RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 KCNJ4P48050 445 aa10.74□□□□□ -0.69
VPS11-206ENST00000614944 ITPRIPQ8IWB1 547 aa10.74□□□□□ -0.69
VPS11-206ENST00000614944 SCN7AQ01118 1682 aa10.74□□□□□ -0.69
VPS11-206ENST00000614944 GNAI3P08754 354 aa10.74□□□□□ -0.69
VPS11-206ENST00000614944 SLC4A3P48751 1232 aa10.74□□□□□ -0.69
VPS11-206ENST00000614944 SLC39A6Q13433 755 aa10.74□□□□□ -0.69
VPS11-206ENST00000614944 RPAP2Q8IXW5 612 aaPredicted RBP10.74□□□□□ -0.69
VPS11-206ENST00000614944 BANK1Q8NDB2 785 aa10.74□□□□□ -0.69
VPS11-206ENST00000614944 ZNF526Q8TF50 670 aaPredicted RBP10.74□□□□□ -0.69
VPS11-206ENST00000614944 DYNC1I1O14576 645 aa10.73□□□□□ -0.69
VPS11-206ENST00000614944 LAMB2P55268 1798 aa10.73□□□□□ -0.69
VPS11-206ENST00000614944 BEND3Q5T5X7 828 aa10.73□□□□□ -0.69
VPS11-206ENST00000614944 DNAAF4Q8WXU2 420 aa10.73□□□□□ -0.69
VPS11-206ENST00000614944 SH3BP1Q9Y3L3 701 aa10.73□□□□□ -0.69
VPS11-206ENST00000614944 FSD2A1L4K1 749 aa10.73□□□□□ -0.69
VPS11-206ENST00000614944 FAM98CQ17RN3 349 aaKnown RBP10.72□□□□□ -0.69
VPS11-206ENST00000614944 STARD3NLO95772 234 aa10.72□□□□□ -0.69
VPS11-206ENST00000614944 FKBP5Q13451 457 aaPredicted RBP10.72□□□□□ -0.69
VPS11-206ENST00000614944 SMC5Q8IY18 1101 aa10.72□□□□□ -0.69
VPS11-206ENST00000614944 GPATCH11Q8N954 259 aa10.72□□□□□ -0.69
VPS11-206ENST00000614944 PLBD2Q8NHP8 589 aa10.72□□□□□ -0.69
VPS11-206ENST00000614944 ZBTB9Q96C00 473 aa10.72□□□□□ -0.69
VPS11-206ENST00000614944 HSP90AB3PQ58FF7 597 aa10.71□□□□□ -0.69
VPS11-206ENST00000614944 LINS1Q8NG48 757 aa10.71□□□□□ -0.69
VPS11-206ENST00000614944 PCDHB15Q9Y5E8 787 aa10.71□□□□□ -0.69
VPS11-206ENST00000614944 MRE11P49959 708 aa10.71□□□□□ -0.69
VPS11-206ENST00000614944 ANAPC15P60006 121 aa10.71□□□□□ -0.69
VPS11-206ENST00000614944 GCC1Q96CN9 775 aa10.71□□□□□ -0.69
VPS11-206ENST00000614944 USP16Q9Y5T5 823 aa10.71□□□□□ -0.69
VPS11-206ENST00000614944 CYP19A1P11511 503 aaPredicted RBP10.71□□□□□ -0.7
VPS11-206ENST00000614944 RBM6P78332 1123 aaKnown RBP10.71□□□□□ -0.7
VPS11-206ENST00000614944 ANKRD44Q8N8A2 993 aa10.71□□□□□ -0.7
VPS11-206ENST00000614944 METTL22Q9BUU2 404 aaPredicted RBP10.71□□□□□ -0.7
VPS11-206ENST00000614944 SRCIN1Q9C0H9 1055 aa10.71□□□□□ -0.7
VPS11-206ENST00000614944 PHAXQ9H814 394 aaKnown RBP10.71□□□□□ -0.7
VPS11-206ENST00000614944 TNS1Q9HBL0 1735 aaKnown RBP10.71□□□□□ -0.7
VPS11-206ENST00000614944 QSER1Q2KHR3 1735 aa10.7□□□□□ -0.7
VPS11-206ENST00000614944 UQCRHLA0A096LP55 91 aa10.7□□□□□ -0.7
VPS11-206ENST00000614944 UQCRHP07919 91 aa10.7□□□□□ -0.7
VPS11-206ENST00000614944 PRIM1P49642 420 aaKnown RBP10.7□□□□□ -0.7
VPS11-206ENST00000614944 TRIM28Q13263 835 aaKnown RBP10.7□□□□□ -0.7
VPS11-206ENST00000614944 MTX1Q13505 466 aa10.7□□□□□ -0.7
VPS11-206ENST00000614944 ASAP1Q9ULH1 1129 aa10.7□□□□□ -0.7
VPS11-206ENST00000614944 CNTNAP4Q9C0A0 1308 aa10.7□□□□□ -0.7
VPS11-206ENST00000614944 PALLDQ8WX93 1383 aa10.7□□□□□ -0.7
VPS11-206ENST00000614944 EIF2S2P20042 333 aaKnown RBP10.7□□□□□ -0.7
VPS11-206ENST00000614944 RC3H1Q5TC82 1133 aaKnown RBP10.7□□□□□ -0.7
VPS11-206ENST00000614944 QTRT2Q9H974 415 aaKnown RBP10.7□□□□□ -0.7
VPS11-206ENST00000614944 NUP98P52948 1817 aa10.7□□□□□ -0.7
VPS11-206ENST00000614944 PRAMEF22A3QJZ6 481 aa10.69□□□□□ -0.7
VPS11-206ENST00000614944 NBPF26B4DH59 902 aa10.69□□□□□ -0.7
VPS11-206ENST00000614944 IL6STP40189 918 aaPredicted RBP10.69□□□□□ -0.7
VPS11-206ENST00000614944 NBPF14Q5TI25 921 aa10.69□□□□□ -0.7
VPS11-206ENST00000614944 NBPF10Q6P3W6 841 aaKnown RBP10.69□□□□□ -0.7
VPS11-206ENST00000614944 NBPF15Q8N660 670 aa10.69□□□□□ -0.7
VPS11-206ENST00000614944 COL24A1Q17RW2 1714 aa10.69□□□□□ -0.7
VPS11-206ENST00000614944 LOC102724159A0A0B4J2E5 919 aa10.69□□□□□ -0.7
VPS11-206ENST00000614944 ERVV-1B6SEH8 477 aa10.69□□□□□ -0.7
VPS11-206ENST00000614944 IRF6O14896 467 aa10.69□□□□□ -0.7
VPS11-206ENST00000614944 PWP2Q15269 919 aaKnown RBP10.69□□□□□ -0.7
VPS11-206ENST00000614944 EP400NLQ6ZTU2 488 aa10.69□□□□□ -0.7
VPS11-206ENST00000614944 PROSER3Q2NL68 480 aa10.69□□□□□ -0.7
VPS11-206ENST00000614944 R3HCC1Q9Y3T6 440 aaKnown RBP10.69□□□□□ -0.7
VPS11-206ENST00000614944 PI4KAP2A4QPH2 592 aa10.68□□□□□ -0.7
VPS11-206ENST00000614944 TRIM6-TRIM34B2RNG4 842 aa10.68□□□□□ -0.7
VPS11-206ENST00000614944 GNAI2P04899 355 aa10.68□□□□□ -0.7
VPS11-206ENST00000614944 CBX1P83916 185 aa10.68□□□□□ -0.7
VPS11-206ENST00000614944 SEMA3FQ13275 785 aa10.68□□□□□ -0.7
VPS11-206ENST00000614944 PI4KAP1Q8N8J0 262 aa10.68□□□□□ -0.7
VPS11-206ENST00000614944 TRIM34Q9BYJ4 488 aa10.68□□□□□ -0.7
VPS11-206ENST00000614944 C4BP0C0L5 1744 aa10.68□□□□□ -0.7
VPS11-206ENST00000614944 IGHDP01880 384 aa10.68□□□□□ -0.7
VPS11-206ENST00000614944 SEPT12Q8IYM1 358 aa10.68□□□□□ -0.7
VPS11-206ENST00000614944 SLC4A9Q96Q91 983 aa10.68□□□□□ -0.7
VPS11-206ENST00000614944 FAM196AQ6ZSG2 479 aa10.68□□□□□ -0.7
VPS11-206ENST00000614944 ANKRD13DQ6ZTN6 518 aa10.68□□□□□ -0.7
VPS11-206ENST00000614944 USP44Q9H0E7 712 aa10.68□□□□□ -0.7
VPS11-206ENST00000614944 TSPYL1Q9H0U9 437 aa10.68□□□□□ -0.7
VPS11-206ENST00000614944 MAP3K2Q9Y2U5 619 aa10.68□□□□□ -0.7
VPS11-206ENST00000614944 CEP85Q6P2H3 762 aa10.67□□□□□ -0.7
VPS11-206ENST00000614944 MPNDQ8N594 471 aa10.67□□□□□ -0.7
VPS11-206ENST00000614944 XAGE3Q8WTP9 111 aa10.67□□□□□ -0.7
VPS11-206ENST00000614944 MYH14Q7Z406 1995 aaKnown RBP10.67□□□□□ -0.7
VPS11-206ENST00000614944 DCTPP1Q9H773 170 aa10.67□□□□□ -0.7
VPS11-206ENST00000614944 LOC102724428A0A0B4J2F2 783 aa10.66□□□□□ -0.7
VPS11-206ENST00000614944 HMMRO75330 724 aa10.66□□□□□ -0.7
VPS11-206ENST00000614944 SIK1P57059 783 aa10.66□□□□□ -0.7
VPS11-206ENST00000614944 ATP8B2P98198 1209 aa10.66□□□□□ -0.7
VPS11-206ENST00000614944 NEXNQ0ZGT2 675 aa10.66□□□□□ -0.7
VPS11-206ENST00000614944 POLA2Q14181 598 aa10.66□□□□□ -0.7
VPS11-206ENST00000614944 ZNF771Q7L3S4 317 aaPredicted RBP10.66□□□□□ -0.7
VPS11-206ENST00000614944 COPS6Q7L5N1 327 aa10.66□□□□□ -0.7
VPS11-206ENST00000614944 TUBGCP6Q96RT7 1819 aa10.66□□□□□ -0.7
VPS11-206ENST00000614944 C4AP0C0L4 1744 aa10.66□□□□□ -0.7
VPS11-206ENST00000614944 A0A087WZG4 1122 aa10.66□□□□□ -0.7
VPS11-206ENST00000614944 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.66□□□□□ -0.7
VPS11-206ENST00000614944 NEURL1BA8MQ27 555 aa10.66□□□□□ -0.7
VPS11-206ENST00000614944 F6X3S4 739 aa10.66□□□□□ -0.7
VPS11-206ENST00000614944 DNAJC10Q8IXB1 793 aa10.66□□□□□ -0.7
VPS11-206ENST00000614944 SIRT2Q8IXJ6 389 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms