RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 TOGARAM1Q9Y4F4 1720 aa3.32□□□□□ -1.88
CPNE3-211ENST00000621526 SCN4AP35499 1836 aa3.32□□□□□ -1.88
CPNE3-211ENST00000621526 COL6A3P12111 3177 aa3.31□□□□□ -1.88
CPNE3-211ENST00000621526 CASP8AP2Q9UKL3 1982 aa3.31□□□□□ -1.88
CPNE3-211ENST00000621526 BRCA1P38398 1863 aaKnown RBP3.31□□□□□ -1.88
CPNE3-211ENST00000621526 MAP2P11137 1827 aaKnown RBP3.31□□□□□ -1.88
CPNE3-211ENST00000621526 THSD7BQ9C0I4 1608 aa3.31□□□□□ -1.88
CPNE3-211ENST00000621526 COL15A1P39059 1388 aa3.31□□□□□ -1.88
CPNE3-211ENST00000621526 ERBB4Q15303 1308 aa3.31□□□□□ -1.88
CPNE3-211ENST00000621526 KIF7Q2M1P5 1343 aa3.31□□□□□ -1.88
CPNE3-211ENST00000621526 CAMTA2O94983 1202 aa3.31□□□□□ -1.88
CPNE3-211ENST00000621526 COL9A1P20849 921 aa3.31□□□□□ -1.88
CPNE3-211ENST00000621526 HOXD11P31277 338 aaPredicted RBP3.31□□□□□ -1.88
CPNE3-211ENST00000621526 BMP8BP34820 402 aa3.31□□□□□ -1.88
CPNE3-211ENST00000621526 GMPSP49915 693 aaPredicted RBP3.31□□□□□ -1.88
CPNE3-211ENST00000621526 SREBF2Q12772 1141 aa3.31□□□□□ -1.88
CPNE3-211ENST00000621526 ZNF530Q6P9A1 599 aaPredicted RBP3.31□□□□□ -1.88
CPNE3-211ENST00000621526 OLFM4Q6UX06 510 aa3.31□□□□□ -1.88
CPNE3-211ENST00000621526 OTOP1Q7RTM1 612 aa3.31□□□□□ -1.88
CPNE3-211ENST00000621526 NBPF5PQ86XG9 351 aaPredicted RBP3.31□□□□□ -1.88
CPNE3-211ENST00000621526 CCDC24Q8N4L8 307 aa3.31□□□□□ -1.88
CPNE3-211ENST00000621526 DPF3Q92784 378 aa3.31□□□□□ -1.88
CPNE3-211ENST00000621526 SYMPKQ92797 1274 aaKnown RBP3.31□□□□□ -1.88
CPNE3-211ENST00000621526 CRAMP1Q96RY5 1269 aa3.31□□□□□ -1.88
CPNE3-211ENST00000621526 BCL2L13Q9BXK5 485 aa3.31□□□□□ -1.88
CPNE3-211ENST00000621526 SLC52A2Q9HAB3 445 aa3.31□□□□□ -1.88
CPNE3-211ENST00000621526 TBC1D2BQ9UPU7 963 aa3.31□□□□□ -1.88
CPNE3-211ENST00000621526 MKI67P46013 3256 aaKnown RBP3.31□□□□□ -1.88
CPNE3-211ENST00000621526 TAF1LQ8IZX4 1826 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 ADAMTSL1Q8N6G6 1762 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 RGPD5Q99666 1765 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 NPC1L1Q9UHC9 1359 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 UNCXA6NJT0 531 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 PPM1GO15355 546 aaPredicted RBP3.3□□□□□ -1.88
CPNE3-211ENST00000621526 BBOX1O75936 387 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 RPS12P25398 132 aaKnown RBP3.3□□□□□ -1.88
CPNE3-211ENST00000621526 PLA2G5P39877 138 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 LRIT3Q3SXY7 679 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 RASAL3Q86YV0 1011 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.3□□□□□ -1.88
CPNE3-211ENST00000621526 SULF1Q8IWU6 871 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 DEFB123Q8N688 67 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 NKX2-3Q8TAU0 364 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 FAM122AQ96E09 287 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 ERO1AQ96HE7 468 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 ZNF333Q96JL9 665 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 HTATIP2Q9BUP3 242 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 MTMR10Q9NXD2 777 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 POLKQ9UBT6 870 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 ZNF652Q9Y2D9 606 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 TRIM17Q9Y577 477 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 EMILIN1Q9Y6C2 1016 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 LTBP1Q14766 1721 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 DOT1LQ8TEK3 1739 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 TRIOBPQ9H2D6 2365 aa3.3□□□□□ -1.88
CPNE3-211ENST00000621526 RANBP2P49792 3224 aaKnown RBP3.29□□□□□ -1.88
CPNE3-211ENST00000621526 ROCK2O75116 1388 aaKnown RBP3.29□□□□□ -1.88
CPNE3-211ENST00000621526 PPIP5K2O43314 1243 aa3.29□□□□□ -1.88
CPNE3-211ENST00000621526 GTF2E1P29083 439 aaPredicted RBP3.29□□□□□ -1.88
CPNE3-211ENST00000621526 KIAA2012Q0VF49 1180 aa3.29□□□□□ -1.88
CPNE3-211ENST00000621526 EIF4A2Q14240 407 aaKnown RBP3.29□□□□□ -1.88
CPNE3-211ENST00000621526 SLC10A5Q5PT55 438 aa3.29□□□□□ -1.88
CPNE3-211ENST00000621526 OTUD7BQ6GQQ9 843 aa3.29□□□□□ -1.88
CPNE3-211ENST00000621526 FAM109BQ6ICB4 259 aaPredicted RBP3.29□□□□□ -1.88
CPNE3-211ENST00000621526 DLK2Q6UY11 383 aa3.29□□□□□ -1.88
CPNE3-211ENST00000621526 DZIP3Q86Y13 1208 aaKnown RBP3.29□□□□□ -1.88
CPNE3-211ENST00000621526 SP8Q8IXZ3 490 aa3.29□□□□□ -1.88
CPNE3-211ENST00000621526 TRPM4Q8TD43 1214 aa3.29□□□□□ -1.88
CPNE3-211ENST00000621526 RBM17Q96I25 401 aaKnown RBP3.29□□□□□ -1.88
CPNE3-211ENST00000621526 ZNF496Q96IT1 587 aaPredicted RBP3.29□□□□□ -1.88
CPNE3-211ENST00000621526 NYXQ9GZU5 481 aa3.29□□□□□ -1.88
CPNE3-211ENST00000621526 R3HDMLQ9H3Y0 253 aa3.29□□□□□ -1.88
CPNE3-211ENST00000621526 EFCC1Q9HA90 598 aa3.29□□□□□ -1.88
CPNE3-211ENST00000621526 LGR6Q9HBX8 967 aa3.29□□□□□ -1.88
CPNE3-211ENST00000621526 ATP6V0A2Q9Y487 856 aa3.29□□□□□ -1.88
CPNE3-211ENST00000621526 ZNF831Q5JPB2 1677 aa3.29□□□□□ -1.88
CPNE3-211ENST00000621526 FAM208AQ9UK61 1670 aaKnown RBP3.29□□□□□ -1.88
CPNE3-211ENST00000621526 ADAMTS7Q9UKP4 1686 aa3.29□□□□□ -1.88
CPNE3-211ENST00000621526 SNED1Q8TER0 1413 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 RAB3GAP2Q9H2M9 1393 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 SYNGAP1Q96PV0 1343 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 PRAMEF22A3QJZ6 481 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 MANSC4A6NHS7 340 aaPredicted RBP3.28□□□□□ -1.88
CPNE3-211ENST00000621526 WTIPA6NIX2 430 aaPredicted RBP3.28□□□□□ -1.88
CPNE3-211ENST00000621526 POTEB2H3BUK9 544 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 SOX1O00570 391 aaPredicted RBP3.28□□□□□ -1.88
CPNE3-211ENST00000621526 ZBTB7BO15156 539 aaPredicted RBP3.28□□□□□ -1.88
CPNE3-211ENST00000621526 RNMTO43148 476 aaKnown RBP3.28□□□□□ -1.88
CPNE3-211ENST00000621526 RAD17O75943 681 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 GNRH1P01148 92 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 MMP14P50281 582 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 PRMT2P55345 433 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 SP3Q02447 781 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 SLC39A6Q13433 755 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 TCIRG1Q13488 830 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 AOC3Q16853 763 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 SLC4A8Q2Y0W8 1093 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 CDCA8Q53HL2 280 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 LDLRAD1Q5T700 205 aa3.28□□□□□ -1.88
CPNE3-211ENST00000621526 SAMD7Q7Z3H4 446 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms