RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 RPGRQ92834 1020 aaKnown RBP15.87■□□□□ 0.13
PDLIM2-218ENST00000614502 ABCC12Q96J65 1359 aa15.87■□□□□ 0.13
PDLIM2-218ENST00000614502 ADAMTSL1Q8N6G6 1762 aa15.86■□□□□ 0.13
PDLIM2-218ENST00000614502 GPTP24298 496 aa15.86■□□□□ 0.13
PDLIM2-218ENST00000614502 NEUROD2Q15784 382 aa15.86■□□□□ 0.13
PDLIM2-218ENST00000614502 HSP90AB3PQ58FF7 597 aa15.86■□□□□ 0.13
PDLIM2-218ENST00000614502 SLC51AQ86UW1 340 aa15.86■□□□□ 0.13
PDLIM2-218ENST00000614502 ZNF34Q8IZ26 560 aa15.86■□□□□ 0.13
PDLIM2-218ENST00000614502 TAF1DQ9H5J8 278 aaPredicted RBP15.86■□□□□ 0.13
PDLIM2-218ENST00000614502 CREBZFQ9NS37 354 aa15.86■□□□□ 0.13
PDLIM2-218ENST00000614502 RNF123Q5XPI4 1314 aa15.86■□□□□ 0.13
PDLIM2-218ENST00000614502 IQCA1LA6NCM1 817 aa15.85■□□□□ 0.13
PDLIM2-218ENST00000614502 NUTM1Q86Y26 1132 aa15.85■□□□□ 0.13
PDLIM2-218ENST00000614502 CCDC146Q8IYE0 955 aa15.85■□□□□ 0.13
PDLIM2-218ENST00000614502 RBM17Q96I25 401 aaKnown RBP15.85■□□□□ 0.13
PDLIM2-218ENST00000614502 L3MBTL3Q96JM7 780 aaPredicted RBP15.85■□□□□ 0.13
PDLIM2-218ENST00000614502 COL4A5P29400 1685 aa15.85■□□□□ 0.13
PDLIM2-218ENST00000614502 SNED1Q8TER0 1413 aa15.85■□□□□ 0.13
PDLIM2-218ENST00000614502 CHL1O00533 1208 aa15.84■□□□□ 0.13
PDLIM2-218ENST00000614502 HOXB7P09629 217 aa15.84■□□□□ 0.13
PDLIM2-218ENST00000614502 PDIA6Q15084 440 aa15.84■□□□□ 0.13
PDLIM2-218ENST00000614502 SUSD4Q5VX71 490 aa15.84■□□□□ 0.13
PDLIM2-218ENST00000614502 NLRP3Q96P20 1036 aa15.84■□□□□ 0.13
PDLIM2-218ENST00000614502 TMX4Q9H1E5 349 aaPredicted RBP15.84■□□□□ 0.13
PDLIM2-218ENST00000614502 PRKRIP1Q9H875 184 aaPredicted RBP15.84■□□□□ 0.13
PDLIM2-218ENST00000614502 UBN2Q6ZU65 1347 aa15.84■□□□□ 0.13
PDLIM2-218ENST00000614502 PASKQ96RG2 1323 aa15.84■□□□□ 0.13
PDLIM2-218ENST00000614502 NTSR2O95665 410 aa15.83■□□□□ 0.12
PDLIM2-218ENST00000614502 HOXA10P31260 410 aaPredicted RBP15.83■□□□□ 0.12
PDLIM2-218ENST00000614502 LDHDQ86WU2 507 aa15.83■□□□□ 0.12
PDLIM2-218ENST00000614502 CRAMP1Q96RY5 1269 aa15.83■□□□□ 0.12
PDLIM2-218ENST00000614502 PSMD1Q99460 953 aa15.83■□□□□ 0.12
PDLIM2-218ENST00000614502 UTP14AQ9BVJ6 771 aaKnown RBP15.83■□□□□ 0.12
PDLIM2-218ENST00000614502 DDX21Q9NR30 783 aaKnown RBP eCLIP15.83■□□□□ 0.12
PDLIM2-218ENST00000614502 ADAMTS8Q9UP79 889 aa15.83■□□□□ 0.12
PDLIM2-218ENST00000614502 LAS1LQ9Y4W2 734 aaKnown RBP15.83■□□□□ 0.12
PDLIM2-218ENST00000614502 IARSP41252 1262 aaKnown RBP15.82■□□□□ 0.12
PDLIM2-218ENST00000614502 EAPPQ56P03 285 aaPredicted RBP15.82■□□□□ 0.12
PDLIM2-218ENST00000614502 LRP10Q7Z4F1 713 aa15.82■□□□□ 0.12
PDLIM2-218ENST00000614502 SYNE4Q8N205 404 aa15.82■□□□□ 0.12
PDLIM2-218ENST00000614502 JDP2Q8WYK2 163 aa15.82■□□□□ 0.12
PDLIM2-218ENST00000614502 LTBP1Q14766 1721 aa15.82■□□□□ 0.12
PDLIM2-218ENST00000614502 ITGBL1O95965 494 aaPredicted RBP15.81■□□□□ 0.12
PDLIM2-218ENST00000614502 CNTNAP1P78357 1384 aa15.81■□□□□ 0.12
PDLIM2-218ENST00000614502 CALD1Q05682 793 aaKnown RBP15.81■□□□□ 0.12
PDLIM2-218ENST00000614502 SLC10A5Q5PT55 438 aa15.81■□□□□ 0.12
PDLIM2-218ENST00000614502 COPS6Q7L5N1 327 aa15.81■□□□□ 0.12
PDLIM2-218ENST00000614502 CFAP44Q96MT7 982 aa15.81■□□□□ 0.12
PDLIM2-218ENST00000614502 TRIM35Q9UPQ4 493 aa15.81■□□□□ 0.12
PDLIM2-218ENST00000614502 FZD9O00144 591 aa15.8■□□□□ 0.12
PDLIM2-218ENST00000614502 EPHX2P34913 555 aa15.8■□□□□ 0.12
PDLIM2-218ENST00000614502 HACL1Q9UJ83 578 aa15.8■□□□□ 0.12
PDLIM2-218ENST00000614502 LAMB2P55268 1798 aa15.8■□□□□ 0.12
PDLIM2-218ENST00000614502 PPEF1O14829 653 aaPredicted RBP15.79■□□□□ 0.12
PDLIM2-218ENST00000614502 FOXN1O15353 648 aa15.79■□□□□ 0.12
PDLIM2-218ENST00000614502 AIMP1Q12904 312 aaKnown RBP15.79■□□□□ 0.12
PDLIM2-218ENST00000614502 TCIRG1Q13488 830 aa15.79■□□□□ 0.12
PDLIM2-218ENST00000614502 PROSER3Q2NL68 480 aa15.79■□□□□ 0.12
PDLIM2-218ENST00000614502 HDGFL1Q5TGJ6 251 aa15.79■□□□□ 0.12
PDLIM2-218ENST00000614502 XAGE3Q8WTP9 111 aa15.79■□□□□ 0.12
PDLIM2-218ENST00000614502 NECTIN2Q92692 538 aa15.79■□□□□ 0.12
PDLIM2-218ENST00000614502 CHMP4AQ9BY43 222 aa15.79■□□□□ 0.12
PDLIM2-218ENST00000614502 VPS33BQ9H267 617 aa15.79■□□□□ 0.12
PDLIM2-218ENST00000614502 DBF4Q9UBU7 674 aaPredicted RBP15.79■□□□□ 0.12
PDLIM2-218ENST00000614502 ANXA1P04083 346 aa15.78■□□□□ 0.12
PDLIM2-218ENST00000614502 EIF6P56537 245 aaKnown RBP15.78■□□□□ 0.12
PDLIM2-218ENST00000614502 C3orf67Q6ZVT6 689 aa15.78■□□□□ 0.12
PDLIM2-218ENST00000614502 CLEC11AQ9Y240 323 aa15.78■□□□□ 0.12
PDLIM2-218ENST00000614502 TMEM88BA6NKF7 163 aa15.77■□□□□ 0.12
PDLIM2-218ENST00000614502 VEGFBP49765 207 aa15.77■□□□□ 0.12
PDLIM2-218ENST00000614502 MAP1SQ66K74 1059 aaPredicted RBP15.77■□□□□ 0.12
PDLIM2-218ENST00000614502 PNMA8AQ86V59 439 aaPredicted RBP15.77■□□□□ 0.12
PDLIM2-218ENST00000614502 NLRP10Q86W26 655 aa15.77■□□□□ 0.12
PDLIM2-218ENST00000614502 GPC2Q8N158 579 aa15.77■□□□□ 0.12
PDLIM2-218ENST00000614502 SUPT20HQ8NEM7 779 aa15.77■□□□□ 0.12
PDLIM2-218ENST00000614502 PLBD2Q8NHP8 589 aa15.77■□□□□ 0.12
PDLIM2-218ENST00000614502 HYPKQ9NX55 129 aa15.77■□□□□ 0.12
PDLIM2-218ENST00000614502 TAF1P21675 1872 aa15.76■□□□□ 0.11
PDLIM2-218ENST00000614502 SH3TC1Q8TE82 1336 aa15.76■□□□□ 0.11
PDLIM2-218ENST00000614502 TCERG1O14776 1098 aaKnown RBP15.76■□□□□ 0.11
PDLIM2-218ENST00000614502 BBOX1O75936 387 aa15.76■□□□□ 0.11
PDLIM2-218ENST00000614502 GNAI1P63096 354 aa15.76■□□□□ 0.11
PDLIM2-218ENST00000614502 CHPF2Q9P2E5 772 aa15.76■□□□□ 0.11
PDLIM2-218ENST00000614502 TRMT112Q9UI30 125 aaKnown RBP15.76■□□□□ 0.11
PDLIM2-218ENST00000614502 DUSP27Q5VZP5 1158 aa15.75■□□□□ 0.11
PDLIM2-218ENST00000614502 ANKRD13DQ6ZTN6 518 aa15.75■□□□□ 0.11
PDLIM2-218ENST00000614502 TMC4Q7Z404 712 aa15.75■□□□□ 0.11
PDLIM2-218ENST00000614502 CNTROBQ8N137 903 aa15.75■□□□□ 0.11
PDLIM2-218ENST00000614502 LARGE2Q8N3Y3 721 aa15.75■□□□□ 0.11
PDLIM2-218ENST00000614502 IFT57Q9NWB7 429 aa15.75■□□□□ 0.11
PDLIM2-218ENST00000614502 ATP6V0A2Q9Y487 856 aa15.75■□□□□ 0.11
PDLIM2-218ENST00000614502 GJA3Q9Y6H8 435 aa15.75■□□□□ 0.11
PDLIM2-218ENST00000614502 TRPM7Q96QT4 1865 aa15.75■□□□□ 0.11
PDLIM2-218ENST00000614502 APAF1O14727 1248 aa15.74■□□□□ 0.11
PDLIM2-218ENST00000614502 LMOD1P29536 600 aaPredicted RBP15.74■□□□□ 0.11
PDLIM2-218ENST00000614502 FMR1Q06787 632 aaKnown RBP eCLIP15.74■□□□□ 0.11
PDLIM2-218ENST00000614502 KRT24Q2M2I5 525 aa15.74■□□□□ 0.11
PDLIM2-218ENST00000614502 DDX46Q7L014 1031 aaKnown RBP15.74■□□□□ 0.11
PDLIM2-218ENST00000614502 NIM1KQ8IY84 436 aa15.74■□□□□ 0.11
PDLIM2-218ENST00000614502 MBIPQ9NS73 344 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms