RNA–Protein interactions for RNA: ENST00000614428.4

ACACA-231, Transcript of acetyl-CoA carboxylase alpha, human

APPRIS P1 TSL 1 (best) BASIC

Gene ACACA, Length 9,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-231	ENST00000614428	BRD1	O95696	1058 aa		7.78	□□□□□ -1.16
ACACA-231	ENST00000614428	LUC7L	Q9NQ29	371 aa	Known RBP	7.78	□□□□□ -1.16
ACACA-231	ENST00000614428	OVOS2	A0A0G2JMS6	1433 aa		7.78	□□□□□ -1.16
ACACA-231	ENST00000614428	HSPA4	P34932	840 aa		7.78	□□□□□ -1.16
ACACA-231	ENST00000614428	RFX7	Q2KHR2	1363 aa		7.78	□□□□□ -1.16
ACACA-231	ENST00000614428	ZNF165	P49910	485 aa		7.78	□□□□□ -1.16
ACACA-231	ENST00000614428	SYCP1	Q15431	976 aa		7.78	□□□□□ -1.16
ACACA-231	ENST00000614428	ZNF592	Q92610	1267 aa		7.78	□□□□□ -1.16
ACACA-231	ENST00000614428		V9GYY5	206 aa	Predicted RBP	7.78	□□□□□ -1.16
ACACA-231	ENST00000614428	ZFY	P08048	801 aa	Predicted RBP	7.77	□□□□□ -1.16
ACACA-231	ENST00000614428	TXLNA	P40222	546 aa		7.77	□□□□□ -1.16
ACACA-231	ENST00000614428	KANK3	Q6NY19	840 aa		7.77	□□□□□ -1.16
ACACA-231	ENST00000614428	PPP1R42	Q7Z4L9	355 aa		7.77	□□□□□ -1.16
ACACA-231	ENST00000614428	SMC2	O95347	1197 aa		7.77	□□□□□ -1.17
ACACA-231	ENST00000614428	FILIP1L	Q4L180	1135 aa		7.77	□□□□□ -1.17
ACACA-231	ENST00000614428	CCDC88A	Q3V6T2	1871 aa		7.77	□□□□□ -1.17
ACACA-231	ENST00000614428	MYH1	P12882	1939 aa		7.77	□□□□□ -1.17
ACACA-231	ENST00000614428	MYH4	Q9Y623	1939 aa		7.77	□□□□□ -1.17
ACACA-231	ENST00000614428	NACAP1	Q9BZK3	213 aa		7.77	□□□□□ -1.17
ACACA-231	ENST00000614428	CCDC158	Q5M9N0	1113 aa		7.77	□□□□□ -1.17
ACACA-231	ENST00000614428	BMP15	O95972	392 aa		7.77	□□□□□ -1.17
ACACA-231	ENST00000614428	EIF4A2	Q14240	407 aa	Known RBP	7.77	□□□□□ -1.17
ACACA-231	ENST00000614428	IMMT	Q16891	758 aa	Known RBP	7.77	□□□□□ -1.17
ACACA-231	ENST00000614428	KRT222	Q8N1A0	295 aa		7.77	□□□□□ -1.17
ACACA-231	ENST00000614428	RHPN1	Q8TCX5	695 aa		7.77	□□□□□ -1.17
ACACA-231	ENST00000614428	FMNL2	Q96PY5	1086 aa		7.77	□□□□□ -1.17
ACACA-231	ENST00000614428	MAP9	Q49MG5	647 aa		7.77	□□□□□ -1.17
ACACA-231	ENST00000614428	BRAP	Q7Z569	592 aa		7.77	□□□□□ -1.17
ACACA-231	ENST00000614428	PHACTR3	Q96KR7	559 aa		7.77	□□□□□ -1.17
ACACA-231	ENST00000614428	DMRT2	Q9Y5R5	561 aa		7.77	□□□□□ -1.17
ACACA-231	ENST00000614428	USP6	P35125	1406 aa		7.77	□□□□□ -1.17
ACACA-231	ENST00000614428	TUBGCP6	Q96RT7	1819 aa		7.77	□□□□□ -1.17
ACACA-231	ENST00000614428	USP48	Q86UV5	1035 aa		7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	EHBP1	Q8NDI1	1231 aa		7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	IMPACT	Q9P2X3	320 aa		7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	SLIT1	O75093	1534 aa		7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	C8orf58	Q8NAV2	365 aa		7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	THUMPD2	Q9BTF0	503 aa	Known RBP	7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	GABPB1	Q06547	395 aa	Predicted RBP	7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	STIM1	Q13586	685 aa		7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	AMOTL1	Q8IY63	956 aa		7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	LTV1	Q96GA3	475 aa	Predicted RBP	7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	SLC3A2	P08195	630 aa	Known RBP	7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	XPC	Q01831	940 aa	Predicted RBP	7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	FOXD4L3	Q6VB84	417 aa	Predicted RBP	7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	GJB2	P29033	226 aa		7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	ACE	P12821	1306 aa		7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	MEIS3	Q99687	375 aa		7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	SGSM2	O43147	1006 aa		7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	TTF1	Q15361	905 aa	Predicted RBP	7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	TMEM2	Q9UHN6	1383 aa		7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	TUBB2A	Q13885	445 aa		7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	RUFY3	Q7L099	469 aa		7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	CCDC83	Q8IWF9	413 aa		7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	ANKRD24	Q8TF21	1146 aa		7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	TUBB2B	Q9BVA1	445 aa		7.76	□□□□□ -1.17
ACACA-231	ENST00000614428	LEKR1	Q6ZMV7	388 aa		7.75	□□□□□ -1.17
ACACA-231	ENST00000614428	KDM4A	O75164	1064 aa		7.75	□□□□□ -1.17
ACACA-231	ENST00000614428	PRPF40B	Q6NWY9	871 aa	Known RBP	7.75	□□□□□ -1.17
ACACA-231	ENST00000614428	UBXN4	Q92575	508 aa		7.75	□□□□□ -1.17
ACACA-231	ENST00000614428	CDR1	P51861	262 aa		7.75	□□□□□ -1.17
ACACA-231	ENST00000614428	UBR1	Q8IWV7	1749 aa		7.75	□□□□□ -1.17
ACACA-231	ENST00000614428	PLEKHG3	A1L390	1219 aa		7.75	□□□□□ -1.17
ACACA-231	ENST00000614428	MYH11	P35749	1972 aa		7.75	□□□□□ -1.17
ACACA-231	ENST00000614428	TOPAZ1	Q8N9V7	1692 aa		7.75	□□□□□ -1.17
ACACA-231	ENST00000614428	TYRO3	Q06418	890 aa		7.75	□□□□□ -1.17
ACACA-231	ENST00000614428	LINS1	Q8NG48	757 aa		7.75	□□□□□ -1.17
ACACA-231	ENST00000614428	RRAGD	Q9NQL2	400 aa	Predicted RBP	7.75	□□□□□ -1.17
ACACA-231	ENST00000614428		A0A0G2JS52	829 aa		7.75	□□□□□ -1.17
ACACA-231	ENST00000614428	WAPL	Q7Z5K2	1190 aa		7.75	□□□□□ -1.17
ACACA-231	ENST00000614428	MYO6	Q9UM54	1294 aa		7.75	□□□□□ -1.17
ACACA-231	ENST00000614428	PLEKHG2	Q9H7P9	1386 aa		7.75	□□□□□ -1.17
ACACA-231	ENST00000614428	HCLS1	P14317	486 aa	Predicted RBP	7.75	□□□□□ -1.17
ACACA-231	ENST00000614428	TAT	P17735	454 aa	Predicted RBP	7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	KDR	P35968	1356 aa		7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	RIMBP3C	A6NJZ7	1639 aa		7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	RIMBP3B	A6NNM3	1639 aa		7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	RIMBP3	Q9UFD9	1639 aa		7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	CUL4A	Q13619	759 aa		7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	NFXL1	Q6ZNB6	911 aa		7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	KSR2	Q6VAB6	950 aa		7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	ZNHIT6	Q9NWK9	470 aa	Known RBP	7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	MYH9	P35579	1960 aa	Known RBP	7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	GNL3L	Q9NVN8	582 aa	Known RBP	7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	LAMA4	Q16363	1823 aa		7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	NAA16	Q6N069	864 aa	Predicted RBP	7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	TMCO3	Q6UWJ1	677 aa		7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	SPC24	Q8NBT2	197 aa		7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	RASSF8	Q8NHQ8	419 aa		7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	CTAGE1	Q96RT6	745 aa		7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	GRM8	O00222	908 aa		7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	KIF6	Q6ZMV9	814 aa		7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	PPFIBP1	Q86W92	1011 aa		7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	CDC25B	P30305	580 aa		7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	SSH3	Q8TE77	659 aa		7.74	□□□□□ -1.17
ACACA-231	ENST00000614428	HMGB2	P26583	209 aa	Known RBP	7.73	□□□□□ -1.17
ACACA-231	ENST00000614428	USP8	P40818	1118 aa		7.73	□□□□□ -1.17
ACACA-231	ENST00000614428	OGFR	Q9NZT2	677 aa		7.73	□□□□□ -1.17
ACACA-231	ENST00000614428	SERPINC1	P01008	464 aa		7.73	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms