aaKnown RBP eCLIP11.97□□□□□ -0.49
PCDHB9-202ENST00000623266 CREBZFQ9NS37 354 aa11.97□□□□□ -0.49
PCDHB9-202ENST00000623266 HACL1Q9UJ83 578 aa11.97□□□□□ -0.49
PCDHB9-202ENST00000623266 LAMB2P55268 1798 aa11.97□□□□□ -0.49
PCDHB9-202ENST00000623266 ADAMTSL1Q8N6G6 1762 aa11.97□□□□□ -0.49
PCDHB9-202ENST00000623266 RNF123Q5XPI4 1314 aa11.96□□□□□ -0.49
PCDHB9-202ENST00000623266 HCLS1P14317 486 aaPredicted RBP11.96□□□□□ -0.49
PCDHB9-202ENST00000623266 EPHX2P34913 555 aa11.96□□□□□ -0.49
PCDHB9-202ENST00000623266 GPC2Q8N158 579 aa11.96□□□□□ -0.49
PCDHB9-202ENST00000623266 ZNF428Q96B54 188 aa11.96□□□□□ -0.49
PCDHB9-202ENST00000623266 MKRN1Q9UHC7 482 aaKnown RBP11.96□□□□□ -0.49
PCDHB9-202ENST00000623266 LAS1LQ9Y4W2 734 aaKnown RBP11.96□□□□□ -0.49
PCDHB9-202ENST00000623266 LTBP1Q14766 1721 aa11.95□□□□□ -0.5
PCDHB9-202ENST00000623266 HSPA1AP0DMV8 641 aaKnown RBP11.95□□□□□ -0.5
PCDHB9-202ENST00000623266 HSPA1BP0DMV9 641 aaKnown RBP11.95□□□□□ -0.5
PCDHB9-202ENST00000623266 EAPPQ56P03 285 aaPredicted RBP11.95□□□□□ -0.5
PCDHB9-202ENST00000623266 CNTROBQ8N137 903 aa11.95□□□□□ -0.5
PCDHB9-202ENST00000623266 JDP2Q8WYK2 163 aa11.95□□□□□ -0.5
PCDHB9-202ENST00000623266 CLEC11AQ9Y240 323 aa11.95□□□□□ -0.5
PCDHB9-202ENST00000623266 ATP6V0A2Q9Y487 856 aa11.95□□□□□ -0.5
PCDHB9-202ENST00000623266 ANKRD36CQ5JPF3 1778 aa11.95□□□□□ -0.5
PCDHB9-202ENST00000623266 ABCC4O15439 1325 aa11.94□□□□□ -0.5
PCDHB9-202ENST00000623266 PPEF1O14829 653 aaPredicted RBP11.94□□□□□ -0.5
PCDHB9-202ENST00000623266 BBOX1O75936 387 aa11.94□□□□□ -0.5
PCDHB9-202ENST00000623266 EPS15P42566 896 aa11.94□□□□□ -0.5
PCDHB9-202ENST00000623266 SCNN1DP51172 638 aa11.94□□□□□ -0.5
PCDHB9-202ENST00000623266 FMR1Q06787 632 aaKnown RBP eCLIP11.94□□□□□ -0.5
PCDHB9-202ENST00000623266 LMOD3Q0VAK6 560 aa11.94□□□□□ -0.5
PCDHB9-202ENST00000623266 GRIPAP1Q4V328 841 aa11.94□□□□□ -0.5
PCDHB9-202ENST00000623266 MAP1SQ66K74 1059 aaPredicted RBP11.94□□□□□ -0.5
PCDHB9-202ENST00000623266 SP8Q8IXZ3 490 aa11.94□□□□□ -0.5
PCDHB9-202ENST00000623266 RTFDC1Q9BY42 306 aaPredicted RBP11.94□□□□□ -0.5
PCDHB9-202ENST00000623266 PRKRIP1Q9H875 184 aaPredicted RBP11.94□□□□□ -0.5
PCDHB9-202ENST00000623266 CHPF2Q9P2E5 772 aa11.94□□□□□ -0.5
PCDHB9-202ENST00000623266 GJA3Q9Y6H8 435 aa11.94□□□□□ -0.5
PCDHB9-202ENST00000623266 ZNF853P0CG23 659 aa11.93□□□□□ -0.5
PCDHB9-202ENST00000623266 EIF6P56537 245 aaKnown RBP11.93□□□□□ -0.5
PCDHB9-202ENST00000623266 ANKRD13DQ6ZTN6 518 aa11.93□□□□□ -0.5
PCDHB9-202ENST00000623266 PNMA8AQ86V59 439 aaPredicted RBP11.93□□□□□ -0.5
PCDHB9-202ENST00000623266 LARGE2Q8N3Y3 721 aa11.93□□□□□ -0.5
PCDHB9-202ENST00000623266 CFAP44Q96MT7 982 aa11.93□□□□□ -0.5
PCDHB9-202ENST00000623266 ISCA1Q9BUE6 129 aa11.93□□□□□ -0.5
PCDHB9-202ENST00000623266 TRMT112Q9UI30 125 aaKnown RBP11.93□□□□□ -0.5
PCDHB9-202ENST00000623266 TMEM88BA6NKF7 163 aa11.92□□□□□ -0.5
PCDHB9-202ENST00000623266 VEGFBP49765 207 aa11.92□□□□□ -0.5
PCDHB9-202ENST00000623266 CXCL9Q07325 125 aa11.92□□□□□ -0.5
PCDHB9-202ENST00000623266 AOC3Q16853 763 aa11.92□□□□□ -0.5
PCDHB9-202ENST00000623266 HSP90AB3PQ58FF7 597 aa11.92□□□□□ -0.5
PCDHB9-202ENST00000623266 VPS33BQ9H267 617 aa11.92□□□□□ -0.5
PCDHB9-202ENST00000623266 CNTNAP1P78357 1384 aa11.92□□□□□ -0.5
PCDHB9-202ENST00000623266 ATP5J2-PTCD1G3V325 749 aa11.91□□□□□ -0.5
PCDHB9-202ENST00000623266 WDR43Q15061 677 aaKnown RBP eCLIP11.91□□□□□ -0.5
PCDHB9-202ENST00000623266 DUSP27Q5VZP5 1158 aa11.91□□□□□ -0.5
PCDHB9-202ENST00000623266 PLBD2Q8NHP8 589 aa11.91□□□□□ -0.5
PCDHB9-202ENST00000623266 FAM89AQ96GI7 184 aa11.91□□□□□ -0.5
PCDHB9-202ENST00000623266 MBIPQ9NS73 344 aa11.91□□□□□ -0.5
PCDHB9-202ENST00000623266 SH3TC1Q8TE82 1336 aa11.9□□□□□ -0.5
PCDHB9-202ENST00000623266 APAF1O14727 1248 aa11.9□□□□□ -0.5
PCDHB9-202ENST00000623266 PPIP5K2O43314 1243 aa11.9□□□□□ -0.5
PCDHB9-202ENST00000623266 TRIM28Q13263 835 aaKnown RBP11.9□□□□□ -0.5
PCDHB9-202ENST00000623266 DEFB115Q30KQ5 88 aa11.9□□□□□ -0.5
PCDHB9-202ENST00000623266 HDGFL1Q5TGJ6 251 aa11.9□□□□□ -0.5
PCDHB9-202ENST00000623266 CST9Q5W186 159 aa11.9□□□□□ -0.5
PCDHB9-202ENST00000623266 DDX46Q7L014 1031 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms