RNA–Protein interactions for RNA: ENST00000619368.4

RDM1-225, Transcript of RAD52 motif containing 1, human

TSL 1 (best)

Gene RDM1, Length 506 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDM1-225	ENST00000619368	PDIA6	Q15084	440 aa		11.94	□□□□□ -0.5
RDM1-225	ENST00000619368	EAPP	Q56P03	285 aa	Predicted RBP	11.94	□□□□□ -0.5
RDM1-225	ENST00000619368	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.94	□□□□□ -0.5
RDM1-225	ENST00000619368	C3orf67	Q6ZVT6	689 aa		11.94	□□□□□ -0.5
RDM1-225	ENST00000619368	LRP10	Q7Z4F1	713 aa		11.94	□□□□□ -0.5
RDM1-225	ENST00000619368	PSMD1	Q99460	953 aa		11.94	□□□□□ -0.5
RDM1-225	ENST00000619368	PNN	Q9H307	717 aa	Known RBP	11.94	□□□□□ -0.5
RDM1-225	ENST00000619368	HACL1	Q9UJ83	578 aa		11.94	□□□□□ -0.5
RDM1-225	ENST00000619368	LTBP1	Q14766	1721 aa		11.94	□□□□□ -0.5
RDM1-225	ENST00000619368	RIC1	Q4ADV7	1423 aa		11.94	□□□□□ -0.5
RDM1-225	ENST00000619368	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.93	□□□□□ -0.5
RDM1-225	ENST00000619368	ERBB4	Q15303	1308 aa		11.93	□□□□□ -0.5
RDM1-225	ENST00000619368	RNF123	Q5XPI4	1314 aa		11.93	□□□□□ -0.5
RDM1-225	ENST00000619368	NTSR2	O95665	410 aa		11.93	□□□□□ -0.5
RDM1-225	ENST00000619368	EPHX2	P34913	555 aa		11.93	□□□□□ -0.5
RDM1-225	ENST00000619368	RIPK4	P57078	832 aa		11.93	□□□□□ -0.5
RDM1-225	ENST00000619368	PROSER3	Q2NL68	480 aa		11.93	□□□□□ -0.5
RDM1-225	ENST00000619368	TNS4	Q8IZW8	715 aa		11.93	□□□□□ -0.5
RDM1-225	ENST00000619368	RPGR	Q92834	1020 aa	Known RBP	11.93	□□□□□ -0.5
RDM1-225	ENST00000619368	TSPYL4	Q9UJ04	414 aa		11.93	□□□□□ -0.5
RDM1-225	ENST00000619368	TCERG1	O14776	1098 aa	Known RBP	11.92	□□□□□ -0.5
RDM1-225	ENST00000619368	ANXA1	P04083	346 aa		11.92	□□□□□ -0.5
RDM1-225	ENST00000619368	EIF2S2	P20042	333 aa	Known RBP	11.92	□□□□□ -0.5
RDM1-225	ENST00000619368	CC2D2B	Q6DHV5	1058 aa		11.92	□□□□□ -0.5
RDM1-225	ENST00000619368	GPC2	Q8N158	579 aa		11.92	□□□□□ -0.5
RDM1-225	ENST00000619368	RBM17	Q96I25	401 aa	Known RBP	11.92	□□□□□ -0.5
RDM1-225	ENST00000619368	CRAMP1	Q96RY5	1269 aa		11.92	□□□□□ -0.5
RDM1-225	ENST00000619368	CLEC11A	Q9Y240	323 aa		11.92	□□□□□ -0.5
RDM1-225	ENST00000619368	CNTNAP1	P78357	1384 aa		11.92	□□□□□ -0.5
RDM1-225	ENST00000619368	TMPO	P42166	694 aa	Known RBP	11.91	□□□□□ -0.5
RDM1-225	ENST00000619368	MAP1S	Q66K74	1059 aa	Predicted RBP	11.91	□□□□□ -0.5
RDM1-225	ENST00000619368	JDP2	Q8WYK2	163 aa		11.91	□□□□□ -0.5
RDM1-225	ENST00000619368	TMEM88B	A6NKF7	163 aa		11.9	□□□□□ -0.5
RDM1-225	ENST00000619368	PPEF1	O14829	653 aa	Predicted RBP	11.9	□□□□□ -0.5
RDM1-225	ENST00000619368	PARP10	Q53GL7	1025 aa		11.9	□□□□□ -0.5
RDM1-225	ENST00000619368	SLC10A5	Q5PT55	438 aa		11.9	□□□□□ -0.5
RDM1-225	ENST00000619368	PPP1R42	Q7Z4L9	355 aa		11.9	□□□□□ -0.5
RDM1-225	ENST00000619368	PNMA8A	Q86V59	439 aa	Predicted RBP	11.9	□□□□□ -0.5
RDM1-225	ENST00000619368	CNTROB	Q8N137	903 aa		11.9	□□□□□ -0.5
RDM1-225	ENST00000619368	NECTIN2	Q92692	538 aa		11.9	□□□□□ -0.5
RDM1-225	ENST00000619368	TRPM7	Q96QT4	1865 aa		11.9	□□□□□ -0.5
RDM1-225	ENST00000619368	GJA3	Q9Y6H8	435 aa		11.9	□□□□□ -0.5
RDM1-225	ENST00000619368	VEGFB	P49765	207 aa		11.89	□□□□□ -0.51
RDM1-225	ENST00000619368	EIF6	P56537	245 aa	Known RBP	11.89	□□□□□ -0.51
RDM1-225	ENST00000619368	RALBP1	Q15311	655 aa		11.89	□□□□□ -0.51
RDM1-225	ENST00000619368	KRT24	Q2M2I5	525 aa		11.89	□□□□□ -0.51
RDM1-225	ENST00000619368	GRIPAP1	Q4V328	841 aa		11.89	□□□□□ -0.51
RDM1-225	ENST00000619368	CCDC146	Q8IYE0	955 aa		11.89	□□□□□ -0.51
RDM1-225	ENST00000619368	LARGE2	Q8N3Y3	721 aa		11.89	□□□□□ -0.51
RDM1-225	ENST00000619368	NLRP3	Q96P20	1036 aa		11.89	□□□□□ -0.51
RDM1-225	ENST00000619368	UTP14A	Q9BVJ6	771 aa	Known RBP	11.89	□□□□□ -0.51
RDM1-225	ENST00000619368	BABAM1	Q9NWV8	329 aa		11.89	□□□□□ -0.51
RDM1-225	ENST00000619368	EPS15	P42566	896 aa		11.88	□□□□□ -0.51
RDM1-225	ENST00000619368	SCNN1D	P51172	638 aa		11.88	□□□□□ -0.51
RDM1-225	ENST00000619368	AIMP1	Q12904	312 aa	Known RBP	11.88	□□□□□ -0.51
RDM1-225	ENST00000619368	NEUROD2	Q15784	382 aa		11.88	□□□□□ -0.51
RDM1-225	ENST00000619368	COPS6	Q7L5N1	327 aa		11.88	□□□□□ -0.51
RDM1-225	ENST00000619368	XAGE3	Q8WTP9	111 aa		11.88	□□□□□ -0.51
RDM1-225	ENST00000619368	ATP6V0A2	Q9Y487	856 aa		11.88	□□□□□ -0.51
RDM1-225	ENST00000619368	DDX60	Q8IY21	1712 aa	Known RBP	11.88	□□□□□ -0.51
RDM1-225	ENST00000619368	ABCC4	O15439	1325 aa		11.87	□□□□□ -0.51
RDM1-225	ENST00000619368	CHL1	O00533	1208 aa		11.87	□□□□□ -0.51
RDM1-225	ENST00000619368	FOXN1	O15353	648 aa		11.87	□□□□□ -0.51
RDM1-225	ENST00000619368	NLRP10	Q86W26	655 aa		11.87	□□□□□ -0.51
RDM1-225	ENST00000619368	PPIP5K2	O43314	1243 aa		11.86	□□□□□ -0.51
RDM1-225	ENST00000619368	HCLS1	P14317	486 aa	Predicted RBP	11.86	□□□□□ -0.51
RDM1-225	ENST00000619368	LMOD1	P29536	600 aa	Predicted RBP	11.86	□□□□□ -0.51
RDM1-225	ENST00000619368	FMR1	Q06787	632 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
RDM1-225	ENST00000619368	LMOD3	Q0VAK6	560 aa		11.86	□□□□□ -0.51
RDM1-225	ENST00000619368	DDX10	Q13206	875 aa	Known RBP	11.86	□□□□□ -0.51
RDM1-225	ENST00000619368	TCIRG1	Q13488	830 aa		11.86	□□□□□ -0.51
RDM1-225	ENST00000619368	AOC3	Q16853	763 aa		11.86	□□□□□ -0.51
RDM1-225	ENST00000619368	NIM1K	Q8IY84	436 aa		11.86	□□□□□ -0.51
RDM1-225	ENST00000619368	ZNF428	Q96B54	188 aa		11.86	□□□□□ -0.51
RDM1-225	ENST00000619368	DDX21	Q9NR30	783 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
RDM1-225	ENST00000619368	TRIM35	Q9UPQ4	493 aa		11.86	□□□□□ -0.51
RDM1-225	ENST00000619368	POLR2A	P24928	1970 aa	Known RBP	11.85	□□□□□ -0.51
RDM1-225	ENST00000619368	RASSF10	A6NK89	507 aa		11.85	□□□□□ -0.51
RDM1-225	ENST00000619368	BBOX1	O75936	387 aa		11.85	□□□□□ -0.51
RDM1-225	ENST00000619368	DEFB115	Q30KQ5	88 aa		11.85	□□□□□ -0.51
RDM1-225	ENST00000619368	HSP90AB3P	Q58FF7	597 aa		11.85	□□□□□ -0.51
RDM1-225	ENST00000619368	SP8	Q8IXZ3	490 aa		11.85	□□□□□ -0.51
RDM1-225	ENST00000619368	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.85	□□□□□ -0.51
RDM1-225	ENST00000619368	LAS1L	Q9Y4W2	734 aa	Known RBP	11.85	□□□□□ -0.51
RDM1-225	ENST00000619368	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.85	□□□□□ -0.51
RDM1-225	ENST00000619368	LRRC37A	A6NMS7	1700 aa		11.84	□□□□□ -0.51
RDM1-225	ENST00000619368	CXCL9	Q07325	125 aa		11.84	□□□□□ -0.51
RDM1-225	ENST00000619368	TMX4	Q9H1E5	349 aa	Predicted RBP	11.84	□□□□□ -0.51
RDM1-225	ENST00000619368	VPS33B	Q9H267	617 aa		11.84	□□□□□ -0.51
RDM1-225	ENST00000619368	WBP1L	Q9NX94	342 aa		11.84	□□□□□ -0.51
RDM1-225	ENST00000619368	CHPF2	Q9P2E5	772 aa		11.84	□□□□□ -0.51
RDM1-225	ENST00000619368	TRMT112	Q9UI30	125 aa	Known RBP	11.84	□□□□□ -0.51
RDM1-225	ENST00000619368	ZNRF3	Q9ULT6	936 aa		11.84	□□□□□ -0.51
RDM1-225	ENST00000619368	ABT1	Q9ULW3	272 aa	Known RBP	11.84	□□□□□ -0.51
RDM1-225	ENST00000619368	SH3TC1	Q8TE82	1336 aa		11.84	□□□□□ -0.51
RDM1-225	ENST00000619368	TRAF5	O00463	557 aa		11.83	□□□□□ -0.52
RDM1-225	ENST00000619368	DPP8	Q6V1X1	898 aa	Predicted RBP	11.83	□□□□□ -0.52
RDM1-225	ENST00000619368	USP50	Q70EL3	339 aa	Predicted RBP	11.83	□□□□□ -0.52
RDM1-225	ENST00000619368	MPND	Q8N594	471 aa		11.83	□□□□□ -0.52
RDM1-225	ENST00000619368	SUPT20H	Q8NEM7	779 aa		11.83	□□□□□ -0.52

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