RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 ZKSCAN1P17029 563 aaPredicted RBP17.79■□□□□ 0.44
SRRT-217ENST00000618411 HNRNPH2P55795 449 aaKnown RBP17.79■□□□□ 0.44
SRRT-217ENST00000618411 FHOD1Q9Y613 1164 aa17.79■□□□□ 0.44
SRRT-217ENST00000618411 CHD2O14647 1828 aaKnown RBP17.79■□□□□ 0.44
SRRT-217ENST00000618411 MAP3K5Q99683 1374 aa17.79■□□□□ 0.44
SRRT-217ENST00000618411 PTH1RQ03431 593 aa17.78■□□□□ 0.44
SRRT-217ENST00000618411 POLA2Q14181 598 aa17.78■□□□□ 0.44
SRRT-217ENST00000618411 CCDC30Q5VVM6 783 aa17.78■□□□□ 0.44
SRRT-217ENST00000618411 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.78■□□□□ 0.44
SRRT-217ENST00000618411 GIGYF1O75420 1035 aaPredicted RBP17.78■□□□□ 0.44
SRRT-217ENST00000618411 BICD2Q8TD16 824 aa17.78■□□□□ 0.44
SRRT-217ENST00000618411 TRMT1Q9NXH9 659 aaKnown RBP17.78■□□□□ 0.44
SRRT-217ENST00000618411 USP42Q9H9J4 1324 aaKnown RBP17.78■□□□□ 0.44
SRRT-217ENST00000618411 CRYBG1Q9Y4K1 1723 aa17.78■□□□□ 0.44
SRRT-217ENST00000618411 NECTIN1Q15223 517 aa17.77■□□□□ 0.44
SRRT-217ENST00000618411 PGBD1Q96JS3 809 aa17.77■□□□□ 0.44
SRRT-217ENST00000618411 GLRX3O76003 335 aaKnown RBP17.77■□□□□ 0.44
SRRT-217ENST00000618411 WAPLQ7Z5K2 1190 aa17.77■□□□□ 0.44
SRRT-217ENST00000618411 CPS1P31327 1500 aa17.77■□□□□ 0.43
SRRT-217ENST00000618411 CTAGE5O15320 804 aa17.77■□□□□ 0.43
SRRT-217ENST00000618411 TUBB4AP04350 444 aa17.77■□□□□ 0.43
SRRT-217ENST00000618411 GSDMDP57764 484 aa17.77■□□□□ 0.43
SRRT-217ENST00000618411 TTC41PQ6P2S7 1318 aa17.77■□□□□ 0.43
SRRT-217ENST00000618411 PXDNLA1KZ92 1463 aa17.76■□□□□ 0.43
SRRT-217ENST00000618411 ERCC6LQ2NKX8 1250 aa17.76■□□□□ 0.43
SRRT-217ENST00000618411 PPP1R42Q7Z4L9 355 aa17.76■□□□□ 0.43
SRRT-217ENST00000618411 USP16Q9Y5T5 823 aa17.76■□□□□ 0.43
SRRT-217ENST00000618411 PNMA6AP0CW24 399 aaPredicted RBP17.76■□□□□ 0.43
SRRT-217ENST00000618411 CLCN6P51797 869 aa17.76■□□□□ 0.43
SRRT-217ENST00000618411 ANKRD1Q15327 319 aa17.76■□□□□ 0.43
SRRT-217ENST00000618411 STX1AQ16623 288 aa17.76■□□□□ 0.43
SRRT-217ENST00000618411 TEX35Q5T0J7 233 aa17.76■□□□□ 0.43
SRRT-217ENST00000618411 CACNA1FO60840 1977 aa17.75■□□□□ 0.43
SRRT-217ENST00000618411 N4BP2Q86UW6 1770 aaPredicted RBP17.75■□□□□ 0.43
SRRT-217ENST00000618411 PSMA5P28066 241 aa17.75■□□□□ 0.43
SRRT-217ENST00000618411 CCDC93Q567U6 631 aa17.75■□□□□ 0.43
SRRT-217ENST00000618411 FILIP1Q7Z7B0 1213 aa17.75■□□□□ 0.43
SRRT-217ENST00000618411 WASLO00401 505 aaPredicted RBP17.75■□□□□ 0.43
SRRT-217ENST00000618411 SNW1Q13573 536 aaKnown RBP17.75■□□□□ 0.43
SRRT-217ENST00000618411 SETD1AO15047 1707 aaKnown RBP17.75■□□□□ 0.43
SRRT-217ENST00000618411 BECN2A8MW95 431 aa17.74■□□□□ 0.43
SRRT-217ENST00000618411 GTF3C6Q969F1 213 aa17.74■□□□□ 0.43
SRRT-217ENST00000618411 FEZ2Q9UHY8 353 aaPredicted RBP17.74■□□□□ 0.43
SRRT-217ENST00000618411 ITSN1Q15811 1721 aa17.74■□□□□ 0.43
SRRT-217ENST00000618411 PLA2G4AP47712 749 aa17.74■□□□□ 0.43
SRRT-217ENST00000618411 HSP90AB4PQ58FF6 505 aa17.74■□□□□ 0.43
SRRT-217ENST00000618411 LARP1Q6PKG0 1096 aaKnown RBP17.74■□□□□ 0.43
SRRT-217ENST00000618411 C11orf57Q6ZUT1 292 aaPredicted RBP17.74■□□□□ 0.43
SRRT-217ENST00000618411 ALDH8A1Q9H2A2 487 aaPredicted RBP17.74■□□□□ 0.43
SRRT-217ENST00000618411 MON2Q7Z3U7 1717 aa17.74■□□□□ 0.43
SRRT-217ENST00000618411 NPHP1O15259 732 aa17.73■□□□□ 0.43
SRRT-217ENST00000618411 OSBPL5Q9H0X9 879 aaPredicted RBP17.73■□□□□ 0.43
SRRT-217ENST00000618411 TPM4P67936 248 aa17.73■□□□□ 0.43
SRRT-217ENST00000618411 CREB3L3Q68CJ9 461 aa17.73■□□□□ 0.43
SRRT-217ENST00000618411 IMPACTQ9P2X3 320 aa17.73■□□□□ 0.43
SRRT-217ENST00000618411 ZRANB2O95218 330 aaKnown RBP eCLIP17.73■□□□□ 0.436e-11■■■■■ 26.8
SRRT-217ENST00000618411 MUM1L1Q5H9M0 696 aa17.73■□□□□ 0.43
SRRT-217ENST00000618411 TRIM34Q9BYJ4 488 aa17.73■□□□□ 0.43
SRRT-217ENST00000618411 ARGLU1Q9NWB6 273 aaPredicted RBP17.73■□□□□ 0.43
SRRT-217ENST00000618411 PSDA5PKW4 1024 aaPredicted RBP17.72■□□□□ 0.43
SRRT-217ENST00000618411 KCNJ6P48051 423 aa17.72■□□□□ 0.43
SRRT-217ENST00000618411 TXLNBQ8N3L3 684 aa17.72■□□□□ 0.43
SRRT-217ENST00000618411 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.72■□□□□ 0.431e-8■■■■□ 22
SRRT-217ENST00000618411 RBM8AQ9Y5S9 174 aaKnown RBP17.72■□□□□ 0.43
SRRT-217ENST00000618411 RAD51AP2Q09MP3 1159 aa17.72■□□□□ 0.43
SRRT-217ENST00000618411 PLCD3Q8N3E9 789 aa17.72■□□□□ 0.43
SRRT-217ENST00000618411 CFAP45Q9UL16 551 aa17.72■□□□□ 0.43
SRRT-217ENST00000618411 SRGAP3O43295 1099 aa17.71■□□□□ 0.43
SRRT-217ENST00000618411 MAP4K1Q92918 833 aa17.71■□□□□ 0.43
SRRT-217ENST00000618411 CCDC61Q9Y6R9 512 aa17.71■□□□□ 0.43
SRRT-217ENST00000618411 C3P01024 1663 aa17.71■□□□□ 0.43
SRRT-217ENST00000618411 FAM208AQ9UK61 1670 aaKnown RBP17.71■□□□□ 0.43
SRRT-217ENST00000618411 ATP8B1O43520 1251 aa17.71■□□□□ 0.43
SRRT-217ENST00000618411 ARHGAP29Q52LW3 1261 aa17.71■□□□□ 0.43
SRRT-217ENST00000618411 E4F1Q66K89 784 aaPredicted RBP17.71■□□□□ 0.43
SRRT-217ENST00000618411 DDX54Q8TDD1 881 aaKnown RBP17.71■□□□□ 0.43
SRRT-217ENST00000618411 NUDT16Q96DE0 195 aaKnown RBP17.71■□□□□ 0.43
SRRT-217ENST00000618411 ANO10Q9NW15 660 aa17.71■□□□□ 0.43
SRRT-217ENST00000618411 RGPD1P0DJD0 1748 aa17.71■□□□□ 0.43
SRRT-217ENST00000618411 DHX8Q14562 1220 aaKnown RBP17.7■□□□□ 0.42
SRRT-217ENST00000618411 MTHFSDQ2M296 383 aaKnown RBP17.7■□□□□ 0.42
SRRT-217ENST00000618411 TMCO3Q6UWJ1 677 aa17.7■□□□□ 0.42
SRRT-217ENST00000618411 DHX40Q8IX18 779 aaKnown RBP17.7■□□□□ 0.42
SRRT-217ENST00000618411 BLOC1S2Q6QNY1 142 aa17.7■□□□□ 0.42
SRRT-217ENST00000618411 ADCY9O60503 1353 aa17.7■□□□□ 0.42
SRRT-217ENST00000618411 FOXO3O43524 673 aa17.69■□□□□ 0.42
SRRT-217ENST00000618411 RESTQ13127 1097 aa17.69■□□□□ 0.42
SRRT-217ENST00000618411 SYT10Q6XYQ8 523 aa17.69■□□□□ 0.42
SRRT-217ENST00000618411 PPP1R13BQ96KQ4 1090 aa17.69■□□□□ 0.42
SRRT-217ENST00000618411 ZSCAN16Q9H4T2 348 aaPredicted RBP17.69■□□□□ 0.42
SRRT-217ENST00000618411 STAG3Q9UJ98 1225 aa17.69■□□□□ 0.42
SRRT-217ENST00000618411 CCDC150Q8NCX0 1101 aa17.69■□□□□ 0.42
SRRT-217ENST00000618411 EVI5LQ96CN4 794 aa17.69■□□□□ 0.42
SRRT-217ENST00000618411 TRERF1Q96PN7 1200 aa17.69■□□□□ 0.42
SRRT-217ENST00000618411 ECHDC1Q9NTX5 307 aa17.69■□□□□ 0.42
SRRT-217ENST00000618411 SLC27A2O14975 620 aa17.68■□□□□ 0.42
SRRT-217ENST00000618411 UBXN4Q92575 508 aa17.68■□□□□ 0.42
SRRT-217ENST00000618411 RPS6KB1P23443 525 aa17.68■□□□□ 0.42
SRRT-217ENST00000618411 HSP90AB2PQ58FF8 381 aa17.68■□□□□ 0.42
SRRT-217ENST00000618411 CEP57L1Q8IYX8 460 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms